RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 CALM3P0DP25 149 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 COPB1P53618 953 aaKnown RBP16.4■□□□□ 0.22
SEC16A-208ENST00000467838 TROAPQ12815 778 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 FAM98CQ17RN3 349 aaKnown RBP16.4■□□□□ 0.22
SEC16A-208ENST00000467838 KIF4BQ2VIQ3 1234 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
SEC16A-208ENST00000467838 ACRBPQ8NEB7 543 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 GOLGA5Q8TBA6 731 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 GBP3Q9H0R5 595 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 PUF60Q9UHX1 559 aaKnown RBP16.4■□□□□ 0.22
SEC16A-208ENST00000467838 CNTNAP5Q8WYK1 1306 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 TMTC3Q6ZXV5 915 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 MIGA1Q8NAN2 632 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 CPLX3Q8WVH0 158 aa16.4■□□□□ 0.22
SEC16A-208ENST00000467838 SNAP23O00161 211 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 EIF3JO75822 258 aaKnown RBP16.39■□□□□ 0.21
SEC16A-208ENST00000467838 PLEKHA8P1O95397 391 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 BCAMP50895 628 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 PAK1Q13153 545 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 ZSCAN26Q16670 478 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 WDR93Q6P2C0 686 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 CATIPQ7Z7H3 387 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 CDC5LQ99459 802 aaKnown RBP16.39■□□□□ 0.21
SEC16A-208ENST00000467838 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
SEC16A-208ENST00000467838 BRIP1Q9BX63 1249 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 ZSWIM4Q9H7M6 989 aa16.39■□□□□ 0.21
SEC16A-208ENST00000467838 COL1A1P02452 1464 aaPredicted RBP16.39■□□□□ 0.21
SEC16A-208ENST00000467838 BAZ2AQ9UIF9 1905 aaKnown RBP16.39■□□□□ 0.21
SEC16A-208ENST00000467838 CTAGE15A4D2H0 777 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 N4BP3O15049 544 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 RPS6KA5O75582 802 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 CTAGE8P0CG41 777 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 TCP11X2Q5H9J9 407 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 CTAGE6Q86UF2 777 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 CTAGE4Q8IX94 777 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 MTRQ99707 1265 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 PDE11AQ9HCR9 933 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 ABCB6Q9NP58 842 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 PRDM1O75626 825 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 CYP7A1P22680 504 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 PTGDRQ13258 359 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 ZNF658Q5TYW1 1059 aaPredicted RBP16.38■□□□□ 0.21
SEC16A-208ENST00000467838 ZNF662Q6ZS27 426 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 RMND1Q9NWS8 449 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
SEC16A-208ENST00000467838 DOT1LQ8TEK3 1739 aa16.38■□□□□ 0.21
SEC16A-208ENST00000467838 MAGEB6P1A0A0J9YX57 407 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 RNF225M0QZC1 329 aaPredicted RBP16.37■□□□□ 0.21
SEC16A-208ENST00000467838 CCT6AP40227 531 aaKnown RBP16.37■□□□□ 0.21
SEC16A-208ENST00000467838 VSNL1P62760 191 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 ZNF174Q15697 407 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 IFIT1BQ5T764 474 aaKnown RBP16.37■□□□□ 0.21
SEC16A-208ENST00000467838 MARCH10Q8NA82 808 aaPredicted RBP16.37■□□□□ 0.21
SEC16A-208ENST00000467838 ANKRD20A12PQ8NF67 263 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 REXO2Q9Y3B8 237 aaKnown RBP16.37■□□□□ 0.21
SEC16A-208ENST00000467838 AFF2P51816 1311 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 A0A1W2PQC6 194 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 KCNJ18B7U540 433 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 PSMD14O00487 310 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 ZBTB22O15209 634 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 KCNJ12Q14500 433 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 NOM1Q5C9Z4 860 aaKnown RBP16.37■□□□□ 0.21
SEC16A-208ENST00000467838 SUSD4Q5VX71 490 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 RRAGBQ5VZM2 374 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 ARL6IP4Q66PJ3 421 aaKnown RBP16.37■□□□□ 0.21
SEC16A-208ENST00000467838 TRAPPC11Q7Z392 1133 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 DNAJC7Q99615 494 aa16.37■□□□□ 0.21
SEC16A-208ENST00000467838 CWC15Q9P013 229 aaKnown RBP16.37■□□□□ 0.21
SEC16A-208ENST00000467838 COL4A1P02462 1669 aa16.36■□□□□ 0.21
SEC16A-208ENST00000467838 ABL1P00519 1130 aa16.36■□□□□ 0.21
SEC16A-208ENST00000467838 ACTN2P35609 894 aa16.36■□□□□ 0.21
SEC16A-208ENST00000467838 SEMA3FQ13275 785 aa16.36■□□□□ 0.21
SEC16A-208ENST00000467838 IL17AQ16552 155 aa16.36■□□□□ 0.21
SEC16A-208ENST00000467838 CCDC152Q4G0S7 254 aa16.36■□□□□ 0.21
SEC16A-208ENST00000467838 NELFBQ8WX92 580 aa16.36■□□□□ 0.21
SEC16A-208ENST00000467838 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
SEC16A-208ENST00000467838 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
SEC16A-208ENST00000467838 KIAA1551Q9HCM1 1747 aa16.36■□□□□ 0.21
SEC16A-208ENST00000467838 A0A0G2JS52 829 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 EIF5P55010 431 aaKnown RBP16.35■□□□□ 0.21
SEC16A-208ENST00000467838 CASP8Q14790 479 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 TMED8Q6PL24 325 aaPredicted RBP16.35■□□□□ 0.21
SEC16A-208ENST00000467838 IQCA1Q86XH1 822 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 FAM71BQ8TC56 605 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
SEC16A-208ENST00000467838 VIPAS39Q9H9C1 493 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 TAB2Q9NYJ8 693 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 FEZ2Q9UHY8 353 aaPredicted RBP16.35■□□□□ 0.21
SEC16A-208ENST00000467838 MAST2Q6P0Q8 1798 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 H7C1D1 291 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 ORC4O43929 436 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 NDUFA10O95299 355 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 RPN1P04843 607 aaKnown RBP16.35■□□□□ 0.21
SEC16A-208ENST00000467838 CDC25AP30304 524 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 KRT9P35527 623 aa16.35■□□□□ 0.21
SEC16A-208ENST00000467838 LONP1P36776 959 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms