RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 HOXC6P09630 235 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 STAT3P40763 770 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 PDE4BQ07343 736 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 HDAC1Q13547 482 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 TMEM132BQ14DG7 1078 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 LHX8Q68G74 356 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 C7orf61Q8IZ16 206 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 SHCBP1Q8NEM2 672 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 SLC5A4Q9NY91 659 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 NYAP2Q9P242 653 aa12.68□□□□□ -0.38
TGFBR3-205ENST00000468996 VWA5AO00534 786 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 TSPY3P0CV98 308 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 TSPY8P0CW00 308 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 FCER1AP12319 257 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 PDE1AP54750 535 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 FAM47AQ5JRC9 791 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 PRAMEF19Q5SWL8 479 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 CHMP4CQ96CF2 233 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 EVI5LQ96CN4 794 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 RWDD1Q9H446 243 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 STAP2Q9UGK3 403 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 ISY1Q9ULR0 285 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 CTDP1Q9Y5B0 961 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 PLXNB2O15031 1838 aa12.67□□□□□ -0.38
TGFBR3-205ENST00000468996 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 SLC25A27O95847 323 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 NDUFB10O96000 172 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 TFAP4Q01664 338 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 PPARAQ07869 468 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 ANO1Q5XXA6 986 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 CEP95Q96GE4 821 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 MMP19Q99542 508 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 SLF1Q9BQI6 1058 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 LNPKQ9C0E8 428 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 INCENPQ9NQS7 918 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 MTMR4Q9NYA4 1195 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 DDX20Q9UHI6 824 aaKnown RBP12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 PPP1R9AQ9ULJ8 1098 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 ADAMTS5Q9UNA0 930 aa12.66□□□□□ -0.38
TGFBR3-205ENST00000468996 TTLL1O95922 423 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 PGK2P07205 417 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 SYN1P17600 705 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 FXR1P51114 621 aaKnown RBP eCLIP12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 CTDSPL2Q05D32 466 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 KCTD2Q14681 263 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 OLFML2BQ68BL8 750 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 RIOX2Q8IUF8 465 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 CPXCR1Q8N123 301 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 PRPF38AQ8NAV1 312 aaKnown RBP12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 TRPV1Q8NER1 839 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 RILPL2Q969X0 211 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 KIFC2Q96AC6 838 aa12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 SENP6Q9GZR1 1112 aaPredicted RBP12.65□□□□□ -0.38
TGFBR3-205ENST00000468996 SALL3Q9BXA9 1300 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 MYH7P12883 1935 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 IGKV6D-41A0A0C4DH26 115 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 MSCO60682 206 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 ZBED4O75132 1171 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 AAMPQ13685 434 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 VPS53Q5VIR6 699 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 ABRAQ8N0Z2 381 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 NEDD1Q8NHV4 660 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 EXOC6Q8TAG9 804 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 MKL1Q969V6 931 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 HELLSQ9NRZ9 838 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 ROBO3Q96MS0 1386 aa12.64□□□□□ -0.39
TGFBR3-205ENST00000468996 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 IGHDP01880 384 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 GJC2Q5T442 439 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 SLFN13Q68D06 897 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 DDX11Q96FC9 970 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 MAML3Q96JK9 1138 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 TOMM22Q9NS69 142 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 ZNF214Q9UL59 606 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 STX8Q9UNK0 236 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 MTMR7Q9Y216 660 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 RIPK3Q9Y572 518 aa12.63□□□□□ -0.39
TGFBR3-205ENST00000468996 PFASO15067 1338 aa12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 MYH8P13535 1937 aa12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 TMEM232C9JQI7 657 aa12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 FOXP2O15409 715 aa12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 COL6A1P12109 1028 aa12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 BMP3P12645 472 aa12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 CYBAP13498 195 aa12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 MCCP23508 829 aa12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 IKQ13123 557 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 LRRC26Q2I0M4 334 aa12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 RRP12Q5JTH9 1297 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-205ENST00000468996 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms