RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 RGMBQ6NW40 437 aa15.48■□□□□ 0.07
PDCD11-202ENST00000466959 MICU3Q86XE3 530 aa15.48■□□□□ 0.07
PDCD11-202ENST00000466959 RASAL3Q86YV0 1011 aa15.48■□□□□ 0.07
PDCD11-202ENST00000466959 DCAF4Q8WV16 495 aa15.48■□□□□ 0.07
PDCD11-202ENST00000466959 GMCL1Q96IK5 515 aa15.48■□□□□ 0.07
PDCD11-202ENST00000466959 C12orf42Q96LP6 360 aa15.48■□□□□ 0.07
PDCD11-202ENST00000466959 HPS5Q9UPZ3 1129 aa15.48■□□□□ 0.07
PDCD11-202ENST00000466959 GOLGA8AA7E2F4 631 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 RAD21O60216 631 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 PFKFB2O60825 505 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 LARGE1O95461 756 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 ZBTB48P10074 688 aaPredicted RBP15.47■□□□□ 0.07
PDCD11-202ENST00000466959 PDHBP11177 359 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 ZNF157P51786 506 aaPredicted RBP15.47■□□□□ 0.07
PDCD11-202ENST00000466959 HMGCS2P54868 508 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 GRM4Q14833 912 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 ME3Q16798 604 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 KIAA1755Q5JYT7 1200 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 SPRYD7Q5W111 196 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 RAB11FIP4Q86YS3 637 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 HSCBQ8IWL3 235 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 NUP133Q8WUM0 1156 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 LPAR1Q92633 364 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 CCDC102AQ96A19 550 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 SH2B1Q9NRF2 756 aaPredicted RBP15.47■□□□□ 0.07
PDCD11-202ENST00000466959 MTMR7Q9Y216 660 aa15.47■□□□□ 0.07
PDCD11-202ENST00000466959 RBM19Q9Y4C8 960 aaKnown RBP15.47■□□□□ 0.07
PDCD11-202ENST00000466959 PARP14Q460N5 1801 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 A0A0G2JLL6 359 aaPredicted RBP15.46■□□□□ 0.07
PDCD11-202ENST00000466959 SLC10A3P09131 477 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 RXRAP19793 462 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 ANP32AP39687 249 aaKnown RBP15.46■□□□□ 0.07
PDCD11-202ENST00000466959 METAP2P50579 478 aaKnown RBP eCLIP15.46■□□□□ 0.07
PDCD11-202ENST00000466959 STK3Q13188 491 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 SNAPC2Q13487 334 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 PPP2R5BQ15173 497 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 RTN1Q16799 776 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 ASPRV1Q53RT3 343 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 RASGRP2Q7LDG7 609 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 PRRT2Q7Z6L0 340 aaPredicted RBP15.46■□□□□ 0.07
PDCD11-202ENST00000466959 FANCBQ8NB91 859 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 CTCFLQ8NI51 663 aaPredicted RBP15.46■□□□□ 0.07
PDCD11-202ENST00000466959 TMX3Q96JJ7 454 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
PDCD11-202ENST00000466959 EMILIN3Q9NT22 766 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 TMOD4Q9NZQ9 345 aa15.46■□□□□ 0.07
PDCD11-202ENST00000466959 CASP8AP2Q9UKL3 1982 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 K7ELQ4 463 aaPredicted RBP15.45■□□□□ 0.06
PDCD11-202ENST00000466959 WDR46O15213 610 aaKnown RBP15.45■□□□□ 0.06
PDCD11-202ENST00000466959 TNRC18O15417 2968 aaPredicted RBP15.45■□□□□ 0.06
PDCD11-202ENST00000466959 PARP1P09874 1014 aaKnown RBP15.45■□□□□ 0.06
PDCD11-202ENST00000466959 KIF5BP33176 963 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 SLC1A4P43007 532 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 GTF2A2P52657 109 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 ZNF543Q08ER8 600 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 CCDC96Q2M329 555 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 GPATCH4Q5T3I0 446 aaKnown RBP15.45■□□□□ 0.06
PDCD11-202ENST00000466959 CCDC144CPQ8IYA2 1237 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 SPICE1Q8N0Z3 855 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 PROCA1Q8NCQ7 364 aaPredicted RBP15.45■□□□□ 0.06
PDCD11-202ENST00000466959 GTF3C6Q969F1 213 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 RBM28Q9NW13 759 aaKnown RBP15.45■□□□□ 0.06
PDCD11-202ENST00000466959 MAD2L2Q9UI95 211 aa15.45■□□□□ 0.06
PDCD11-202ENST00000466959 CCDC196A0A1B0GTZ2 297 aa15.44■□□□□ 0.06
PDCD11-202ENST00000466959 PALM3A6NDB9 673 aaPredicted RBP15.44■□□□□ 0.06
PDCD11-202ENST00000466959 BMP3P12645 472 aa15.44■□□□□ 0.06
PDCD11-202ENST00000466959 VCAM1P19320 739 aa15.44■□□□□ 0.06
PDCD11-202ENST00000466959 GNAQP50148 359 aa15.44■□□□□ 0.06
PDCD11-202ENST00000466959 CCT2P78371 535 aaKnown RBP15.44■□□□□ 0.06
PDCD11-202ENST00000466959 FAM83BQ5T0W9 1011 aa15.44■□□□□ 0.06
PDCD11-202ENST00000466959 GADL1Q6ZQY3 521 aa15.44■□□□□ 0.06
PDCD11-202ENST00000466959 FASTKD5Q7L8L6 764 aaKnown RBP15.44■□□□□ 0.06
PDCD11-202ENST00000466959 CTU1Q7Z7A3 348 aaKnown RBP15.44■□□□□ 0.06
PDCD11-202ENST00000466959 NECAB1Q8N987 351 aa15.44■□□□□ 0.06
PDCD11-202ENST00000466959 CHMP4CQ96CF2 233 aa15.44■□□□□ 0.06
PDCD11-202ENST00000466959 NUP88Q99567 741 aaPredicted RBP15.44■□□□□ 0.06
PDCD11-202ENST00000466959 NCOA5Q9HCD5 579 aaKnown RBP15.44■□□□□ 0.06
PDCD11-202ENST00000466959 FAM217BQ9NTX9 383 aaPredicted RBP15.44■□□□□ 0.06
PDCD11-202ENST00000466959 FRMPD2Q68DX3 1309 aaPredicted RBP15.43■□□□□ 0.06
PDCD11-202ENST00000466959 MYH6P13533 1939 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 FAM155AB1AL88 458 aaPredicted RBP15.43■□□□□ 0.06
PDCD11-202ENST00000466959 TRPA1O75762 1119 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 CETPP11597 493 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 CDC27P30260 824 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 ST3GAL1Q11201 340 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 SCRN1Q12765 414 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 MKRN3Q13064 507 aaKnown RBP15.43■□□□□ 0.06
PDCD11-202ENST00000466959 MOGSQ13724 837 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 BECN1Q14457 450 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 TMTC3Q6ZXV5 915 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 KCTD1Q719H9 257 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 STAG2Q8N3U4 1231 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 MS4A4AQ96JQ5 239 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 LZTS2Q9BRK4 669 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 RPAP3Q9H6T3 665 aaPredicted RBP15.43■□□□□ 0.06
PDCD11-202ENST00000466959 ISY1Q9ULR0 285 aaKnown RBP15.43■□□□□ 0.06
PDCD11-202ENST00000466959 RLFQ13129 1914 aa15.43■□□□□ 0.06
PDCD11-202ENST00000466959 KLRF2D3W0D1 207 aa15.42■□□□□ 0.06
PDCD11-202ENST00000466959 DHX16O60231 1041 aaKnown RBP15.42■□□□□ 0.06
PDCD11-202ENST00000466959 PLA2G6O60733 806 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms