RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 NDUFB10O96000 172 aa25.92■■□□□ 1.74
LIME1-203ENST00000465591 GRB14Q14449 540 aa25.92■■□□□ 1.74
LIME1-203ENST00000465591 NEDD1Q8NHV4 660 aa25.92■■□□□ 1.74
LIME1-203ENST00000465591 CRISPLD2Q9H0B8 497 aa25.92■■□□□ 1.74
LIME1-203ENST00000465591 ZNF287Q9HBT7 754 aa25.92■■□□□ 1.74
LIME1-203ENST00000465591 MTMR4Q9NYA4 1195 aa25.92■■□□□ 1.74
LIME1-203ENST00000465591 FLRT1Q9NZU1 646 aa25.92■■□□□ 1.74
LIME1-203ENST00000465591 ADAMTS5Q9UNA0 930 aa25.92■■□□□ 1.74
LIME1-203ENST00000465591 ZNFX1Q9P2E3 1918 aaKnown RBP25.92■■□□□ 1.74
LIME1-203ENST00000465591 RPTORQ8N122 1335 aa25.91■■□□□ 1.74
LIME1-203ENST00000465591 ZNF236Q9UL36 1845 aa25.91■■□□□ 1.74
LIME1-203ENST00000465591 F5H6K3 240 aa25.91■■□□□ 1.74
LIME1-203ENST00000465591 PRKAR2AP13861 404 aaKnown RBP25.91■■□□□ 1.74
LIME1-203ENST00000465591 ZKSCAN1P17029 563 aaPredicted RBP25.91■■□□□ 1.74
LIME1-203ENST00000465591 ERCC3P19447 782 aa25.91■■□□□ 1.74
LIME1-203ENST00000465591 PDE4AP27815 886 aa25.91■■□□□ 1.74
LIME1-203ENST00000465591 PDE4BQ07343 736 aa25.91■■□□□ 1.74
LIME1-203ENST00000465591 KLRC3Q07444 240 aa25.91■■□□□ 1.74
LIME1-203ENST00000465591 TMEM132BQ14DG7 1078 aa25.91■■□□□ 1.74
LIME1-203ENST00000465591 MB21D1Q8N884 522 aa25.91■■□□□ 1.74
LIME1-203ENST00000465591 SDSP20132 328 aa25.9■■□□□ 1.74
LIME1-203ENST00000465591 TFAP4Q01664 338 aa25.9■■□□□ 1.74
LIME1-203ENST00000465591 CACNB2Q08289 660 aaPredicted RBP25.9■■□□□ 1.74
LIME1-203ENST00000465591 PLS1Q14651 629 aa25.9■■□□□ 1.74
LIME1-203ENST00000465591 ALX1Q15699 326 aa25.9■■□□□ 1.74
LIME1-203ENST00000465591 TICAM2Q86XR7 235 aa25.9■■□□□ 1.74
LIME1-203ENST00000465591 LRRC47Q8N1G4 583 aaKnown RBP25.9■■□□□ 1.74
LIME1-203ENST00000465591 NPLOC4Q8TAT6 608 aa25.9■■□□□ 1.74
LIME1-203ENST00000465591 MKL1Q969V6 931 aa25.9■■□□□ 1.74
LIME1-203ENST00000465591 HMX1Q9NP08 348 aaPredicted RBP25.9■■□□□ 1.74
LIME1-203ENST00000465591 PPP1R9AQ9ULJ8 1098 aa25.9■■□□□ 1.74
LIME1-203ENST00000465591 FARP2O94887 1054 aaPredicted RBP25.89■■□□□ 1.74
LIME1-203ENST00000465591 FGAP02671 866 aa25.89■■□□□ 1.74
LIME1-203ENST00000465591 TFRCP02786 760 aaKnown RBP25.89■■□□□ 1.74
LIME1-203ENST00000465591 SLC3A2P08195 630 aaKnown RBP25.89■■□□□ 1.74
LIME1-203ENST00000465591 TSPY3P0CV98 308 aa25.89■■□□□ 1.74
LIME1-203ENST00000465591 TSPY8P0CW00 308 aa25.89■■□□□ 1.74
LIME1-203ENST00000465591 SHCBP1Q8NEM2 672 aa25.89■■□□□ 1.74
LIME1-203ENST00000465591 REPS2Q8NFH8 660 aa25.89■■□□□ 1.74
LIME1-203ENST00000465591 ANAPC4Q9UJX5 808 aa25.89■■□□□ 1.74
LIME1-203ENST00000465591 IVNS1ABPQ9Y6Y0 642 aa25.89■■□□□ 1.74
LIME1-203ENST00000465591 VWA5AO00534 786 aa25.88■■□□□ 1.73
LIME1-203ENST00000465591 HOXC6P09630 235 aa25.88■■□□□ 1.73
LIME1-203ENST00000465591 HSPD1P10809 573 aaKnown RBP25.88■■□□□ 1.73
LIME1-203ENST00000465591 TRMT44Q8IYL2 757 aaKnown RBP25.88■■□□□ 1.73
LIME1-203ENST00000465591 CCDC171Q6TFL3 1326 aa25.88■■□□□ 1.73
LIME1-203ENST00000465591 TTLL1O95922 423 aa25.87■■□□□ 1.73
LIME1-203ENST00000465591 ADORA2AP29274 412 aa25.87■■□□□ 1.73
LIME1-203ENST00000465591 CCND3P30281 292 aaPredicted RBP25.87■■□□□ 1.73
LIME1-203ENST00000465591 NCAPG2Q86XI2 1143 aa25.87■■□□□ 1.73
LIME1-203ENST00000465591 ALPK3Q96L96 1907 aa25.86■■□□□ 1.73
LIME1-203ENST00000465591 NMT2O60551 498 aa25.86■■□□□ 1.73
LIME1-203ENST00000465591 DIS3LQ8TF46 1054 aaKnown RBP25.86■■□□□ 1.73
LIME1-203ENST00000465591 IL17RBQ9NRM6 502 aa25.86■■□□□ 1.73
LIME1-203ENST00000465591 ZNF214Q9UL59 606 aaPredicted RBP25.86■■□□□ 1.73
LIME1-203ENST00000465591 FRMPD3Q5JV73 1810 aa25.86■■□□□ 1.73
LIME1-203ENST00000465591 COBLO75128 1261 aa25.85■■□□□ 1.73
LIME1-203ENST00000465591 IGHA2P01877 340 aa25.85■■□□□ 1.73
LIME1-203ENST00000465591 FGRP09769 529 aa25.85■■□□□ 1.73
LIME1-203ENST00000465591 SLF1Q9BQI6 1058 aa25.85■■□□□ 1.73
LIME1-203ENST00000465591 MROH8Q9H579 483 aa25.85■■□□□ 1.73
LIME1-203ENST00000465591 MNX1P50219 401 aaPredicted RBP25.84■■□□□ 1.73
LIME1-203ENST00000465591 GMCL1P1Q8NEA9 526 aa25.84■■□□□ 1.73
LIME1-203ENST00000465591 NBPF3Q9H094 633 aa25.84■■□□□ 1.73
LIME1-203ENST00000465591 ZMYM6O95789 1325 aa25.84■■□□□ 1.73
LIME1-203ENST00000465591 TSPY2A6NKD2 308 aa25.83■■□□□ 1.73
LIME1-203ENST00000465591 STRNO43815 780 aa25.83■■□□□ 1.73
LIME1-203ENST00000465591 ORC4O43929 436 aa25.83■■□□□ 1.73
LIME1-203ENST00000465591 CYP2C19P33261 490 aa25.83■■□□□ 1.73
LIME1-203ENST00000465591 HAND2P61296 217 aa25.83■■□□□ 1.73
LIME1-203ENST00000465591 CWC27Q6UX04 472 aaKnown RBP25.83■■□□□ 1.73
LIME1-203ENST00000465591 RIOX2Q8IUF8 465 aa25.83■■□□□ 1.73
LIME1-203ENST00000465591 PAWRQ96IZ0 340 aaKnown RBP25.83■■□□□ 1.73
LIME1-203ENST00000465591 SYNPO2Q9UMS6 1093 aa25.83■■□□□ 1.73
LIME1-203ENST00000465591 PLXNA1Q9UIW2 1896 aa25.83■■□□□ 1.72
LIME1-203ENST00000465591 RANBP6O60518 1105 aaKnown RBP25.82■■□□□ 1.72
LIME1-203ENST00000465591 STAT3P40763 770 aa25.82■■□□□ 1.72
LIME1-203ENST00000465591 SLFN13Q68D06 897 aa25.82■■□□□ 1.72
LIME1-203ENST00000465591 RASGRP2Q7LDG7 609 aa25.82■■□□□ 1.72
LIME1-203ENST00000465591 DPP9Q86TI2 863 aa25.82■■□□□ 1.72
LIME1-203ENST00000465591 CHMP4CQ96CF2 233 aa25.82■■□□□ 1.72
LIME1-203ENST00000465591 OGDHLQ9ULD0 1010 aa25.82■■□□□ 1.72
LIME1-203ENST00000465591 LAMA4Q16363 1823 aa25.81■■□□□ 1.72
LIME1-203ENST00000465591 SLC25A27O95847 323 aa25.81■■□□□ 1.72
LIME1-203ENST00000465591 GSPT1P15170 499 aaKnown RBP25.81■■□□□ 1.72
LIME1-203ENST00000465591 MFSD14CQ5VZR4 134 aa25.81■■□□□ 1.72
LIME1-203ENST00000465591 LHX8Q68G74 356 aa25.81■■□□□ 1.72
LIME1-203ENST00000465591 TRPV1Q8NER1 839 aa25.81■■□□□ 1.72
LIME1-203ENST00000465591 CAPN2P17655 700 aa25.8■■□□□ 1.72
LIME1-203ENST00000465591 TBC1D10CQ8IV04 446 aa25.8■■□□□ 1.72
LIME1-203ENST00000465591 ABRAQ8N0Z2 381 aa25.8■■□□□ 1.72
LIME1-203ENST00000465591 PRPF38AQ8NAV1 312 aaKnown RBP25.8■■□□□ 1.72
LIME1-203ENST00000465591 DPF3Q92784 378 aa25.8■■□□□ 1.72
LIME1-203ENST00000465591 KIFC2Q96AC6 838 aa25.8■■□□□ 1.72
LIME1-203ENST00000465591 IL25Q9H293 177 aa25.8■■□□□ 1.72
LIME1-203ENST00000465591 DIAPH3Q9NSV4 1193 aa25.8■■□□□ 1.72
LIME1-203ENST00000465591 STX8Q9UNK0 236 aa25.8■■□□□ 1.72
LIME1-203ENST00000465591 RIPK3Q9Y572 518 aa25.8■■□□□ 1.72
LIME1-203ENST00000465591 H0YGN5 161 aa25.79■■□□□ 1.72
LIME1-203ENST00000465591 FCER1AP12319 257 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms