RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 CTDNEP1O95476 244 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
RNF13-208ENST00000467996 GOLGA8HP0CJ92 632 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 KIF5BP33176 963 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 ADD1P35611 737 aaKnown RBP13.8□□□□□ -0.2
RNF13-208ENST00000467996 ZNF543Q08ER8 600 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 DGKZQ13574 1117 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 PPP2R5BQ15173 497 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 CCDC96Q2M329 555 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 ASPRV1Q53RT3 343 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 TMTC3Q6ZXV5 915 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 SPICE1Q8N0Z3 855 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 STAG2Q8N3U4 1231 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 OPTNQ96CV9 577 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 GMCL1Q96IK5 515 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 RLFQ13129 1914 aa13.8□□□□□ -0.2
RNF13-208ENST00000467996 CCDC196A0A1B0GTZ2 297 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 CPLX1O14810 134 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
RNF13-208ENST00000467996 DTNBO60941 627 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 HSP90AA1P07900 732 aaKnown RBP13.79□□□□□ -0.2
RNF13-208ENST00000467996 GJA5P36382 358 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 SLC1A4P43007 532 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 USP14P54578 494 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 BACE1P56817 501 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 PPIL2Q13356 520 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 CMTR1Q8N1G2 835 aaKnown RBP13.79□□□□□ -0.2
RNF13-208ENST00000467996 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 NSUN7Q8NE18 718 aaKnown RBP13.79□□□□□ -0.2
RNF13-208ENST00000467996 SLC10A4Q96EP9 437 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
RNF13-208ENST00000467996 C12orf42Q96LP6 360 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 NUP88Q99567 741 aaPredicted RBP13.79□□□□□ -0.2
RNF13-208ENST00000467996 LLPHQ9BRT6 129 aaKnown RBP13.79□□□□□ -0.2
RNF13-208ENST00000467996 CNTNAP5Q8WYK1 1306 aa13.79□□□□□ -0.2
RNF13-208ENST00000467996 COL11A1P12107 1806 aaPredicted RBP13.78□□□□□ -0.2
RNF13-208ENST00000467996 PTPDC1A2A3K4 754 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 C19orf81C9J6K1 198 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 IRF6O14896 467 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 JAK2O60674 1132 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 BMP3P12645 472 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 HMGCS2P54868 508 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 HUNKP57058 714 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 C1QTNF8P60827 252 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 NTRK3Q16288 839 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 SH3D19Q5HYK7 790 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 FAM83BQ5T0W9 1011 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 GPATCH4Q5T3I0 446 aaKnown RBP13.78□□□□□ -0.2
RNF13-208ENST00000467996 CPLX2Q6PUV4 134 aaKnown RBP13.78□□□□□ -0.2
RNF13-208ENST00000467996 KCTD1Q719H9 257 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 SAPCD2Q86UD0 394 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 SRBD1Q8N5C6 995 aaKnown RBP13.78□□□□□ -0.2
RNF13-208ENST00000467996 LPAR1Q92633 364 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 WNK4Q96J92 1243 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 GPCPD1Q9NPB8 672 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
RNF13-208ENST00000467996 ISY1Q9ULR0 285 aaKnown RBP13.78□□□□□ -0.2
RNF13-208ENST00000467996 KCNH4Q9UQ05 1017 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.78□□□□□ -0.2
RNF13-208ENST00000467996 A0A0G2JMZ2 1700 aa13.78□□□□□ -0.2
RNF13-208ENST00000467996 KLRF2D3W0D1 207 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 WDR46O15213 610 aaKnown RBP13.77□□□□□ -0.21
RNF13-208ENST00000467996 CDKL5O76039 1030 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 IFNAR1P17181 557 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 VCAM1P19320 739 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 GNAQP50148 359 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 FUT2Q10981 343 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 TTBK2Q6IQ55 1244 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 NBPF11Q86T75 865 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 SMARCC2Q8TAQ2 1214 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 PHKBQ93100 1093 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 CPVLQ9H3G5 476 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 TLL2Q9Y6L7 1015 aa13.77□□□□□ -0.21
RNF13-208ENST00000467996 STK36Q9NRP7 1315 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 A0A0G2JLL6 359 aaPredicted RBP13.76□□□□□ -0.21
RNF13-208ENST00000467996 TMEM88BA6NKF7 163 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 CXCL11O14625 94 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 CYTH3O43739 400 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 PPFIA3O75145 1194 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 PRRT2Q7Z6L0 340 aaPredicted RBP13.76□□□□□ -0.21
RNF13-208ENST00000467996 CCDC82Q8N4S0 544 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 LZTS2Q9BRK4 669 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 UBA5Q9GZZ9 404 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 SMC3Q9UQE7 1217 aa13.76□□□□□ -0.21
RNF13-208ENST00000467996 BAZ2BQ9UIF8 2168 aaKnown RBP13.76□□□□□ -0.21
RNF13-208ENST00000467996 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
RNF13-208ENST00000467996 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
RNF13-208ENST00000467996 ZBTB48P10074 688 aaPredicted RBP13.75□□□□□ -0.21
RNF13-208ENST00000467996 GJB2P29033 226 aa13.75□□□□□ -0.21
RNF13-208ENST00000467996 SLC16A2P36021 539 aa13.75□□□□□ -0.21
RNF13-208ENST00000467996 STAT2P52630 851 aa13.75□□□□□ -0.21
RNF13-208ENST00000467996 HMGN5P82970 282 aaKnown RBP13.75□□□□□ -0.21
RNF13-208ENST00000467996 SSRP1Q08945 709 aaKnown RBP13.75□□□□□ -0.21
RNF13-208ENST00000467996 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
RNF13-208ENST00000467996 RGMBQ6NW40 437 aa13.75□□□□□ -0.21
RNF13-208ENST00000467996 RASAL3Q86YV0 1011 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms