RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PFKFB3Q16875 520 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-208ENST00000468300 KLHL40Q2TBA0 621 aa9.56□□□□□ -0.88
BRCA1-208ENST00000468300 KIF4BQ2VIQ3 1234 aa9.56□□□□□ -0.88
BRCA1-208ENST00000468300 EARS2Q5JPH6 523 aaKnown RBP9.56□□□□□ -0.88
BRCA1-208ENST00000468300 RBM26Q5T8P6 1007 aaKnown RBP9.56□□□□□ -0.88
BRCA1-208ENST00000468300 RASA3Q14644 834 aa9.56□□□□□ -0.88
BRCA1-208ENST00000468300 KIAA1755Q5JYT7 1200 aa9.56□□□□□ -0.88
BRCA1-208ENST00000468300 CTCFLQ8NI51 663 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-208ENST00000468300 LEO1Q8WVC0 666 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-208ENST00000468300 ZNF830Q96NB3 372 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-208ENST00000468300 USP28Q96RU2 1077 aa9.56□□□□□ -0.88
BRCA1-208ENST00000468300 NYAP2Q9P242 653 aa9.56□□□□□ -0.88
BRCA1-208ENST00000468300 KIF3AQ9Y496 699 aa9.56□□□□□ -0.88
BRCA1-208ENST00000468300 ELP1O95163 1332 aa9.56□□□□□ -0.88
BRCA1-208ENST00000468300 DOCK1Q14185 1865 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 M0R2N6 131 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 DDNO94850 711 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-208ENST00000468300 TOB1P50616 345 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-208ENST00000468300 NOM1Q5C9Z4 860 aaKnown RBP9.55□□□□□ -0.88
BRCA1-208ENST00000468300 CPLX2Q6PUV4 134 aaKnown RBP9.55□□□□□ -0.88
BRCA1-208ENST00000468300 MIGA2Q7L4E1 593 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 PGBD1Q96JS3 809 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 RIOX1Q9H6W3 641 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.55□□□□□ -0.88
BRCA1-208ENST00000468300 VPS54Q9P1Q0 977 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 ATP6V1DQ9Y5K8 247 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 BTBD18B2RXH4 712 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 FIBPO43427 364 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 GH2P01242 217 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 ABCB5Q2M3G0 1257 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 TMEM179Q6ZVK1 233 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 SPZ1Q9BXG8 430 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 TMOD2Q9NZR1 351 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 KLRF2D3W0D1 207 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 TRIM22Q8IYM9 498 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 RCOR1Q9UKL0 485 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 CLIC4Q9Y696 253 aa9.55□□□□□ -0.88
BRCA1-208ENST00000468300 FRMPD2Q68DX3 1309 aaPredicted RBP9.55□□□□□ -0.88
BRCA1-208ENST00000468300 MPHOSPH10O00566 681 aaKnown RBP9.54□□□□□ -0.88
BRCA1-208ENST00000468300 RRP9O43818 475 aaKnown RBP9.54□□□□□ -0.88
BRCA1-208ENST00000468300 SCG2P13521 617 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 SMARCA1P28370 1054 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 KIF5BP33176 963 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 ZNF543Q08ER8 600 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 NR5A1Q13285 461 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 MYSM1Q5VVJ2 828 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 TTBK2Q6IQ55 1244 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 MTMR8Q96EF0 704 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 KANSL2Q9H9L4 492 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 RNF181Q9P0P0 153 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 PARP14Q460N5 1801 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 WNT7AO00755 349 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 MYO1BO43795 1136 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
BRCA1-208ENST00000468300 KRT85P78386 507 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 C9orf131Q5VYM1 1079 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 WWC2Q6AWC2 1192 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 WASF1Q92558 559 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 RTEL1Q9NZ71 1219 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 TMEM63CQ9P1W3 806 aa9.54□□□□□ -0.88
BRCA1-208ENST00000468300 RBM27Q9P2N5 1060 aaKnown RBP9.54□□□□□ -0.88
BRCA1-208ENST00000468300 STXBP3O00186 592 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 PARP1P09874 1014 aaKnown RBP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 CAP2P40123 477 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 ECE1P42892 770 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 PTPAQ15257 358 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 BRAPQ7Z569 592 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 GMCL1P1Q8NEA9 526 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 UBA5Q9GZZ9 404 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 DEFB129Q9H1M3 183 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 FOXP1Q9H334 677 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 NASPP49321 788 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 SKOR2Q2VWA4 1001 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 NBPF12Q5TAG4 269 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 ANGEL2Q5VTE6 544 aaKnown RBP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 DIS3L2Q8IYB7 885 aaKnown RBP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 GPKOWQ92917 476 aaPredicted RBP eCLIP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 GLIS2Q9BZE0 524 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 ZBTB21Q9ULJ3 1066 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 GOLGA6L22H0YM25 854 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 ICA1Q05084 483 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 DLK2Q6UY11 383 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 NOSTRINQ8IVI9 506 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 LINC00301Q8NCQ3 95 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 ACER1Q8TDN7 264 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 PIBF1Q8WXW3 757 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 LZTS2Q9BRK4 669 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 JMJD4Q9H9V9 463 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
BRCA1-208ENST00000468300 DDX49Q9Y6V7 483 aaKnown RBP9.53□□□□□ -0.88
BRCA1-208ENST00000468300 WDR90Q96KV7 1748 aa9.52□□□□□ -0.88
BRCA1-208ENST00000468300 MYCNP04198 464 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-208ENST00000468300 GNAQP50148 359 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 UBE2HP62256 183 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 ASPRV1Q53RT3 343 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 ATL3Q6DD88 541 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 BARHL2Q9NY43 387 aa9.52□□□□□ -0.89
BRCA1-208ENST00000468300 VGLL3A8MV65 326 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms