RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 CSRNP2Q9H175 543 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 CABP5Q9NP86 173 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 FANCLQ9NW38 375 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 ARGLU1Q9NWB6 273 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 SERTAD1Q9UHV2 236 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 RWDD2AQ9UIY3 292 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 KCNJ14Q9UNX9 436 aa7.78□□□□□ -1.16
CDHR3-204ENST00000466351 RTCBQ9Y3I0 505 aaKnown RBP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 FARP1Q9Y4F1 1045 aaPredicted RBP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDHR3-204ENST00000466351 BAZ2BQ9UIF8 2168 aaKnown RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 TSPY2A6NKD2 308 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 MINDY4BA8MYZ0 360 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 M0R2N6 131 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 LDHBP07195 334 aaKnown RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 H2AFXP16104 143 aaPredicted RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 TM4SF1P30408 202 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 NR1I3Q14994 352 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 ZNF658Q5TYW1 1059 aaPredicted RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 TBC1D9BQ66K14 1250 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 RCSD1Q6JBY9 416 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 ZNF662Q6ZS27 426 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 ARHGAP27Q6ZUM4 889 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 MSL3Q8N5Y2 521 aaKnown RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 TC2NQ8N9U0 490 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 SYMPKQ92797 1274 aaKnown RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 CELF1Q92879 486 aaKnown RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 BAG1Q99933 345 aaPredicted RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 KAT14Q9H8E8 782 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 INTS13Q9NVM9 706 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 PODXL2Q9NZ53 605 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 ADD3Q9UEY8 706 aaKnown RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 LIMA1Q9UHB6 759 aaKnown RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 DDX41Q9UJV9 622 aaKnown RBP7.77□□□□□ -1.17
CDHR3-204ENST00000466351 PCDHA4Q9UN74 947 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 LOXHD1Q8IVV2 1947 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 MYH4Q9Y623 1939 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 KIF13BQ9NQT8 1826 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 ARFGEF1Q9Y6D6 1849 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 SNED1Q8TER0 1413 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 ABCB11O95342 1321 aa7.77□□□□□ -1.17
CDHR3-204ENST00000466351 MYH7BA7E2Y1 1941 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 A0A1W2PQC6 194 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 USP27XA6NNY8 438 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 AKR1B15C9JRZ8 316 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-204ENST00000466351 POTEB2H3BUK9 544 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 H7C1D1 291 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 PPFIA3O75145 1194 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 PLEKHA8P1O95397 391 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 CCDC175P0C221 793 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 IL1R1P14778 569 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 ATP2B4P23634 1241 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 EEF1GP26641 437 aaKnown RBP7.76□□□□□ -1.17
CDHR3-204ENST00000466351 NLRP5P59047 1200 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 PTGDRQ13258 359 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 STIM1Q13586 685 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 ARID5BQ14865 1188 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 PPP1R18Q6NYC8 613 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 PDXDC2PQ6P474 469 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 TRIM65Q6PJ69 517 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 APTXQ7Z2E3 356 aaKnown RBP7.76□□□□□ -1.17
CDHR3-204ENST00000466351 KRT25Q7Z3Z0 450 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 BLIDQ8IZY5 108 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 SRBD1Q8N5C6 995 aaKnown RBP7.76□□□□□ -1.17
CDHR3-204ENST00000466351 RETREG2Q8NC44 543 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 PNMA1Q8ND90 353 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 OXER1Q8TDS5 423 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 ERCC4Q92889 916 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-204ENST00000466351 ACSBG1Q96GR2 724 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 PAGE5Q96GU1 130 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 ZKSCAN3Q9BRR0 538 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 BARHL2Q9NY43 387 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 FAM53CQ9NYF3 392 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 VPS54Q9P1Q0 977 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 ZNF215Q9UL58 517 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-204ENST00000466351 TTF2Q9UNY4 1162 aaKnown RBP7.76□□□□□ -1.17
CDHR3-204ENST00000466351 PPP2R2CQ9Y2T4 447 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 V9GY48 417 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-204ENST00000466351 GAKO14976 1311 aa7.76□□□□□ -1.17
CDHR3-204ENST00000466351 PSME4Q14997 1843 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 ANKRD31Q8N7Z5 1873 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 GPR75-ASB3A0A0A6YYF3 556 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 PALM3A6NDB9 673 aaPredicted RBP7.75□□□□□ -1.17
CDHR3-204ENST00000466351 C19orf67A6NJJ6 358 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 SNAP23O00161 211 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 MFAP3LO75121 409 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 RHOBTB3O94955 611 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 KIF20AO95235 890 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 CDK11BP21127 795 aaKnown RBP7.75□□□□□ -1.17
CDHR3-204ENST00000466351 GNA11P29992 359 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 PRDX5P30044 214 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 FMR1Q06787 632 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDHR3-204ENST00000466351 PAK1Q13153 545 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 CNNM4Q6P4Q7 775 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 C3orf67Q6ZVT6 689 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 C16orf86Q6ZW13 317 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 PPFIBP1Q86W92 1011 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 HOMER1Q86YM7 354 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 TMTC1Q8IUR5 882 aa7.75□□□□□ -1.17
CDHR3-204ENST00000466351 REXO1L1PQ8IX06 675 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms