RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 TPCN1Q9ULQ1 816 aa17.2■□□□□ 0.34
DDX56-208ENST00000467318 NAP1L2Q9ULW6 460 aaPredicted RBP17.2■□□□□ 0.34
DDX56-208ENST00000467318 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
DDX56-208ENST00000467318 PARP1P09874 1014 aaKnown RBP17.19■□□□□ 0.34
DDX56-208ENST00000467318 BMP3P12645 472 aa17.19■□□□□ 0.34
DDX56-208ENST00000467318 VCAM1P19320 739 aa17.19■□□□□ 0.34
DDX56-208ENST00000467318 GRM1Q13255 1194 aa17.19■□□□□ 0.34
DDX56-208ENST00000467318 ASPRV1Q53RT3 343 aa17.19■□□□□ 0.34
DDX56-208ENST00000467318 CYP4F22Q6NT55 531 aa17.19■□□□□ 0.34
DDX56-208ENST00000467318 FANCBQ8NB91 859 aa17.19■□□□□ 0.34
DDX56-208ENST00000467318 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
DDX56-208ENST00000467318 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
DDX56-208ENST00000467318 MTMR7Q9Y216 660 aa17.19■□□□□ 0.34
DDX56-208ENST00000467318 PTPRFP10586 1907 aa17.18■□□□□ 0.34
DDX56-208ENST00000467318 TESPA1A2RU30 521 aaPredicted RBP17.18■□□□□ 0.34
DDX56-208ENST00000467318 GOLGA8BA8MQT2 603 aa17.18■□□□□ 0.34
DDX56-208ENST00000467318 METAP2P50579 478 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDX56-208ENST00000467318 ZNF543Q08ER8 600 aa17.18■□□□□ 0.34
DDX56-208ENST00000467318 KIAA1755Q5JYT7 1200 aa17.18■□□□□ 0.34
DDX56-208ENST00000467318 CHMP4CQ96CF2 233 aa17.18■□□□□ 0.34
DDX56-208ENST00000467318 CAPNS2Q96L46 248 aa17.18■□□□□ 0.34
DDX56-208ENST00000467318 LARP6Q9BRS8 491 aaKnown RBP17.18■□□□□ 0.34
DDX56-208ENST00000467318 MYL10Q9BUA6 226 aa17.18■□□□□ 0.34
DDX56-208ENST00000467318 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
DDX56-208ENST00000467318 CCL15-CCL14A0A0B4J2E2 113 aa17.17■□□□□ 0.34
DDX56-208ENST00000467318 HOXA7P31268 230 aaPredicted RBP17.17■□□□□ 0.34
DDX56-208ENST00000467318 GNAQP50148 359 aa17.17■□□□□ 0.34
DDX56-208ENST00000467318 PABPC4Q13310 644 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■□□□ 12.6
DDX56-208ENST00000467318 GRM4Q14833 912 aa17.17■□□□□ 0.34
DDX56-208ENST00000467318 CCL15Q16663 113 aa17.17■□□□□ 0.34
DDX56-208ENST00000467318 GADL1Q6ZQY3 521 aa17.17■□□□□ 0.34
DDX56-208ENST00000467318 REM2Q8IYK8 340 aaPredicted RBP17.17■□□□□ 0.34
DDX56-208ENST00000467318 ZIC5Q96T25 663 aa17.17■□□□□ 0.34
DDX56-208ENST00000467318 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
DDX56-208ENST00000467318 CIZ1Q9ULV3 898 aaPredicted RBP17.17■□□□□ 0.34
DDX56-208ENST00000467318 AGTPBP1Q9UPW5 1226 aa17.17■□□□□ 0.34
DDX56-208ENST00000467318 NID2Q14112 1375 aa17.17■□□□□ 0.34
DDX56-208ENST00000467318 PALM3A6NDB9 673 aaPredicted RBP17.16■□□□□ 0.34
DDX56-208ENST00000467318 GOLGA8AA7E2F4 631 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 PLA2G6O60733 806 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 SREBF2Q12772 1141 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 MOGSQ13724 837 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 CCDC96Q2M329 555 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
DDX56-208ENST00000467318 RASGRP2Q7LDG7 609 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 RPAP3Q9H6T3 665 aaPredicted RBP17.16■□□□□ 0.34
DDX56-208ENST00000467318 MAD2L2Q9UI95 211 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 HPS5Q9UPZ3 1129 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 SLC45A1Q9Y2W3 748 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 USP17L15C9J2P7 530 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 USP17L13C9JLJ4 530 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 USP17L11C9JVI0 530 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 USP17L18D6R9N7 530 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 USP17L22D6RA61 530 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 USP17L17D6RBQ6 530 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 USP17L19D6RCP7 530 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 USP17L20D6RJB6 530 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 DHX16O60231 1041 aaKnown RBP17.16■□□□□ 0.34
DDX56-208ENST00000467318 PFKFB2O60825 505 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 CD2BP2O95400 341 aaKnown RBP17.16■□□□□ 0.34
DDX56-208ENST00000467318 RXRAP19793 462 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 USP17L24Q0WX57 530 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 ME3Q16798 604 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 RTN1Q16799 776 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 FAM83BQ5T0W9 1011 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 KCTD1Q719H9 257 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 CHURC1Q8WUH1 139 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 BRI3BPQ8WY22 251 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 FEM1BQ9UK73 627 aa17.16■□□□□ 0.34
DDX56-208ENST00000467318 SMARCA1P28370 1054 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 MAP2K2P36507 400 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 STAT2P52630 851 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 OTUD7BQ6GQQ9 843 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 CATSPERGQ6ZRH7 1159 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 ANKRD23Q86SG2 305 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 FAM160B2Q86V87 743 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 NUP88Q99567 741 aaPredicted RBP17.15■□□□□ 0.34
DDX56-208ENST00000467318 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 ZCCHC17Q9NP64 241 aaKnown RBP17.15■□□□□ 0.34
DDX56-208ENST00000467318 ISY1Q9ULR0 285 aaKnown RBP17.15■□□□□ 0.34
DDX56-208ENST00000467318 WDR33Q9C0J8 1336 aaKnown RBP17.15■□□□□ 0.34
DDX56-208ENST00000467318 CEP350Q5VT06 3117 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 PCNTO95613 3336 aa17.15■□□□□ 0.34
DDX56-208ENST00000467318 TMEM232C9JQI7 657 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 KLRF2D3W0D1 207 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 PTMSP20962 102 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 TM4SF4P48230 202 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 STK3Q13188 491 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 TREML2Q5T2D2 321 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 GPAT2Q6NUI2 795 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 BTNL9Q6UXG8 535 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 RAB11FIP4Q86YS3 637 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 CCDC144CPQ8IYA2 1237 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 STAG2Q8N3U4 1231 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 HOXC10Q9NYD6 342 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 LOC285556D6RIA3 1793 aa17.14■□□□□ 0.33
DDX56-208ENST00000467318 FRMPD2Q68DX3 1309 aaPredicted RBP17.14■□□□□ 0.33
DDX56-208ENST00000467318 BTBD19C9JJ37 291 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 GOLGA8HP0CJ92 632 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms