RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 IL23AQ9NPF7 189 aa18.07■□□□□ 0.48
HMGXB4-206ENST00000466438 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
HMGXB4-206ENST00000466438 LRP2BPQ9P2M1 347 aa18.07■□□□□ 0.48
HMGXB4-206ENST00000466438 SAP30BPQ9UHR5 308 aaKnown RBP18.07■□□□□ 0.48
HMGXB4-206ENST00000466438 ELP1O95163 1332 aa18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 PRR33A8MZF0 331 aa18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 POU3F3P20264 500 aaPredicted RBP18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 CDK7P50613 346 aa18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 NCAPG2Q86XI2 1143 aa18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 MB21D1Q8N884 522 aa18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 LENG1Q96BZ8 264 aaPredicted RBP18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 PPP1R12CQ9BZL4 782 aa18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 SALL2Q9Y467 1007 aaPredicted RBP18.06■□□□□ 0.48
HMGXB4-206ENST00000466438 SYNRGQ9UMZ2 1314 aa18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 GTPBP6O43824 516 aaPredicted RBP18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 CENPBP07199 599 aaPredicted RBP18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 ZNF865P0CJ78 1059 aaPredicted RBP18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 FCER1AP12319 257 aa18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 NAA16Q6N069 864 aaPredicted RBP18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 FAM9BQ8IZU0 186 aa18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 KLHDC9Q8NEP7 349 aa18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 GLT1D1Q96MS3 346 aa18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 TINF2Q9BSI4 451 aa18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 MTCH2Q9Y6C9 303 aa18.05■□□□□ 0.48
HMGXB4-206ENST00000466438 PRRC2BQ5JSZ5 2229 aaKnown RBP18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 FGBP02675 491 aa18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 TAL1P17542 331 aaPredicted RBP18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 ARID4AP29374 1257 aaPredicted RBP18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 PLS1Q14651 629 aa18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 KCNA10Q16322 511 aa18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 ABCB5Q2M3G0 1257 aa18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 CCSAPQ6IQ19 270 aaPredicted RBP18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 TANGO6Q9C0B7 1094 aa18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 PCDHA11Q9Y5I1 949 aa18.04■□□□□ 0.48
HMGXB4-206ENST00000466438 RABGGTBP53611 331 aa18.03■□□□□ 0.48
HMGXB4-206ENST00000466438 NHLH1Q02575 133 aa18.03■□□□□ 0.48
HMGXB4-206ENST00000466438 TFCP2Q12800 502 aa18.03■□□□□ 0.48
HMGXB4-206ENST00000466438 CERKLQ49MI3 558 aaPredicted RBP18.03■□□□□ 0.48
HMGXB4-206ENST00000466438 SERPINB13Q9UIV8 391 aa18.03■□□□□ 0.48
HMGXB4-206ENST00000466438 TLR3O15455 904 aaKnown RBP18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 CYP2C18P33260 490 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 MCAMP43121 646 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 GORABQ5T7V8 394 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 OTOP2Q7RTS6 562 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 ADGRA1Q86SQ6 560 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 FAM126BQ8IXS8 530 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 HLA-CQ95604 372 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 NEUROD6Q96NK8 337 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 EHD4Q9H223 541 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 CABP5Q9NP86 173 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 CNPY2Q9Y2B0 182 aa18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 DIS3Q9Y2L1 958 aaKnown RBP18.02■□□□□ 0.48
HMGXB4-206ENST00000466438 ZNFX1Q9P2E3 1918 aaKnown RBP18.02■□□□□ 0.47
HMGXB4-206ENST00000466438 A0A0U1RQG5 324 aaPredicted RBP18.01■□□□□ 0.47
HMGXB4-206ENST00000466438 ARVCFO00192 962 aa18.01■□□□□ 0.47
HMGXB4-206ENST00000466438 MYOGP15173 224 aa18.01■□□□□ 0.47
HMGXB4-206ENST00000466438 CST5P28325 142 aaPredicted RBP18.01■□□□□ 0.47
HMGXB4-206ENST00000466438 MMP19Q99542 508 aa18.01■□□□□ 0.47
HMGXB4-206ENST00000466438 SLC25A27O95847 323 aa18■□□□□ 0.47
HMGXB4-206ENST00000466438 PGK2P07205 417 aa18■□□□□ 0.47
HMGXB4-206ENST00000466438 DSG3P32926 999 aa18■□□□□ 0.47
HMGXB4-206ENST00000466438 ZNF792Q3KQV3 632 aa18■□□□□ 0.47
HMGXB4-206ENST00000466438 PCSK9Q8NBP7 692 aaKnown RBP18■□□□□ 0.47
HMGXB4-206ENST00000466438 CDCA7LQ96GN5 454 aa18■□□□□ 0.47
HMGXB4-206ENST00000466438 CD320Q9NPF0 282 aa18■□□□□ 0.47
HMGXB4-206ENST00000466438 FAM184BQ9ULE4 1060 aa18■□□□□ 0.47
HMGXB4-206ENST00000466438 SLC4A7Q9Y6M7 1214 aa18■□□□□ 0.47
HMGXB4-206ENST00000466438 MYH1P12882 1939 aa18■□□□□ 0.47
HMGXB4-206ENST00000466438 MYADML2A6NDP7 307 aa17.99■□□□□ 0.47
HMGXB4-206ENST00000466438 RFXAPO00287 272 aa17.99■□□□□ 0.47
HMGXB4-206ENST00000466438 UQCRFS1P1P0C7P4 283 aa17.99■□□□□ 0.47
HMGXB4-206ENST00000466438 GUCY1A2P33402 732 aa17.99■□□□□ 0.47
HMGXB4-206ENST00000466438 VTI1AQ96AJ9 217 aa17.99■□□□□ 0.47
HMGXB4-206ENST00000466438 KCNH6Q9H252 994 aa17.99■□□□□ 0.47
HMGXB4-206ENST00000466438 DUSP11O75319 330 aaKnown RBP17.98■□□□□ 0.47
HMGXB4-206ENST00000466438 CD4P01730 458 aa17.98■□□□□ 0.47
HMGXB4-206ENST00000466438 ASGR1P07306 291 aa17.98■□□□□ 0.47
HMGXB4-206ENST00000466438 ATXN8OSP0DMR3 200 aa17.98■□□□□ 0.47
HMGXB4-206ENST00000466438 KCTD2Q14681 263 aa17.98■□□□□ 0.47
HMGXB4-206ENST00000466438 ATG4CQ96DT6 458 aa17.98■□□□□ 0.47
HMGXB4-206ENST00000466438 HIPK3Q9H422 1215 aa17.98■□□□□ 0.47
HMGXB4-206ENST00000466438 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
HMGXB4-206ENST00000466438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.98■□□□□ 0.47
HMGXB4-206ENST00000466438 A0A1W2PRG0 241 aa17.97■□□□□ 0.47
HMGXB4-206ENST00000466438 FLOT1O75955 427 aa17.97■□□□□ 0.47
HMGXB4-206ENST00000466438 C6orf222P0C671 652 aaPredicted RBP17.97■□□□□ 0.47
HMGXB4-206ENST00000466438 ATP2A2P16615 1042 aaKnown RBP17.97■□□□□ 0.47
HMGXB4-206ENST00000466438 SEPT2Q15019 361 aa17.97■□□□□ 0.47
HMGXB4-206ENST00000466438 KRT40Q6A162 431 aa17.97■□□□□ 0.47
HMGXB4-206ENST00000466438 TTC6Q86TZ1 520 aa17.97■□□□□ 0.47
HMGXB4-206ENST00000466438 MSL3Q8N5Y2 521 aaKnown RBP17.97■□□□□ 0.47
HMGXB4-206ENST00000466438 IGSF3O75054 1194 aa17.96■□□□□ 0.47
HMGXB4-206ENST00000466438 CA3P07451 260 aa17.96■□□□□ 0.47
HMGXB4-206ENST00000466438 SHMT1P34896 483 aa17.96■□□□□ 0.47
HMGXB4-206ENST00000466438 DYNLL1P63167 89 aaKnown RBP17.96■□□□□ 0.47
HMGXB4-206ENST00000466438 TMEM132BQ14DG7 1078 aa17.96■□□□□ 0.47
HMGXB4-206ENST00000466438 TMEM67Q5HYA8 995 aa17.96■□□□□ 0.47
HMGXB4-206ENST00000466438 UIMC1Q96RL1 719 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms