RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 SMARCA1P28370 1054 aa25.15■■□□□ 1.62
ITGA4-204ENST00000465522 CCDC84Q86UT8 332 aaPredicted RBP25.15■■□□□ 1.62
ITGA4-204ENST00000465522 GOPCQ9HD26 462 aa25.15■■□□□ 1.62
ITGA4-204ENST00000465522 PICK1Q9NRD5 415 aa25.15■■□□□ 1.62
ITGA4-204ENST00000465522 ISY1Q9ULR0 285 aaKnown RBP25.15■■□□□ 1.62
ITGA4-204ENST00000465522 hCG_1642624A0A1W2PR95 340 aa25.14■■□□□ 1.61
ITGA4-204ENST00000465522 GUCY1B3Q02153 619 aa25.14■■□□□ 1.61
ITGA4-204ENST00000465522 KCTD1Q719H9 257 aa25.14■■□□□ 1.61
ITGA4-204ENST00000465522 FBXO18Q8NFZ0 1043 aa25.14■■□□□ 1.61
ITGA4-204ENST00000465522 PIBF1Q8WXW3 757 aa25.14■■□□□ 1.61
ITGA4-204ENST00000465522 SPZ1Q9BXG8 430 aa25.14■■□□□ 1.61
ITGA4-204ENST00000465522 UBA5Q9GZZ9 404 aa25.14■■□□□ 1.61
ITGA4-204ENST00000465522 RBM27Q9P2N5 1060 aaKnown RBP25.14■■□□□ 1.61
ITGA4-204ENST00000465522 NDUFB10O96000 172 aa25.13■■□□□ 1.61
ITGA4-204ENST00000465522 F13A1P00488 732 aa25.13■■□□□ 1.61
ITGA4-204ENST00000465522 TRIM29Q14134 588 aa25.13■■□□□ 1.61
ITGA4-204ENST00000465522 PKN1Q16512 942 aa25.13■■□□□ 1.61
ITGA4-204ENST00000465522 GMCL1Q96IK5 515 aa25.13■■□□□ 1.61
ITGA4-204ENST00000465522 DOCK1Q14185 1865 aa25.13■■□□□ 1.61
ITGA4-204ENST00000465522 CYTH3O43739 400 aa25.12■■□□□ 1.61
ITGA4-204ENST00000465522 OTUD7BQ6GQQ9 843 aa25.12■■□□□ 1.61
ITGA4-204ENST00000465522 RGS22Q8NE09 1264 aa25.12■■□□□ 1.61
ITGA4-204ENST00000465522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.12■■□□□ 1.61
ITGA4-204ENST00000465522 ZNF526Q8TF50 670 aaPredicted RBP25.12■■□□□ 1.61
ITGA4-204ENST00000465522 CPVLQ9H3G5 476 aa25.12■■□□□ 1.61
ITGA4-204ENST00000465522 GJB4Q9NTQ9 266 aa25.12■■□□□ 1.61
ITGA4-204ENST00000465522 MAP3K9P80192 1104 aa25.12■■□□□ 1.61
ITGA4-204ENST00000465522 MAP1SQ66K74 1059 aaPredicted RBP25.12■■□□□ 1.61
ITGA4-204ENST00000465522 VAT1LQ9HCJ6 419 aa25.12■■□□□ 1.61
ITGA4-204ENST00000465522 XBP1P17861 261 aa25.11■■□□□ 1.61
ITGA4-204ENST00000465522 IREB2P48200 963 aaKnown RBP25.11■■□□□ 1.61
ITGA4-204ENST00000465522 ZYXQ15942 572 aaKnown RBP25.11■■□□□ 1.61
ITGA4-204ENST00000465522 SLC35G1Q2M3R5 365 aa25.11■■□□□ 1.61
ITGA4-204ENST00000465522 FERMT3Q86UX7 667 aa25.11■■□□□ 1.61
ITGA4-204ENST00000465522 SPICE1Q8N0Z3 855 aa25.11■■□□□ 1.61
ITGA4-204ENST00000465522 FEZ1Q99689 392 aa25.11■■□□□ 1.61
ITGA4-204ENST00000465522 VCPKMTQ9H867 229 aa25.11■■□□□ 1.61
ITGA4-204ENST00000465522 NMRK2Q9NPI5 230 aa25.11■■□□□ 1.61
ITGA4-204ENST00000465522 BMP3P12645 472 aa25.1■■□□□ 1.61
ITGA4-204ENST00000465522 PTPRAP18433 802 aa25.1■■□□□ 1.61
ITGA4-204ENST00000465522 NOL9Q5SY16 702 aaKnown RBP25.1■■□□□ 1.61
ITGA4-204ENST00000465522 MCTP1Q6DN14 999 aa25.1■■□□□ 1.61
ITGA4-204ENST00000465522 TTBK2Q6IQ55 1244 aa25.1■■□□□ 1.61
ITGA4-204ENST00000465522 RIOX1Q9H6W3 641 aa25.1■■□□□ 1.61
ITGA4-204ENST00000465522 AS3MTQ9HBK9 375 aa25.1■■□□□ 1.61
ITGA4-204ENST00000465522 ATP6V1DQ9Y5K8 247 aa25.1■■□□□ 1.61
ITGA4-204ENST00000465522 SCG2P13521 617 aa25.09■■□□□ 1.61
ITGA4-204ENST00000465522 TTLL12Q14166 644 aaPredicted RBP25.09■■□□□ 1.61
ITGA4-204ENST00000465522 PFKFB3Q16875 520 aaPredicted RBP25.09■■□□□ 1.61
ITGA4-204ENST00000465522 KRT40Q6A162 431 aa25.09■■□□□ 1.61
ITGA4-204ENST00000465522 LDHDQ86WU2 507 aa25.09■■□□□ 1.61
ITGA4-204ENST00000465522 RRP36Q96EU6 259 aaKnown RBP25.09■■□□□ 1.61
ITGA4-204ENST00000465522 GBP4Q96PP9 640 aa25.09■■□□□ 1.61
ITGA4-204ENST00000465522 NUP88Q99567 741 aaPredicted RBP25.09■■□□□ 1.61
ITGA4-204ENST00000465522 USP17L10C9JJH3 530 aa25.08■■□□□ 1.61
ITGA4-204ENST00000465522 SLC16A2P36021 539 aa25.08■■□□□ 1.61
ITGA4-204ENST00000465522 KIAA1755Q5JYT7 1200 aa25.08■■□□□ 1.61
ITGA4-204ENST00000465522 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.08■■□□□ 1.61
ITGA4-204ENST00000465522 WDR18Q9BV38 432 aa25.08■■□□□ 1.61
ITGA4-204ENST00000465522 KIAA1683Q9H0B3 1180 aa25.08■■□□□ 1.61
ITGA4-204ENST00000465522 ZSCAN16Q9H4T2 348 aaPredicted RBP25.08■■□□□ 1.61
ITGA4-204ENST00000465522 SEC63Q9UGP8 760 aaKnown RBP25.08■■□□□ 1.61
ITGA4-204ENST00000465522 CSADQ9Y600 493 aa25.08■■□□□ 1.61
ITGA4-204ENST00000465522 ZHX2Q9Y6X8 837 aa25.08■■□□□ 1.61
ITGA4-204ENST00000465522 SPP2Q13103 211 aa25.07■■□□□ 1.6
ITGA4-204ENST00000465522 FOXD4L6Q3SYB3 417 aaPredicted RBP25.07■■□□□ 1.6
ITGA4-204ENST00000465522 FOXD4L3Q6VB84 417 aaPredicted RBP25.07■■□□□ 1.6
ITGA4-204ENST00000465522 CLEC17AQ6ZS10 378 aa25.07■■□□□ 1.6
ITGA4-204ENST00000465522 HOMER1Q86YM7 354 aa25.07■■□□□ 1.6
ITGA4-204ENST00000465522 ADGRF4Q8IZF3 695 aa25.07■■□□□ 1.6
ITGA4-204ENST00000465522 TMEM232C9JQI7 657 aa25.06■■□□□ 1.6
ITGA4-204ENST00000465522 IKQ13123 557 aaPredicted RBP25.06■■□□□ 1.6
ITGA4-204ENST00000465522 VGLL4Q14135 290 aa25.06■■□□□ 1.6
ITGA4-204ENST00000465522 ZNF280CQ8ND82 737 aa25.06■■□□□ 1.6
ITGA4-204ENST00000465522 PIGSQ96S52 555 aa25.06■■□□□ 1.6
ITGA4-204ENST00000465522 VPS54Q9P1Q0 977 aa25.06■■□□□ 1.6
ITGA4-204ENST00000465522 BAG4O95429 457 aaKnown RBP25.06■■□□□ 1.6
ITGA4-204ENST00000465522 ARMC9Q7Z3E5 817 aa25.06■■□□□ 1.6
ITGA4-204ENST00000465522 JMJD4Q9H9V9 463 aa25.06■■□□□ 1.6
ITGA4-204ENST00000465522 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.06■■□□□ 1.6
ITGA4-204ENST00000465522 TRAF5O00463 557 aa25.05■■□□□ 1.6
ITGA4-204ENST00000465522 USP14P54578 494 aa25.05■■□□□ 1.6
ITGA4-204ENST00000465522 FAM83BQ5T0W9 1011 aa25.05■■□□□ 1.6
ITGA4-204ENST00000465522 ANKRD13AQ8IZ07 590 aa25.05■■□□□ 1.6
ITGA4-204ENST00000465522 KCNJ14Q9UNX9 436 aa25.05■■□□□ 1.6
ITGA4-204ENST00000465522 MMP1P03956 469 aa25.04■■□□□ 1.6
ITGA4-204ENST00000465522 BACE1P56817 501 aa25.04■■□□□ 1.6
ITGA4-204ENST00000465522 RESTQ13127 1097 aa25.04■■□□□ 1.6
ITGA4-204ENST00000465522 MTMR2Q13614 643 aa25.04■■□□□ 1.6
ITGA4-204ENST00000465522 SAFBQ15424 915 aaKnown RBP eCLIP25.04■■□□□ 1.6
ITGA4-204ENST00000465522 MAP3K11Q16584 847 aa25.04■■□□□ 1.6
ITGA4-204ENST00000465522 MOB2Q70IA6 237 aa25.04■■□□□ 1.6
ITGA4-204ENST00000465522 LPAR1Q92633 364 aa25.04■■□□□ 1.6
ITGA4-204ENST00000465522 SNCAIPQ9Y6H5 919 aa25.04■■□□□ 1.6
ITGA4-204ENST00000465522 TCHHQ07283 1943 aa25.04■■□□□ 1.6
ITGA4-204ENST00000465522 TRIM75PA6NK02 468 aa25.03■■□□□ 1.6
ITGA4-204ENST00000465522 STAT2P52630 851 aa25.03■■□□□ 1.6
ITGA4-204ENST00000465522 GNL2Q13823 731 aaKnown RBP25.03■■□□□ 1.6
ITGA4-204ENST00000465522 GPKOWQ92917 476 aaPredicted RBP eCLIP25.03■■□□□ 1.6
ITGA4-204ENST00000465522 ZNF408Q9H9D4 720 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms