RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 ATG4CQ96DT6 458 aa15.16■□□□□ 0.02
HIGD1A-205ENST00000470543 CRNKL1Q9BZJ0 848 aaKnown RBP15.16■□□□□ 0.02
HIGD1A-205ENST00000470543 CCDC8Q9H0W5 538 aaPredicted RBP15.16■□□□□ 0.02
HIGD1A-205ENST00000470543 MCM9Q9NXL9 1143 aa15.16■□□□□ 0.02
HIGD1A-205ENST00000470543 TLR7Q9NYK1 1049 aaKnown RBP15.16■□□□□ 0.02
HIGD1A-205ENST00000470543 CNPY2Q9Y2B0 182 aa15.16■□□□□ 0.02
HIGD1A-205ENST00000470543 MYO9BQ13459 2157 aa15.15■□□□□ 0.02
HIGD1A-205ENST00000470543 ROBO3Q96MS0 1386 aa15.15■□□□□ 0.02
HIGD1A-205ENST00000470543 A0A1W2PRG0 241 aa15.15■□□□□ 0.02
HIGD1A-205ENST00000470543 TRIM27P14373 513 aa15.15■□□□□ 0.02
HIGD1A-205ENST00000470543 ICA1Q05084 483 aa15.15■□□□□ 0.02
HIGD1A-205ENST00000470543 TMED8Q6PL24 325 aaPredicted RBP15.15■□□□□ 0.02
HIGD1A-205ENST00000470543 TMEM179Q6ZVK1 233 aa15.15■□□□□ 0.02
HIGD1A-205ENST00000470543 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
HIGD1A-205ENST00000470543 SLC44A5Q8NCS7 719 aa15.15■□□□□ 0.02
HIGD1A-205ENST00000470543 RAD21O60216 631 aa15.14■□□□□ 0.01
HIGD1A-205ENST00000470543 PGK2P07205 417 aa15.14■□□□□ 0.01
HIGD1A-205ENST00000470543 PPIGQ13427 754 aaKnown RBP eCLIP15.14■□□□□ 0.01
HIGD1A-205ENST00000470543 ATXN2LQ8WWM7 1075 aaKnown RBP15.14■□□□□ 0.01
HIGD1A-205ENST00000470543 LENG1Q96BZ8 264 aaPredicted RBP15.14■□□□□ 0.01
HIGD1A-205ENST00000470543 TINF2Q9BSI4 451 aa15.14■□□□□ 0.01
HIGD1A-205ENST00000470543 MROH7Q68CQ1 1323 aa15.14■□□□□ 0.01
HIGD1A-205ENST00000470543 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
HIGD1A-205ENST00000470543 WDR46O15213 610 aaKnown RBP15.13■□□□□ 0.01
HIGD1A-205ENST00000470543 BCAR3O75815 825 aa15.13■□□□□ 0.01
HIGD1A-205ENST00000470543 POLA2Q14181 598 aa15.13■□□□□ 0.01
HIGD1A-205ENST00000470543 ADAMTS19Q8TE59 1207 aa15.13■□□□□ 0.01
HIGD1A-205ENST00000470543 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.13■□□□□ 0.011e-6■□□□□ 8.5
HIGD1A-205ENST00000470543 PRDM12Q9H4Q4 367 aa15.13■□□□□ 0.01
HIGD1A-205ENST00000470543 TIMP1P01033 207 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 IGFBP4P22692 258 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 COPB2P35606 906 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 ACLYP53396 1101 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 GABPAQ06546 454 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 FAAP100Q0VG06 881 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 TMEM132BQ14DG7 1078 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 TTF1Q15361 905 aaPredicted RBP15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 CLEC10AQ8IUN9 316 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 AMOTL1Q8IY63 956 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 SSH3Q8TE77 659 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 VTI1AQ96AJ9 217 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 FAM122AQ96E09 287 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 TOX2Q96NM4 488 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 RIOK1Q9BRS2 568 aaKnown RBP15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 TSEN34Q9BSV6 310 aaKnown RBP15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 ANTXR1Q9H6X2 564 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 C1orf115Q9H7X2 142 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 VCPKMTQ9H867 229 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 SWAP70Q9UH65 585 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 RAPGEFL1Q9UHV5 662 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 ZHX1Q9UKY1 873 aaPredicted RBP15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 TNNQ9UQP3 1299 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 SYNRGQ9UMZ2 1314 aa15.12■□□□□ 0.01
HIGD1A-205ENST00000470543 MOXD2PA6NHM9 499 aa15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 TAL1P17542 331 aaPredicted RBP15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 MRPS5P82675 430 aaKnown RBP15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 CCDC85BQ15834 202 aaPredicted RBP15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 KIAA1755Q5JYT7 1200 aa15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 AKNAD1Q5T1N1 836 aa15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 ANKRD33Q7Z3H0 272 aa15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 TMEM199Q8N511 208 aa15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 GLT1D1Q96MS3 346 aa15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 ASB2Q96Q27 587 aa15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 UHRF1Q96T88 793 aaPredicted RBP15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 PBX4Q9BYU1 374 aa15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 MSRAQ9UJ68 235 aa15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 DIS3Q9Y2L1 958 aaKnown RBP15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
HIGD1A-205ENST00000470543 TLR3O15455 904 aaKnown RBP15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 ADAMTS4O75173 837 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 ATP8B2P98198 1209 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 RAB30Q15771 203 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 SLC9C2Q5TAH2 1124 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 MFSD5Q6N075 450 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 PSRC1Q6PGN9 363 aaPredicted RBP15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 AACSQ86V21 672 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 RIOX2Q8IUF8 465 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 TMEM57Q8N5G2 664 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 SDR42E1Q8WUS8 393 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 EAF2Q96CJ1 260 aaPredicted RBP15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 TSPYL2Q9H2G4 693 aaPredicted RBP15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 MTIF3Q9H2K0 278 aaKnown RBP15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 SPC25Q9HBM1 224 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 GOPCQ9HD26 462 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 FAM184BQ9ULE4 1060 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 TMX2Q9Y320 296 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 GBF1Q92538 1859 aa15.1■□□□□ 0.01
HIGD1A-205ENST00000470543 ZNF865P0CJ78 1059 aaPredicted RBP15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 CYP2D6P10635 497 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 AKR1B1P15121 316 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 PDE6AP16499 860 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 PLA2G5P39877 138 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 PBX2P40425 430 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 STAT3P40763 770 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 EVX2Q03828 476 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 KCNA10Q16322 511 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 ZNF792Q3KQV3 632 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 DYNLL2Q96FJ2 89 aa15.09■□□□□ 0.01
HIGD1A-205ENST00000470543 PPP1R12CQ9BZL4 782 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms