RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ADAMTS5Q9UNA0 930 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 PLIN4Q96Q06 1357 aa20.33■□□□□ 0.84
SSBP1-207ENST00000468267 RAD21O60216 631 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 TSPY3P0CV98 308 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 TSPY8P0CW00 308 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 CAPN2P17655 700 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 SDSP20132 328 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 TFAP4Q01664 338 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 CTDSPL2Q05D32 466 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 MAP2K5Q13163 448 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 FAM47AQ5JRC9 791 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 FAM83BQ5T0W9 1011 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 PRPF38BQ5VTL8 546 aaKnown RBP20.32■□□□□ 0.84
SSBP1-207ENST00000468267 SHCBP1Q8NEM2 672 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 DEFB118Q96PH6 123 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 FBXO28Q9NVF7 368 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.32■□□□□ 0.84
SSBP1-207ENST00000468267 IVNS1ABPQ9Y6Y0 642 aa20.32■□□□□ 0.84
SSBP1-207ENST00000468267 ZNFX1Q9P2E3 1918 aaKnown RBP20.31■□□□□ 0.84
SSBP1-207ENST00000468267 RPTORQ8N122 1335 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 F5H6K3 240 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 TTLL1O95922 423 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 FGAP02671 866 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 HSPD1P10809 573 aaKnown RBP20.31■□□□□ 0.84
SSBP1-207ENST00000468267 KLRC3Q07444 240 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 GRB14Q14449 540 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 MAP3K21Q5TCX8 1036 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
SSBP1-207ENST00000468267 UBE2Q1Q7Z7E8 422 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 ZNF589Q86UQ0 364 aaPredicted RBP20.31■□□□□ 0.84
SSBP1-207ENST00000468267 APBA2Q99767 749 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.31■□□□□ 0.84
SSBP1-207ENST00000468267 HMX1Q9NP08 348 aaPredicted RBP20.31■□□□□ 0.84
SSBP1-207ENST00000468267 INCENPQ9NQS7 918 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 SYNPO2Q9UMS6 1093 aa20.31■□□□□ 0.84
SSBP1-207ENST00000468267 CCDC171Q6TFL3 1326 aa20.3■□□□□ 0.84
SSBP1-207ENST00000468267 STRNO43815 780 aa20.3■□□□□ 0.84
SSBP1-207ENST00000468267 NDUFB10O96000 172 aa20.3■□□□□ 0.84
SSBP1-207ENST00000468267 ZKSCAN1P17029 563 aaPredicted RBP20.3■□□□□ 0.84
SSBP1-207ENST00000468267 CCL14Q16627 93 aa20.3■□□□□ 0.84
SSBP1-207ENST00000468267 NUP88Q99567 741 aaPredicted RBP20.3■□□□□ 0.84
SSBP1-207ENST00000468267 CRISPLD2Q9H0B8 497 aa20.3■□□□□ 0.84
SSBP1-207ENST00000468267 PPP1R9AQ9ULJ8 1098 aa20.3■□□□□ 0.84
SSBP1-207ENST00000468267 TACC3Q9Y6A5 838 aa20.3■□□□□ 0.84
SSBP1-207ENST00000468267 VWA5AO00534 786 aa20.29■□□□□ 0.84
SSBP1-207ENST00000468267 TFRCP02786 760 aaKnown RBP20.29■□□□□ 0.84
SSBP1-207ENST00000468267 HOXC6P09630 235 aa20.29■□□□□ 0.84
SSBP1-207ENST00000468267 PRKAR2AP13861 404 aaKnown RBP20.29■□□□□ 0.84
SSBP1-207ENST00000468267 ERCC3P19447 782 aa20.29■□□□□ 0.84
SSBP1-207ENST00000468267 PDE4AP27815 886 aa20.29■□□□□ 0.84
SSBP1-207ENST00000468267 MFAP1P55081 439 aaKnown RBP20.29■□□□□ 0.84
SSBP1-207ENST00000468267 PLS1Q14651 629 aa20.29■□□□□ 0.84
SSBP1-207ENST00000468267 TMEM132BQ14DG7 1078 aa20.29■□□□□ 0.84
SSBP1-207ENST00000468267 MROH8Q9H579 483 aa20.29■□□□□ 0.84
SSBP1-207ENST00000468267 ZMYM6O95789 1325 aa20.28■□□□□ 0.84
SSBP1-207ENST00000468267 ORC4O43929 436 aa20.28■□□□□ 0.84
SSBP1-207ENST00000468267 FGRP09769 529 aa20.28■□□□□ 0.84
SSBP1-207ENST00000468267 CACNB2Q08289 660 aaPredicted RBP20.28■□□□□ 0.84
SSBP1-207ENST00000468267 GMCL1P1Q8NEA9 526 aa20.28■□□□□ 0.84
SSBP1-207ENST00000468267 SLF1Q9BQI6 1058 aa20.28■□□□□ 0.84
SSBP1-207ENST00000468267 ZNF236Q9UL36 1845 aa20.27■□□□□ 0.84
SSBP1-207ENST00000468267 HIP1O00291 1037 aa20.27■□□□□ 0.84
SSBP1-207ENST00000468267 SLC25A27O95847 323 aa20.27■□□□□ 0.84
SSBP1-207ENST00000468267 PPP4R3BQ5MIZ7 849 aa20.27■□□□□ 0.84
SSBP1-207ENST00000468267 NCAPG2Q86XI2 1143 aa20.27■□□□□ 0.84
SSBP1-207ENST00000468267 LRRC47Q8N1G4 583 aaKnown RBP20.27■□□□□ 0.84
SSBP1-207ENST00000468267 FLRT1Q9NZU1 646 aa20.27■□□□□ 0.84
SSBP1-207ENST00000468267 TSPY2A6NKD2 308 aa20.26■□□□□ 0.83
SSBP1-207ENST00000468267 RANBP6O60518 1105 aaKnown RBP20.26■□□□□ 0.83
SSBP1-207ENST00000468267 FARP2O94887 1054 aaPredicted RBP20.26■□□□□ 0.83
SSBP1-207ENST00000468267 ADORA2AP29274 412 aa20.26■□□□□ 0.83
SSBP1-207ENST00000468267 CWC27Q6UX04 472 aaKnown RBP20.26■□□□□ 0.83
SSBP1-207ENST00000468267 DPP9Q86TI2 863 aa20.26■□□□□ 0.83
SSBP1-207ENST00000468267 RIOX2Q8IUF8 465 aa20.26■□□□□ 0.83
SSBP1-207ENST00000468267 ABRAQ8N0Z2 381 aa20.26■□□□□ 0.83
SSBP1-207ENST00000468267 PRPF38AQ8NAV1 312 aaKnown RBP20.26■□□□□ 0.83
SSBP1-207ENST00000468267 REPS2Q8NFH8 660 aa20.26■□□□□ 0.83
SSBP1-207ENST00000468267 NPLOC4Q8TAT6 608 aa20.26■□□□□ 0.83
SSBP1-207ENST00000468267 IL17RBQ9NRM6 502 aa20.26■□□□□ 0.83
SSBP1-207ENST00000468267 DIAPH3Q9NSV4 1193 aa20.26■□□□□ 0.83
SSBP1-207ENST00000468267 STAT3P40763 770 aa20.25■□□□□ 0.83
SSBP1-207ENST00000468267 MFSD14CQ5VZR4 134 aa20.25■□□□□ 0.83
SSBP1-207ENST00000468267 SLFN13Q68D06 897 aa20.25■□□□□ 0.83
SSBP1-207ENST00000468267 FEM1BQ9UK73 627 aa20.25■□□□□ 0.83
SSBP1-207ENST00000468267 ZNF214Q9UL59 606 aaPredicted RBP20.25■□□□□ 0.83
SSBP1-207ENST00000468267 DNAH12Q6ZR08 3092 aa20.25■□□□□ 0.83
SSBP1-207ENST00000468267 NMT2O60551 498 aa20.24■□□□□ 0.83
SSBP1-207ENST00000468267 COBLO75128 1261 aa20.24■□□□□ 0.83
SSBP1-207ENST00000468267 IGHA2P01877 340 aa20.24■□□□□ 0.83
SSBP1-207ENST00000468267 FCER1AP12319 257 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 BMP3P12645 472 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 CCND3P30281 292 aaPredicted RBP20.23■□□□□ 0.83
SSBP1-207ENST00000468267 COPB2P35606 906 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 NOVP48745 357 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 HAND2P61296 217 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 TTC22Q5TAA0 569 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 ANKLE1Q8NAG6 615 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 GMCL1Q96IK5 515 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 NBPF3Q9H094 633 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 TOMM22Q9NS69 142 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms