RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 GDNFP39905 211 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 AFMP43652 599 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 GJA8P48165 433 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 SOX9P48436 509 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 EIF6P56537 245 aaKnown RBP6.39□□□□□ -1.39
GPNMB-207ENST00000468723 UNC5AQ6ZN44 842 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 CCDC144CPQ8IYA2 1237 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 RBBP8NLQ8NC74 664 aaPredicted RBP6.39□□□□□ -1.39
GPNMB-207ENST00000468723 CPLX3Q8WVH0 158 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 TCTN2Q96GX1 697 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 SPATA32Q96LK8 384 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 TM9SF2Q99805 663 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 SRRTQ9BXP5 876 aaKnown RBP6.39□□□□□ -1.39
GPNMB-207ENST00000468723 HDAC8Q9BY41 377 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 GFOD1Q9NXC2 390 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 SUCOQ9UBS9 1254 aaKnown RBP6.39□□□□□ -1.39
GPNMB-207ENST00000468723 GUCY2CP25092 1073 aa6.38□□□□□ -1.39
GPNMB-207ENST00000468723 AUHQ13825 339 aaKnown RBP6.38□□□□□ -1.39
GPNMB-207ENST00000468723 KCNMB1Q16558 191 aa6.38□□□□□ -1.39
GPNMB-207ENST00000468723 PPFIBP1Q86W92 1011 aa6.38□□□□□ -1.39
GPNMB-207ENST00000468723 ZSWIM9Q86XI8 627 aa6.38□□□□□ -1.39
GPNMB-207ENST00000468723 USHBP1Q8N6Y0 703 aa6.38□□□□□ -1.39
GPNMB-207ENST00000468723 SYTL5Q8TDW5 730 aaPredicted RBP6.38□□□□□ -1.39
GPNMB-207ENST00000468723 KIRREL1Q96J84 757 aa6.38□□□□□ -1.39
GPNMB-207ENST00000468723 DHRS1Q96LJ7 313 aa6.38□□□□□ -1.39
GPNMB-207ENST00000468723 FOXP3Q9BZS1 431 aa6.38□□□□□ -1.39
GPNMB-207ENST00000468723 PCDHB12Q9Y5F1 795 aa6.38□□□□□ -1.39
GPNMB-207ENST00000468723 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.38□□□□□ -1.39
GPNMB-207ENST00000468723 SSU72P8A0A1W2PR75 194 aa6.37□□□□□ -1.39
GPNMB-207ENST00000468723 FKTNO75072 461 aa6.37□□□□□ -1.39
GPNMB-207ENST00000468723 RPL10P27635 214 aaKnown RBP6.37□□□□□ -1.39
GPNMB-207ENST00000468723 TRHRP34981 398 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-207ENST00000468723 PMS1P54277 932 aaKnown RBP6.37□□□□□ -1.39
GPNMB-207ENST00000468723 TEKQ02763 1124 aa6.37□□□□□ -1.39
GPNMB-207ENST00000468723 DCAF15Q66K64 600 aa6.37□□□□□ -1.39
GPNMB-207ENST00000468723 TAB3Q8N5C8 712 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-207ENST00000468723 DAGLBQ8NCG7 672 aa6.37□□□□□ -1.39
GPNMB-207ENST00000468723 ENOX1Q8TC92 643 aaKnown RBP6.37□□□□□ -1.39
GPNMB-207ENST00000468723 SYTL4Q96C24 671 aaPredicted RBP6.37□□□□□ -1.39
GPNMB-207ENST00000468723 CCDC120Q96HB5 630 aa6.37□□□□□ -1.39
GPNMB-207ENST00000468723 FMNL2Q96PY5 1086 aa6.37□□□□□ -1.39
GPNMB-207ENST00000468723 CAPN10Q9HC96 672 aa6.37□□□□□ -1.39
GPNMB-207ENST00000468723 LTBP3Q9NS15 1303 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 E9PSI1 815 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 SIGLEC6O43699 453 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 SYPP08247 313 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 ZGLP1P0C6A0 271 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 GIPRP48546 466 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 PPP2R5EQ16537 467 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 AXDND1Q5T1B0 1012 aaPredicted RBP6.36□□□□□ -1.39
GPNMB-207ENST00000468723 C7orf61Q8IZ16 206 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 ZNF655Q8N720 491 aaPredicted RBP6.36□□□□□ -1.39
GPNMB-207ENST00000468723 LIN37Q96GY3 246 aaPredicted RBP6.36□□□□□ -1.39
GPNMB-207ENST00000468723 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 C19orf44Q9H6X5 657 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 CHST7Q9NS84 486 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 TCFL5Q9UL49 500 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 PCDHB10Q9UN67 800 aa6.36□□□□□ -1.39
GPNMB-207ENST00000468723 RAC2P15153 192 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 TXKP42681 527 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 PCBP3P57721 371 aaKnown RBP6.35□□□□□ -1.39
GPNMB-207ENST00000468723 TMEM67Q5HYA8 995 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 OGFOD2Q6N063 350 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 ZPBP2Q6X784 338 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 WAPLQ7Z5K2 1190 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 ABHD4Q8TB40 342 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 MYLIPQ8WY64 445 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 BRF1Q92994 677 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 ANAPC16Q96DE5 110 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 SHDQ96IW2 340 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 SEC16BQ96JE7 1060 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 DSCC1Q9BVC3 393 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 EBF1Q9UH73 591 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 ZMYM5Q9UJ78 669 aa6.35□□□□□ -1.39
GPNMB-207ENST00000468723 A0A1W2PQH9 124 aa6.34□□□□□ -1.39
GPNMB-207ENST00000468723 ZNF503-AS2A6NEH8 195 aa6.34□□□□□ -1.39
GPNMB-207ENST00000468723 SHOXO15266 292 aa6.34□□□□□ -1.39
GPNMB-207ENST00000468723 ATF4P18848 351 aaPredicted RBP6.34□□□□□ -1.39
GPNMB-207ENST00000468723 GNPTABQ3T906 1256 aa6.34□□□□□ -1.39
GPNMB-207ENST00000468723 RNF111Q6ZNA4 994 aa6.34□□□□□ -1.39
GPNMB-207ENST00000468723 FAM169BQ8N8A8 192 aa6.34□□□□□ -1.39
GPNMB-207ENST00000468723 DHX38Q92620 1227 aaKnown RBP6.34□□□□□ -1.39
GPNMB-207ENST00000468723 KRTAP4-12Q9BQ66 201 aa6.34□□□□□ -1.39
GPNMB-207ENST00000468723 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.34□□□□□ -1.39
GPNMB-207ENST00000468723 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.33□□□□□ -1.4
GPNMB-207ENST00000468723 HPXP02790 462 aa6.33□□□□□ -1.4
GPNMB-207ENST00000468723 GLI1P08151 1106 aa6.33□□□□□ -1.4
GPNMB-207ENST00000468723 CTSKP43235 329 aa6.33□□□□□ -1.4
GPNMB-207ENST00000468723 MLANAQ16655 118 aa6.33□□□□□ -1.4
GPNMB-207ENST00000468723 BBS9Q3SYG4 887 aa6.33□□□□□ -1.4
GPNMB-207ENST00000468723 NOL9Q5SY16 702 aaKnown RBP6.33□□□□□ -1.4
GPNMB-207ENST00000468723 CRTC3Q6UUV7 619 aa6.33□□□□□ -1.4
GPNMB-207ENST00000468723 MPZL3Q6UWV2 235 aa6.33□□□□□ -1.4
GPNMB-207ENST00000468723 PDZD8Q8NEN9 1154 aa6.33□□□□□ -1.4
GPNMB-207ENST00000468723 ZNF214Q9UL59 606 aaPredicted RBP6.33□□□□□ -1.4
GPNMB-207ENST00000468723 MRVI1Q9Y6F6 885 aa6.33□□□□□ -1.4
GPNMB-207ENST00000468723 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 TMEM82A0PJX8 343 aa6.32□□□□□ -1.4
GPNMB-207ENST00000468723 LRRC10BA6NIK2 292 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms