RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 NPLOC4Q8TAT6 608 aa16.14■□□□□ 0.17
LINC00173-201ENST00000470091 GDF15Q99988 308 aa16.14■□□□□ 0.17
LINC00173-201ENST00000470091 PFASO15067 1338 aa16.14■□□□□ 0.17
LINC00173-201ENST00000470091 USP17L12C9JPN9 530 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 USP17L21D6R901 530 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 MAGEA10P43363 369 aaPredicted RBP16.13■□□□□ 0.17
LINC00173-201ENST00000470091 PTH1RQ03431 593 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 LRRFIP1Q32MZ4 808 aaKnown RBP16.13■□□□□ 0.17
LINC00173-201ENST00000470091 LBX2Q6XYB7 198 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 KIAA1211Q6ZU35 1233 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 TMEM179Q6ZVK1 233 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 DPP9Q86TI2 863 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 TICAM2Q86XR7 235 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 SIAH1Q8IUQ4 282 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 MOV10L1Q9BXT6 1211 aaKnown RBP16.13■□□□□ 0.17
LINC00173-201ENST00000470091 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.13■□□□□ 0.17
LINC00173-201ENST00000470091 ATP8A2Q9NTI2 1148 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 SWAP70Q9UH65 585 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 CCDC171Q6TFL3 1326 aa16.13■□□□□ 0.17
LINC00173-201ENST00000470091 ALPK3Q96L96 1907 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 A0A1W2PPC1 479 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 M0R2C6 588 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 ZFYP08048 801 aaPredicted RBP16.12■□□□□ 0.17
LINC00173-201ENST00000470091 CDK8P49336 464 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 GRB14Q14449 540 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 LRRC26Q2I0M4 334 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 KIF2CQ99661 725 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 SENP6Q9GZR1 1112 aaPredicted RBP16.12■□□□□ 0.17
LINC00173-201ENST00000470091 ARHGEF10LQ9HCE6 1279 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 HELLSQ9NRZ9 838 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
LINC00173-201ENST00000470091 LAMA2P24043 3122 aaKnown RBP16.11■□□□□ 0.17
LINC00173-201ENST00000470091 RAD21O60216 631 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 FLOT1O75955 427 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 COL6A1P12109 1028 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 ERCC3P19447 782 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 MCCP23508 829 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 ICA1Q05084 483 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 C12orf60Q5U649 245 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 AMOTL1Q8IY63 956 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 STK11IPQ8N1F8 1099 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 TRPV1Q8NER1 839 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 APPBP2Q92624 585 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 SPATC1LQ9H0A9 340 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 COL6A3P12111 3177 aa16.11■□□□□ 0.17
LINC00173-201ENST00000470091 EPB41L2O43491 1005 aaKnown RBP16.1■□□□□ 0.17
LINC00173-201ENST00000470091 HOXC6P09630 235 aa16.1■□□□□ 0.17
LINC00173-201ENST00000470091 ADORA2AP29274 412 aa16.1■□□□□ 0.17
LINC00173-201ENST00000470091 DSG3P32926 999 aa16.1■□□□□ 0.17
LINC00173-201ENST00000470091 BMP8BP34820 402 aa16.1■□□□□ 0.17
LINC00173-201ENST00000470091 ATN1P54259 1190 aaPredicted RBP16.1■□□□□ 0.17
LINC00173-201ENST00000470091 ANO1Q5XXA6 986 aa16.1■□□□□ 0.17
LINC00173-201ENST00000470091 NCAPG2Q86XI2 1143 aa16.1■□□□□ 0.17
LINC00173-201ENST00000470091 OSBP2Q969R2 916 aa16.1■□□□□ 0.17
LINC00173-201ENST00000470091 ATG4CQ96DT6 458 aa16.1■□□□□ 0.17
LINC00173-201ENST00000470091 UBE2OQ9C0C9 1292 aaKnown RBP16.1■□□□□ 0.17
LINC00173-201ENST00000470091 PUS7LQ9H0K6 701 aaKnown RBP16.1■□□□□ 0.17
LINC00173-201ENST00000470091 DDX20Q9UHI6 824 aaKnown RBP16.1■□□□□ 0.17
LINC00173-201ENST00000470091 TMX2Q9Y320 296 aa16.1■□□□□ 0.17
LINC00173-201ENST00000470091 DDX60LQ5H9U9 1706 aaKnown RBP16.1■□□□□ 0.17
LINC00173-201ENST00000470091 STRNO43815 780 aa16.09■□□□□ 0.17
LINC00173-201ENST00000470091 COBLO75128 1261 aa16.09■□□□□ 0.17
LINC00173-201ENST00000470091 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
LINC00173-201ENST00000470091 EEF2P13639 858 aaKnown RBP16.09■□□□□ 0.17
LINC00173-201ENST00000470091 MDM2Q00987 491 aaPredicted RBP16.09■□□□□ 0.17
LINC00173-201ENST00000470091 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
LINC00173-201ENST00000470091 PRAMEF19Q5SWL8 479 aa16.09■□□□□ 0.17
LINC00173-201ENST00000470091 CCDC17Q96LX7 622 aa16.09■□□□□ 0.17
LINC00173-201ENST00000470091 VCPKMTQ9H867 229 aa16.09■□□□□ 0.17
LINC00173-201ENST00000470091 RBM8AQ9Y5S9 174 aaKnown RBP16.09■□□□□ 0.17
LINC00173-201ENST00000470091 NAV1Q8NEY1 1877 aa16.09■□□□□ 0.17
LINC00173-201ENST00000470091 HSPA4P34932 840 aa16.08■□□□□ 0.16
LINC00173-201ENST00000470091 GJC2Q5T442 439 aaPredicted RBP16.08■□□□□ 0.16
LINC00173-201ENST00000470091 CTR9Q6PD62 1173 aa16.08■□□□□ 0.16
LINC00173-201ENST00000470091 LPAR1Q92633 364 aa16.08■□□□□ 0.16
LINC00173-201ENST00000470091 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.16
LINC00173-201ENST00000470091 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
LINC00173-201ENST00000470091 FBXO28Q9NVF7 368 aa16.08■□□□□ 0.16
LINC00173-201ENST00000470091 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
LINC00173-201ENST00000470091 MB21D1Q8N884 522 aa16.07■□□□□ 0.16
LINC00173-201ENST00000470091 MROH8Q9H579 483 aa16.07■□□□□ 0.16
LINC00173-201ENST00000470091 BAZ2AQ9UIF9 1905 aaKnown RBP16.06■□□□□ 0.16
LINC00173-201ENST00000470091 MINDY4BA8MYZ0 360 aa16.06■□□□□ 0.16
LINC00173-201ENST00000470091 MSCO60682 206 aa16.06■□□□□ 0.16
LINC00173-201ENST00000470091 TMEM132BQ14DG7 1078 aa16.06■□□□□ 0.16
LINC00173-201ENST00000470091 VPS53Q5VIR6 699 aa16.06■□□□□ 0.16
LINC00173-201ENST00000470091 SHCBP1Q8NEM2 672 aa16.06■□□□□ 0.16
LINC00173-201ENST00000470091 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
LINC00173-201ENST00000470091 STRBPQ96SI9 672 aaKnown RBP16.06■□□□□ 0.16
LINC00173-201ENST00000470091 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
LINC00173-201ENST00000470091 SLC5A4Q9NY91 659 aa16.06■□□□□ 0.16
LINC00173-201ENST00000470091 WDR46O15213 610 aaKnown RBP16.05■□□□□ 0.16
LINC00173-201ENST00000470091 GPAA1O43292 621 aa16.05■□□□□ 0.16
LINC00173-201ENST00000470091 FCER1AP12319 257 aa16.05■□□□□ 0.16
LINC00173-201ENST00000470091 CYBAP13498 195 aa16.05■□□□□ 0.16
LINC00173-201ENST00000470091 ANAPC15P60006 121 aa16.05■□□□□ 0.16
LINC00173-201ENST00000470091 RABEP1Q15276 862 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms