RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 ATG4CQ96DT6 458 aa18.93■□□□□ 0.62
TSSC4-208ENST00000467308 VCPKMTQ9H867 229 aa18.93■□□□□ 0.62
TSSC4-208ENST00000467308 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
TSSC4-208ENST00000467308 PDLIM7Q9NR12 457 aa18.93■□□□□ 0.62
TSSC4-208ENST00000467308 PRUNE2Q8WUY3 3088 aa18.93■□□□□ 0.62
TSSC4-208ENST00000467308 GOLIM4O00461 696 aa18.92■□□□□ 0.62
TSSC4-208ENST00000467308 WDR46O15213 610 aaKnown RBP18.92■□□□□ 0.62
TSSC4-208ENST00000467308 SMAD3P84022 425 aaKnown RBP18.92■□□□□ 0.62
TSSC4-208ENST00000467308 ICA1Q05084 483 aa18.92■□□□□ 0.62
TSSC4-208ENST00000467308 PRAMEF19Q5SWL8 479 aa18.92■□□□□ 0.62
TSSC4-208ENST00000467308 C9orf50Q5SZB4 431 aa18.92■□□□□ 0.62
TSSC4-208ENST00000467308 CLASRPQ8N2M8 674 aaKnown RBP18.92■□□□□ 0.62
TSSC4-208ENST00000467308 CCDC17Q96LX7 622 aa18.92■□□□□ 0.62
TSSC4-208ENST00000467308 CDX2Q99626 313 aaPredicted RBP18.92■□□□□ 0.62
TSSC4-208ENST00000467308 SEMA6BQ9H3T3 888 aa18.92■□□□□ 0.62
TSSC4-208ENST00000467308 ATP8A2Q9NTI2 1148 aa18.92■□□□□ 0.62
TSSC4-208ENST00000467308 ADAMTS5Q9UNA0 930 aa18.92■□□□□ 0.62
TSSC4-208ENST00000467308 COL11A1P12107 1806 aaPredicted RBP18.92■□□□□ 0.62
TSSC4-208ENST00000467308 BAZ2AQ9UIF9 1905 aaKnown RBP18.92■□□□□ 0.62
TSSC4-208ENST00000467308 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
TSSC4-208ENST00000467308 CYP2D6P10635 497 aa18.91■□□□□ 0.62
TSSC4-208ENST00000467308 AKR1B1P15121 316 aa18.91■□□□□ 0.62
TSSC4-208ENST00000467308 FAM47AQ5JRC9 791 aa18.91■□□□□ 0.62
TSSC4-208ENST00000467308 SPICE1Q8N0Z3 855 aa18.91■□□□□ 0.62
TSSC4-208ENST00000467308 RWDD1Q9H446 243 aaPredicted RBP18.91■□□□□ 0.62
TSSC4-208ENST00000467308 PHF24Q9UPV7 400 aa18.91■□□□□ 0.62
TSSC4-208ENST00000467308 ROBO3Q96MS0 1386 aa18.91■□□□□ 0.62
TSSC4-208ENST00000467308 PLXNA1Q9UIW2 1896 aa18.9■□□□□ 0.62
TSSC4-208ENST00000467308 TRIM43BA6NCK2 446 aa18.9■□□□□ 0.62
TSSC4-208ENST00000467308 RARBP10826 455 aa18.9■□□□□ 0.62
TSSC4-208ENST00000467308 TMEM132BQ14DG7 1078 aa18.9■□□□□ 0.62
TSSC4-208ENST00000467308 B4GALNT3Q6L9W6 998 aa18.9■□□□□ 0.62
TSSC4-208ENST00000467308 TRIM43Q96BQ3 446 aaPredicted RBP18.9■□□□□ 0.62
TSSC4-208ENST00000467308 KIF1BPQ96EK5 621 aa18.9■□□□□ 0.62
TSSC4-208ENST00000467308 DYNLL2Q96FJ2 89 aa18.9■□□□□ 0.62
TSSC4-208ENST00000467308 DNAJC2Q99543 621 aaKnown RBP18.9■□□□□ 0.62
TSSC4-208ENST00000467308 DIS3Q9Y2L1 958 aaKnown RBP18.9■□□□□ 0.62
TSSC4-208ENST00000467308 TACC3Q9Y6A5 838 aa18.9■□□□□ 0.62
TSSC4-208ENST00000467308 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
TSSC4-208ENST00000467308 TLE2Q04725 743 aa18.89■□□□□ 0.61
TSSC4-208ENST00000467308 CENPQQ7L2Z9 268 aaPredicted RBP18.89■□□□□ 0.61
TSSC4-208ENST00000467308 SH3RF1Q7Z6J0 888 aa18.89■□□□□ 0.61
TSSC4-208ENST00000467308 RIOX2Q8IUF8 465 aa18.89■□□□□ 0.61
TSSC4-208ENST00000467308 CLEC10AQ8IUN9 316 aa18.89■□□□□ 0.61
TSSC4-208ENST00000467308 SIRT2Q8IXJ6 389 aa18.89■□□□□ 0.61
TSSC4-208ENST00000467308 FERMT2Q96AC1 680 aa18.89■□□□□ 0.61
TSSC4-208ENST00000467308 MMP19Q99542 508 aa18.89■□□□□ 0.61
TSSC4-208ENST00000467308 ARMT1Q9H993 441 aa18.89■□□□□ 0.61
TSSC4-208ENST00000467308 XPNPEP3Q9NQH7 507 aa18.89■□□□□ 0.61
TSSC4-208ENST00000467308 ADD2P35612 726 aa18.88■□□□□ 0.61
TSSC4-208ENST00000467308 CDK8P49336 464 aa18.88■□□□□ 0.61
TSSC4-208ENST00000467308 C12orf60Q5U649 245 aa18.88■□□□□ 0.61
TSSC4-208ENST00000467308 RNF180Q86T96 592 aa18.88■□□□□ 0.61
TSSC4-208ENST00000467308 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
TSSC4-208ENST00000467308 MAFAQ8NHW3 353 aaPredicted RBP18.88■□□□□ 0.61
TSSC4-208ENST00000467308 TINF2Q9BSI4 451 aa18.88■□□□□ 0.61
TSSC4-208ENST00000467308 KANSL2Q9H9L4 492 aa18.88■□□□□ 0.61
TSSC4-208ENST00000467308 TMEM265A0A087WTH1 108 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 PRKAB2O43741 272 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 HMMRO75330 724 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 MBD4O95243 580 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 CLTBP09497 229 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 COPB2P35606 906 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 KCTD2Q14681 263 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 ZNF792Q3KQV3 632 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 C16orf86Q6ZW13 317 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.87■□□□□ 0.61
TSSC4-208ENST00000467308 TTYH1Q9H313 450 aaPredicted RBP18.87■□□□□ 0.61
TSSC4-208ENST00000467308 SPTBN5Q9NRC6 3674 aaKnown RBP18.87■□□□□ 0.61
TSSC4-208ENST00000467308 PAG1Q9NWQ8 432 aa18.87■□□□□ 0.61
TSSC4-208ENST00000467308 MYH7P12883 1935 aa18.86■□□□□ 0.61
TSSC4-208ENST00000467308 VWA5AO00534 786 aa18.86■□□□□ 0.61
TSSC4-208ENST00000467308 KIAA0355O15063 1070 aa18.86■□□□□ 0.61
TSSC4-208ENST00000467308 IGHDP01880 384 aa18.86■□□□□ 0.61
TSSC4-208ENST00000467308 PGK2P07205 417 aa18.86■□□□□ 0.61
TSSC4-208ENST00000467308 EEF2P13639 858 aaKnown RBP18.86■□□□□ 0.61
TSSC4-208ENST00000467308 STAT3P40763 770 aa18.86■□□□□ 0.61
TSSC4-208ENST00000467308 SAMD1Q6SPF0 538 aaPredicted RBP18.86■□□□□ 0.61
TSSC4-208ENST00000467308 DDRGK1Q96HY6 314 aa18.86■□□□□ 0.61
TSSC4-208ENST00000467308 GOPCQ9HD26 462 aa18.86■□□□□ 0.61
TSSC4-208ENST00000467308 PPP1R9AQ9ULJ8 1098 aa18.86■□□□□ 0.61
TSSC4-208ENST00000467308 USP17L12C9JPN9 530 aa18.85■□□□□ 0.61
TSSC4-208ENST00000467308 USP17L21D6R901 530 aa18.85■□□□□ 0.61
TSSC4-208ENST00000467308 PGK1P00558 417 aa18.85■□□□□ 0.61
TSSC4-208ENST00000467308 ZNF865P0CJ78 1059 aaPredicted RBP18.85■□□□□ 0.61
TSSC4-208ENST00000467308 AKR1A1P14550 325 aa18.85■□□□□ 0.61
TSSC4-208ENST00000467308 ITGB8P26012 769 aa18.85■□□□□ 0.61
TSSC4-208ENST00000467308 MSL3Q8N5Y2 521 aaKnown RBP18.85■□□□□ 0.61
TSSC4-208ENST00000467308 FBXO28Q9NVF7 368 aa18.85■□□□□ 0.61
TSSC4-208ENST00000467308 ZNF214Q9UL59 606 aaPredicted RBP18.85■□□□□ 0.61
TSSC4-208ENST00000467308 A0A1W2PQ45 241 aaPredicted RBP18.84■□□□□ 0.61
TSSC4-208ENST00000467308 A0A1W2PQY0 241 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 APBB1O00213 710 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 RAB11FIP3O75154 756 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 ATP5JP18859 108 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 UBE3CQ15386 1083 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 SMC5Q8IY18 1101 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 REPS2Q8NFH8 660 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 MYLIPQ8WY64 445 aa18.84■□□□□ 0.61
TSSC4-208ENST00000467308 RNPC3Q96LT9 517 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms