RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 ANTXR1Q9H6X2 564 aa11.1□□□□□ -0.63
CCDC171-204ENST00000470191 C1orf115Q9H7X2 142 aa11.1□□□□□ -0.63
CCDC171-204ENST00000470191 PHF24Q9UPV7 400 aa11.1□□□□□ -0.63
CCDC171-204ENST00000470191 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-204ENST00000470191 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-204ENST00000470191 RAD21O60216 631 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 FCER1AP12319 257 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 PBX2P40425 430 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 CLCN6P51797 869 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 RNF180Q86T96 592 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 TRMT2AQ8IZ69 625 aaKnown RBP11.09□□□□□ -0.63
CCDC171-204ENST00000470191 SLC44A5Q8NCS7 719 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 SHCBP1Q8NEM2 672 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 TIFAQ96CG3 184 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 GAS2L1Q99501 681 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-204ENST00000470191 MMP19Q99542 508 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 PRDM12Q9H4Q4 367 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 MROH8Q9H579 483 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 GPR108Q9NPR9 543 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 DBNLQ9UJU6 430 aaKnown RBP11.09□□□□□ -0.63
CCDC171-204ENST00000470191 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
CCDC171-204ENST00000470191 MAGEB6P1A0A0J9YX57 407 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 DCDC2CA8MYV0 355 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 APBB1O00213 710 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 KIAA0355O15063 1070 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
CCDC171-204ENST00000470191 CYP2D6P10635 497 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 TRIM27P14373 513 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 IGFBP4P22692 258 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 FAAP100Q0VG06 881 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 C1orf53Q5VUE5 145 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 VTI1AQ96AJ9 217 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC171-204ENST00000470191 MCM9Q9NXL9 1143 aa11.08□□□□□ -0.64
CCDC171-204ENST00000470191 CDH23Q9H251 3354 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 MCM3APO60318 1980 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-204ENST00000470191 ACRP10323 421 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-204ENST00000470191 MAP3K12Q12852 859 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 TMEM132BQ14DG7 1078 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 MB21D1Q8N884 522 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 SDR42E1Q8WUS8 393 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 ARHGAP45Q92619 1136 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 EAF2Q96CJ1 260 aaPredicted RBP11.07□□□□□ -0.64
CCDC171-204ENST00000470191 DYNLL2Q96FJ2 89 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 TINF2Q9BSI4 451 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 STARD7Q9NQZ5 370 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 FBXO28Q9NVF7 368 aa11.07□□□□□ -0.64
CCDC171-204ENST00000470191 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
CCDC171-204ENST00000470191 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 ACLYP53396 1101 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 CERS3Q8IU89 383 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 ABRAQ8N0Z2 381 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 MICALL1Q8N3F8 863 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 TMEM57Q8N5G2 664 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 IL27Q8NEV9 243 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 ADAMTS19Q8TE59 1207 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 ZNF512BQ96KM6 892 aaPredicted RBP11.06□□□□□ -0.64
CCDC171-204ENST00000470191 RIOK1Q9BRS2 568 aaKnown RBP11.06□□□□□ -0.64
CCDC171-204ENST00000470191 CRNKL1Q9BZJ0 848 aaKnown RBP11.06□□□□□ -0.64
CCDC171-204ENST00000470191 PPP1R12CQ9BZL4 782 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 ARHGEF10LQ9HCE6 1279 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 THEGQ9P2T0 379 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 SYNRGQ9UMZ2 1314 aa11.06□□□□□ -0.64
CCDC171-204ENST00000470191 MYADML2A6NDP7 307 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 SLC25A27O95847 323 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 TIMP1P01033 207 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 ZNF865P0CJ78 1059 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-204ENST00000470191 AKR1A1P14550 325 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 AKR1B1P15121 316 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 ATP8B2P98198 1209 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 ICA1Q05084 483 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 GABPAQ06546 454 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 KCTD2Q14681 263 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 KCNA10Q16322 511 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 TMEM179Q6ZVK1 233 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 SSH3Q8TE77 659 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 NUP133Q8WUM0 1156 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 ASB2Q96Q27 587 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 UHRF1Q96T88 793 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-204ENST00000470191 PBX4Q9BYU1 374 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 ZHX1Q9UKY1 873 aaPredicted RBP11.05□□□□□ -0.64
CCDC171-204ENST00000470191 CNPY2Q9Y2B0 182 aa11.05□□□□□ -0.64
CCDC171-204ENST00000470191 CYP2D7A0A087X1C5 515 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 SMIM22K7EJ46 135 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 ADAMTS4O75173 837 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 CSF2RAP15509 400 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 MRPS5P82675 430 aaKnown RBP11.04□□□□□ -0.64
CCDC171-204ENST00000470191 PPIGQ13427 754 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC171-204ENST00000470191 ZNF792Q3KQV3 632 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 TMEM240Q5SV17 173 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 SLC9C2Q5TAH2 1124 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 ZNF365Q70YC5 407 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 C16orf59Q7L2K0 433 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 AACSQ86V21 672 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 SIAH1Q8IUQ4 282 aa11.04□□□□□ -0.64
CCDC171-204ENST00000470191 LCORLQ8N3X6 602 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms