RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 AIDAQ96BJ3 306 aa10.07□□□□□ -0.8
SMARCE1-207ENST00000469334 PURBQ96QR8 312 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-207ENST00000469334 MED15Q96RN5 788 aa10.07□□□□□ -0.8
SMARCE1-207ENST00000469334 NUP88Q99567 741 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-207ENST00000469334 TSGA10Q9BZW7 698 aa10.07□□□□□ -0.8
SMARCE1-207ENST00000469334 LIMA1Q9UHB6 759 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-207ENST00000469334 REXO2Q9Y3B8 237 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-207ENST00000469334 CCDC9Q9Y3X0 531 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-207ENST00000469334 A2ML1A8K2U0 1454 aa10.07□□□□□ -0.8
SMARCE1-207ENST00000469334 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 SOCS7O14512 581 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 ABLIM1O14639 778 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 ENC1O14682 589 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 FOXO3O43524 673 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 MYO1EQ12965 1108 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 PDIA5Q14554 519 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 OTUD7BQ6GQQ9 843 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 LRIG3Q6UXM1 1119 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 TEX9Q8N6V9 391 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 ZNF579Q8NAF0 562 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.06□□□□□ -0.84e-8■■■■■ 36.3
SMARCE1-207ENST00000469334 THOC1Q96FV9 657 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 ALS2CR12Q96Q35 445 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 NUP58Q9BVL2 599 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 SENP2Q9HC62 589 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 PA2G4Q9UQ80 394 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 MST1RQ04912 1400 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 UTYO14607 1347 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 WASLO00401 505 aaPredicted RBP10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 PDE2AO00408 941 aaPredicted RBP10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 CPLX1O14810 134 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 TRAPPC3O43617 180 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 SETSIPP0DME0 302 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 KRT9P35527 623 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 CYLC1P35663 651 aaPredicted RBP10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 CUL4BQ13620 913 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 KIAA0753Q2KHM9 967 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 ACCSLQ4AC99 568 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 VPS37DQ86XT2 251 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 IFT20Q8IY31 132 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 HVCN1Q96D96 273 aa10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 TLR7Q9NYK1 1049 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 C9orf78Q9NZ63 289 aaPredicted RBP10.06□□□□□ -0.8
SMARCE1-207ENST00000469334 IGSF1Q8N6C5 1336 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 PI4KAP2A4QPH2 592 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 A6NHS1 94 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 GOLGA6L10A6NI86 522 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 LRRC10BA6NIK2 292 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 ZNF233A6NK53 670 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 SRGAP2O75044 1071 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 CDKL5O76039 1030 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 ALADP13716 330 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 IDEP14735 1019 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 TCP1P17987 556 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 PAPOLAP51003 745 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 SEC24CP53992 1094 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 HERVK_113P62684 666 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 TBC1D25Q3MII6 688 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 PI4KAP1Q8N8J0 262 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 WHAMMQ8TF30 809 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 CCT6BQ92526 530 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 STAMBPL1Q96FJ0 436 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 SEC16BQ96JE7 1060 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 L3MBTL3Q96JM7 780 aaPredicted RBP10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 CCDC43Q96MW1 224 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 DNAJC7Q99615 494 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 CHCHD3Q9NX63 227 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 BAIAP2L1Q9UHR4 511 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 SNX12Q9UMY4 172 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 ZBTB12Q9Y330 459 aaPredicted RBP10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 RPS6KL1Q9Y6S9 549 aa10.05□□□□□ -0.8
SMARCE1-207ENST00000469334 ENO4A6NNW6 628 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 SH2B2O14492 632 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 PPIP5K2O43314 1243 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 ANP32DO95626 131 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 LMNB2Q03252 620 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 BIRC3Q13489 604 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 CCDC181Q5TID7 509 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 GKAP1Q5VSY0 366 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 HAUS3Q68CZ6 603 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 KCTD16Q68DU8 428 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 SDCCAG8Q86SQ7 713 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 KIRREL3Q8IZU9 778 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 DTNBP1Q96EV8 351 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 LRRC1Q9BTT6 524 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 DMGDHQ9UI17 866 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 LEMD3Q9Y2U8 911 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 PIK3C2AO00443 1686 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 FLT4P35916 1363 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 NEO1Q92859 1461 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 GOLGA6L10A0A0M3HER8 536 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 GOLGA8BA8MQT2 603 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 PDLIM1O00151 329 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 IFIT3O14879 490 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 N4BP3O15049 544 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 FOXN1O15353 648 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 PPFIA2O75334 1257 aa10.04□□□□□ -0.8
SMARCE1-207ENST00000469334 KRT14P02533 472 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms