RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 GUCY1B3Q02153 619 aa8.09□□□□□ -1.11
KDM3A-210ENST00000470160 GPATCH4Q5T3I0 446 aaKnown RBP8.09□□□□□ -1.11
KDM3A-210ENST00000470160 CCDC148Q8NFR7 591 aa8.09□□□□□ -1.11
KDM3A-210ENST00000470160 PAPPA2Q9BXP8 1791 aa8.09□□□□□ -1.11
KDM3A-210ENST00000470160 PCDHA4Q9UN74 947 aa8.09□□□□□ -1.11
KDM3A-210ENST00000470160 SRPRBQ9Y5M8 271 aaKnown RBP8.09□□□□□ -1.11
KDM3A-210ENST00000470160 UBE2Q2LH0YL09 131 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 FZD9O00144 591 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 STXBP3O00186 592 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 NFKBIEO00221 500 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 PLA2G6O60733 806 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 PARP1P09874 1014 aaKnown RBP8.08□□□□□ -1.12
KDM3A-210ENST00000470160 STK38Q15208 465 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 SF3A1Q15459 793 aaKnown RBP8.08□□□□□ -1.12
KDM3A-210ENST00000470160 MAP3K11Q16584 847 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 TMEM179Q6ZVK1 233 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 KIAA0825Q8IV33 1275 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 CCAR1Q8IX12 1150 aaKnown RBP8.08□□□□□ -1.12
KDM3A-210ENST00000470160 DCAF4Q8WV16 495 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 PRMT6Q96LA8 375 aaPredicted RBP8.08□□□□□ -1.12
KDM3A-210ENST00000470160 GOLPH3LQ9H4A5 285 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 KANSL2Q9H9L4 492 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 BRMS1Q9HCU9 246 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 DACT1Q9NYF0 836 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 FBXO2Q9UK22 296 aaPredicted RBP8.08□□□□□ -1.12
KDM3A-210ENST00000470160 GOLGA6L4A6NEF3 574 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 DDTLA6NHG4 134 aaPredicted RBP8.08□□□□□ -1.12
KDM3A-210ENST00000470160 NR1I2O75469 434 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 ZNF543Q08ER8 600 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 HS1BP3Q53T59 392 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 BTNL9Q6UXG8 535 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 NIM1KQ8IY84 436 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 STAG2Q8N3U4 1231 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 LARGE2Q8N3Y3 721 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 CCDC12Q8WUD4 166 aaPredicted RBP8.08□□□□□ -1.12
KDM3A-210ENST00000470160 GMCL1Q96IK5 515 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 TAOK3Q9H2K8 898 aa8.08□□□□□ -1.12
KDM3A-210ENST00000470160 TNIP1Q15025 636 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 ARL6IP4Q66PJ3 421 aaKnown RBP8.07□□□□□ -1.12
KDM3A-210ENST00000470160 SIAH1Q8IUQ4 282 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 ZFPM1Q8IX07 1006 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 STK11IPQ8N1F8 1099 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 FERMT2Q96AC1 680 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 ZNF70Q9UC06 446 aaPredicted RBP8.07□□□□□ -1.12
KDM3A-210ENST00000470160 KLRF2D3W0D1 207 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 CCDC192P0DO97 292 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 CXCL9Q07325 125 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 CCDC173Q0VFZ6 552 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
KDM3A-210ENST00000470160 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
KDM3A-210ENST00000470160 CCDC73Q6ZRK6 1079 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 C4orf32Q8N8J7 132 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 BPIFA3Q9BQP9 254 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 FTOQ9C0B1 505 aaKnown RBP eCLIP8.07□□□□□ -1.12
KDM3A-210ENST00000470160 USP25Q9UHP3 1055 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 KCNJ14Q9UNX9 436 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 DOCK1Q14185 1865 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 PARP14Q460N5 1801 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 F8W031 263 aaPredicted RBP8.07□□□□□ -1.12
KDM3A-210ENST00000470160 LAD1O00515 517 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 ATP2C1P98194 919 aaPredicted RBP8.07□□□□□ -1.12
KDM3A-210ENST00000470160 SEMA3FQ13275 785 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 CIAPIN1Q6FI81 312 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 SHC4Q6S5L8 630 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 BLIDQ8IZY5 108 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 KRI1Q8N9T8 703 aaKnown RBP8.07□□□□□ -1.12
KDM3A-210ENST00000470160 OXER1Q8TDS5 423 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 TUBE1Q9UJT0 475 aa8.07□□□□□ -1.12
KDM3A-210ENST00000470160 NOL7Q9UMY1 257 aaKnown RBP8.07□□□□□ -1.12
KDM3A-210ENST00000470160 PRPHP41219 470 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 PICALMQ13492 652 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 NT5DC1Q5TFE4 455 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 WWC2Q6AWC2 1192 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 MCTP2Q6DN12 878 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 GLT8D2Q9H1C3 349 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 TNMDQ9H2S6 317 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 ZNF277Q9NRM2 450 aaPredicted RBP8.06□□□□□ -1.12
KDM3A-210ENST00000470160 RNF216Q9NWF9 866 aaPredicted RBP8.06□□□□□ -1.12
KDM3A-210ENST00000470160 VPS54Q9P1Q0 977 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 PHIPQ8WWQ0 1821 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 ME1P48163 572 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
KDM3A-210ENST00000470160 NR5A1Q13285 461 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 CERKLQ49MI3 558 aaPredicted RBP8.06□□□□□ -1.12
KDM3A-210ENST00000470160 CMTR1Q8N1G2 835 aaKnown RBP8.06□□□□□ -1.12
KDM3A-210ENST00000470160 FSIP1Q8NA03 581 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 BICD2Q8TD16 824 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 FBXW7Q969H0 707 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 RRP36Q96EU6 259 aaKnown RBP8.06□□□□□ -1.12
KDM3A-210ENST00000470160 PYM1Q9BRP8 204 aaKnown RBP8.06□□□□□ -1.12
KDM3A-210ENST00000470160 STX8Q9UNK0 236 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 PCDHAC2Q9Y5I4 1007 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 MRVI1Q9Y6F6 885 aa8.06□□□□□ -1.12
KDM3A-210ENST00000470160 TRIM75PA6NK02 468 aa8.05□□□□□ -1.12
KDM3A-210ENST00000470160 MDM2Q00987 491 aaPredicted RBP8.05□□□□□ -1.12
KDM3A-210ENST00000470160 DLGAP5Q15398 846 aa8.05□□□□□ -1.12
KDM3A-210ENST00000470160 CT47A1Q5JQC4 288 aaPredicted RBP8.05□□□□□ -1.12
KDM3A-210ENST00000470160 TYW1BQ6NUM6 668 aa8.05□□□□□ -1.12
KDM3A-210ENST00000470160 OGFOD1Q8N543 542 aa8.05□□□□□ -1.12
KDM3A-210ENST00000470160 SPATA20Q8TB22 786 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms