RNA–Protein interactions for RNA: ENST00000469190.1

PLXNB3-205, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 626 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-205ENST00000469190 RBM27Q9P2N5 1060 aaKnown RBP16.53■□□□□ 0.24
PLXNB3-205ENST00000469190 TMX2Q9Y320 296 aa16.53■□□□□ 0.24
PLXNB3-205ENST00000469190 UBE2Q2LH0YL09 131 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 NDUFB10O96000 172 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 F13A1P00488 732 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 XBP1P17861 261 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 TTLL12Q14166 644 aaPredicted RBP16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 ZYXQ15942 572 aaKnown RBP16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 MCTP1Q6DN14 999 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 KCTD1Q719H9 257 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 ZKSCAN4Q969J2 545 aaPredicted RBP16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 KLRG1Q96E93 195 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 GBP4Q96PP9 640 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 UBA5Q9GZZ9 404 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 CPVLQ9H3G5 476 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 AS3MTQ9HBK9 375 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 VAT1LQ9HCJ6 419 aa16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.52■□□□□ 0.24
PLXNB3-205ENST00000469190 USP2O75604 605 aaPredicted RBP16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 POTEIP0CG38 1075 aa16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 POTEJP0CG39 1038 aa16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 IREB2P48200 963 aaKnown RBP16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 MAP1SQ66K74 1059 aaPredicted RBP16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 FERMT3Q86UX7 667 aa16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 RRP36Q96EU6 259 aaKnown RBP16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 SPZ1Q9BXG8 430 aa16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 ATP6V1DQ9Y5K8 247 aa16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 ATAD5Q96QE3 1844 aa16.51■□□□□ 0.23
PLXNB3-205ENST00000469190 BMP3P12645 472 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 SMARCA1P28370 1054 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 GNL2Q13823 731 aaKnown RBP16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 FOXD4L6Q3SYB3 417 aaPredicted RBP16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 KRT40Q6A162 431 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 FOXD4L3Q6VB84 417 aaPredicted RBP16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 LDHDQ86WU2 507 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 HOMER1Q86YM7 354 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 SPICE1Q8N0Z3 855 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 FBXO18Q8NFZ0 1043 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 VCPKMTQ9H867 229 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 NMRK2Q9NPI5 230 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 GJB4Q9NTQ9 266 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 SEC63Q9UGP8 760 aaKnown RBP16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 CSADQ9Y600 493 aa16.5■□□□□ 0.23
PLXNB3-205ENST00000469190 SCG2P13521 617 aa16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 PTPRAP18433 802 aa16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 SLC16A2P36021 539 aa16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 DOCK1Q14185 1865 aa16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 SAFBQ15424 915 aaKnown RBP eCLIP16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 PKN1Q16512 942 aa16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 NOL9Q5SY16 702 aaKnown RBP16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 TTBK2Q6IQ55 1244 aa16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
PLXNB3-205ENST00000469190 CYTH3O43739 400 aa16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 RESTQ13127 1097 aa16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 SLC35G1Q2M3R5 365 aa16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 ARMC9Q7Z3E5 817 aa16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 RGS22Q8NE09 1264 aa16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 PIGSQ96S52 555 aa16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 ZSCAN16Q9H4T2 348 aaPredicted RBP16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 RIOX1Q9H6W3 641 aa16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 ZNF408Q9H9D4 720 aa16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 ZHX2Q9Y6X8 837 aa16.48■□□□□ 0.23
PLXNB3-205ENST00000469190 MYH6P13533 1939 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 USP17L10C9JJH3 530 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 TMEM232C9JQI7 657 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 BAG4O95429 457 aaKnown RBP16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 USP14P54578 494 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 SPP2Q13103 211 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 VGLL4Q14135 290 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 FAM83BQ5T0W9 1011 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 ADGRF4Q8IZF3 695 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 ZNF280CQ8ND82 737 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 WDR18Q9BV38 432 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 KIAA1683Q9H0B3 1180 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 KCNJ14Q9UNX9 436 aa16.47■□□□□ 0.23
PLXNB3-205ENST00000469190 BAZ2BQ9UIF8 2168 aaKnown RBP16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 TRIM75PA6NK02 468 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 TRAF5O00463 557 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 NCLP19338 710 aaKnown RBP16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 MTMR2Q13614 643 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 KIAA1755Q5JYT7 1200 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 SYDE2Q5VT97 1194 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 MOB2Q70IA6 237 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 ANKRD13AQ8IZ07 590 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 GPKOWQ92917 476 aaPredicted RBP eCLIP16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 SNCAIPQ9Y6H5 919 aa16.46■□□□□ 0.23
PLXNB3-205ENST00000469190 MMP1P03956 469 aa16.45■□□□□ 0.22
PLXNB3-205ENST00000469190 STAT2P52630 851 aa16.45■□□□□ 0.22
PLXNB3-205ENST00000469190 NLRP5P59047 1200 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms