RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 UBA5Q9GZZ9 404 aa15.52■□□□□ 0.07
UBE4B-206ENST00000466379 MTMR4Q9NYA4 1195 aa15.52■□□□□ 0.07
UBE4B-206ENST00000466379 ZKSCAN5Q9Y2L8 839 aa15.52■□□□□ 0.07
UBE4B-206ENST00000466379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.52■□□□□ 0.07
UBE4B-206ENST00000466379 GOLGA6L19H0YKK7 550 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 POLR2DO15514 142 aaKnown RBP15.51■□□□□ 0.07
UBE4B-206ENST00000466379 CAVIN2O95810 425 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 ZRSR1Q15695 479 aaKnown RBP15.51■□□□□ 0.07
UBE4B-206ENST00000466379 CEP57L1Q8IYX8 460 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 FAM13BQ9NYF5 915 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 C10orf71Q711Q0 1435 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 STXBP3O00186 592 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 MPHOSPH10O00566 681 aaKnown RBP15.51■□□□□ 0.07
UBE4B-206ENST00000466379 HLA-DOAP06340 250 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 NOVP48745 357 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 SHROOM1Q2M3G4 852 aaPredicted RBP15.51■□□□□ 0.07
UBE4B-206ENST00000466379 TRIM5Q9C035 493 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 CLIP2Q9UDT6 1046 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 PCDHA4Q9UN74 947 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 PLIN4Q96Q06 1357 aa15.51■□□□□ 0.07
UBE4B-206ENST00000466379 DDTLA6NHG4 134 aaPredicted RBP15.5■□□□□ 0.07
UBE4B-206ENST00000466379 BECN2A8MW95 431 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 PDHBP11177 359 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 CALML3P27482 149 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 MCM7P33993 719 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 DNAJC18Q9H819 358 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 TTC12Q9H892 705 aaPredicted RBP15.5■□□□□ 0.07
UBE4B-206ENST00000466379 SH3GLB2Q9NR46 395 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 FAM198AQ9UFP1 575 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 SERTAD1Q9UHV2 236 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 SIPA1L1O43166 1804 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 IGKV6D-41A0A0C4DH26 115 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 NLRP12P59046 1061 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 FKBP1AP62942 108 aaKnown RBP15.5■□□□□ 0.07
UBE4B-206ENST00000466379 ATP2B2Q01814 1243 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 PTGDRQ13258 359 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 GRAMD1CQ8IYS0 662 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 ZNF579Q8NAF0 562 aaKnown RBP15.5■□□□□ 0.07
UBE4B-206ENST00000466379 EPSTI1Q96J88 318 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 LZTS2Q9BRK4 669 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 SPZ1Q9BXG8 430 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 BARHL2Q9NY43 387 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 SWAP70Q9UH65 585 aa15.5■□□□□ 0.07
UBE4B-206ENST00000466379 DPEP1P16444 411 aa15.49■□□□□ 0.07
UBE4B-206ENST00000466379 ZNF75DP51815 510 aa15.49■□□□□ 0.07
UBE4B-206ENST00000466379 SH3BP5LQ7L8J4 393 aa15.49■□□□□ 0.07
UBE4B-206ENST00000466379 FOXP4Q8IVH2 680 aaPredicted RBP15.49■□□□□ 0.07
UBE4B-206ENST00000466379 ZSCAN29Q8IWY8 852 aaPredicted RBP15.49■□□□□ 0.07
UBE4B-206ENST00000466379 TTLL6Q8N841 843 aa15.49■□□□□ 0.07
UBE4B-206ENST00000466379 PIGSQ96S52 555 aa15.49■□□□□ 0.07
UBE4B-206ENST00000466379 TDRD3Q9H7E2 651 aaKnown RBP15.49■□□□□ 0.07
UBE4B-206ENST00000466379 A0A087X0B3 334 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 VWA3AA6NCI4 1184 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 PRR29P0C7W0 189 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 PLA2G4DQ86XP0 818 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 GPCPD1Q9NPB8 672 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 TUBE1Q9UJT0 475 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 PCDHA6Q9UN73 950 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 PCDHA8Q9Y5H6 950 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 M0R2N6 131 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 ATP2C1P98194 919 aaPredicted RBP15.48■□□□□ 0.07
UBE4B-206ENST00000466379 SUPT20HQ8NEM7 779 aa15.48■□□□□ 0.07
UBE4B-206ENST00000466379 SYMPKQ92797 1274 aaKnown RBP15.48■□□□□ 0.07
UBE4B-206ENST00000466379 NAT10Q9H0A0 1025 aaKnown RBP15.48■□□□□ 0.07
UBE4B-206ENST00000466379 ZNF277Q9NRM2 450 aaPredicted RBP15.48■□□□□ 0.07
UBE4B-206ENST00000466379 TTLL1O95922 423 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 KCNA3P22001 575 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 NAPAP54920 295 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 CFAP100Q494V2 611 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 CC2D2BQ6DHV5 1058 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 CCDC148Q8NFR7 591 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 DHX58Q96C10 678 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 RRP36Q96EU6 259 aaKnown RBP15.47■□□□□ 0.07
UBE4B-206ENST00000466379 MRIQ9BWK5 157 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 SERPINA10Q9UK55 444 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 PCDHA5Q9Y5H7 936 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 CCDC194A0A1B0GVG4 234 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 RAD17O75943 681 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 HDLBPQ00341 1268 aaKnown RBP15.47■□□□□ 0.07
UBE4B-206ENST00000466379 MDM2Q00987 491 aaPredicted RBP15.47■□□□□ 0.07
UBE4B-206ENST00000466379 IL17AQ16552 155 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 INF2Q27J81 1249 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 DRC7Q8IY82 874 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 IDI2Q9BXS1 227 aa15.47■□□□□ 0.07
UBE4B-206ENST00000466379 COL4A5P29400 1685 aa15.46■□□□□ 0.07
UBE4B-206ENST00000466379 ACTN4O43707 911 aaKnown RBP15.46■□□□□ 0.07
UBE4B-206ENST00000466379 BMP15O95972 392 aa15.46■□□□□ 0.07
UBE4B-206ENST00000466379 TRAPPC10P48553 1259 aa15.46■□□□□ 0.07
UBE4B-206ENST00000466379 FERMT2Q96AC1 680 aa15.46■□□□□ 0.07
UBE4B-206ENST00000466379 PRMT6Q96LA8 375 aaPredicted RBP15.46■□□□□ 0.07
UBE4B-206ENST00000466379 SEC63Q9UGP8 760 aaKnown RBP15.46■□□□□ 0.07
UBE4B-206ENST00000466379 NRBP1Q9UHY1 535 aa15.46■□□□□ 0.07
UBE4B-206ENST00000466379 POSTNQ15063 836 aa15.46■□□□□ 0.06
UBE4B-206ENST00000466379 TTBK2Q6IQ55 1244 aa15.46■□□□□ 0.06
UBE4B-206ENST00000466379 DAGLBQ8NCG7 672 aa15.46■□□□□ 0.06
UBE4B-206ENST00000466379 EHD4Q9H223 541 aa15.46■□□□□ 0.06
UBE4B-206ENST00000466379 MORC2Q9Y6X9 1032 aaPredicted RBP15.46■□□□□ 0.06
UBE4B-206ENST00000466379 GREB1LQ9C091 1923 aaPredicted RBP15.46■□□□□ 0.06
UBE4B-206ENST00000466379 MYO3BQ8WXR4 1341 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms