RNA–Protein interactions for RNA: ENST00000465176.5

PCCB-205, Transcript of propionyl-CoA carboxylase subunit beta, human

TSL 5

Gene PCCB, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCB-205	ENST00000465176	SLC28A3	Q9HAS3	691 aa		12.01	□□□□□ -0.49
PCCB-205	ENST00000465176	CABP5	Q9NP86	173 aa		12.01	□□□□□ -0.49
PCCB-205	ENST00000465176	YBX2	Q9Y2T7	364 aa	Known RBP	12.01	□□□□□ -0.49
PCCB-205	ENST00000465176	MROH7	Q68CQ1	1323 aa		12.01	□□□□□ -0.49
PCCB-205	ENST00000465176	SYNRG	Q9UMZ2	1314 aa		12.01	□□□□□ -0.49
PCCB-205	ENST00000465176		A0A1W2PRG0	241 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	ERC2	O15083	957 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	SRGAP3	O43295	1099 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	ACR	P10323	421 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	DSG3	P32926	999 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	SHMT1	P34896	483 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	MTX1	Q13505	466 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	PLS1	Q14651	629 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	CCSAP	Q6IQ19	270 aa	Predicted RBP	12	□□□□□ -0.49
PCCB-205	ENST00000465176	MICALL1	Q8N3F8	863 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	KLHDC9	Q8NEP7	349 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	MEIS3	Q99687	375 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	TINF2	Q9BSI4	451 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	SNRK	Q9NRH2	765 aa		12	□□□□□ -0.49
PCCB-205	ENST00000465176	DIS3	Q9Y2L1	958 aa	Known RBP	12	□□□□□ -0.49
PCCB-205	ENST00000465176	COL11A1	P12107	1806 aa	Predicted RBP	12	□□□□□ -0.49
PCCB-205	ENST00000465176	CYP2E1	P05181	493 aa	Predicted RBP	11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	CDK7	P50613	346 aa		11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	SEPT2	Q15019	361 aa		11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	ZNF792	Q3KQV3	632 aa		11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	ALDH1L2	Q3SY69	923 aa		11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	ATG4C	Q96DT6	458 aa		11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	MMP19	Q99542	508 aa		11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	MTIF3	Q9H2K0	278 aa	Known RBP	11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	IL23A	Q9NPF7	189 aa		11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	C11orf16	Q9NQ32	467 aa		11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	ELP1	O95163	1332 aa		11.99	□□□□□ -0.49
PCCB-205	ENST00000465176	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	NAV1	Q8NEY1	1877 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	MYADML2	A6NDP7	307 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	APBB1	O00213	710 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	GPR37L1	O60883	481 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	SLC25A27	O95847	323 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	PGK2	P07205	417 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	CST5	P28325	142 aa	Predicted RBP	11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	USP5	P45974	858 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	KCNA10	Q16322	511 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	KIAA1755	Q5JYT7	1200 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	TTC6	Q86TZ1	520 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	ALYREF	Q86V81	257 aa	Known RBP	11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	CERS3	Q8IU89	383 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	GLT1D1	Q96MS3	346 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	PPP1R12C	Q9BZL4	782 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	PIH1D3	Q9NQM4	214 aa	Known RBP	11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	SMC4	Q9NTJ3	1288 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	CNPY2	Q9Y2B0	182 aa		11.98	□□□□□ -0.49
PCCB-205	ENST00000465176	ARVCF	O00192	962 aa		11.97	□□□□□ -0.49
PCCB-205	ENST00000465176	FLOT1	O75955	427 aa		11.97	□□□□□ -0.49
PCCB-205	ENST00000465176	CYP7A1	P22680	504 aa		11.97	□□□□□ -0.49
PCCB-205	ENST00000465176	TMEM132B	Q14DG7	1078 aa		11.97	□□□□□ -0.49
PCCB-205	ENST00000465176	SKIV2L	Q15477	1246 aa	Known RBP	11.97	□□□□□ -0.49
PCCB-205	ENST00000465176	TTC39A	Q5SRH9	613 aa		11.97	□□□□□ -0.49
PCCB-205	ENST00000465176	PPP2R2D	Q66LE6	453 aa		11.97	□□□□□ -0.49
PCCB-205	ENST00000465176	FAM126B	Q8IXS8	530 aa		11.97	□□□□□ -0.49
PCCB-205	ENST00000465176	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.97	□□□□□ -0.49	3e-9	■■■□□ 16.1
PCCB-205	ENST00000465176	CDCA7L	Q96GN5	454 aa		11.97	□□□□□ -0.49
PCCB-205	ENST00000465176		A0A0U1RQG5	324 aa	Predicted RBP	11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	FAM86C2P	A6NEL3	165 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	TLL1	O43897	1013 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	DUSP11	O75319	330 aa	Known RBP	11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	FGB	P02675	491 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	POU3F3	P20264	500 aa	Predicted RBP	11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	CYP2C18	P33260	490 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	ZAP70	P43403	619 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	PLCD1	P51178	756 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	RABGGTB	P53611	331 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	GABPA	Q06546	454 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	KCTD2	Q14681	263 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	RIOX2	Q8IUF8	465 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	MSL3	Q8N5Y2	521 aa	Known RBP	11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	MIGA1	Q8NAN2	632 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	FAM184B	Q9ULE4	1060 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	COG5	Q9UP83	839 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	PCDHA11	Q9Y5I1	949 aa		11.96	□□□□□ -0.49
PCCB-205	ENST00000465176	TLR3	O15455	904 aa	Known RBP	11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	CD4	P01730	458 aa		11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	ASGR1	P07306	291 aa		11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	IRX5	P78411	483 aa	Predicted RBP	11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	CCDC158	Q5M9N0	1113 aa		11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	PCSK9	Q8NBP7	692 aa	Known RBP	11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	SNX27	Q96L92	541 aa		11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	DBNDD2	Q9BQY9	259 aa		11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	API5	Q9BZZ5	524 aa	Known RBP	11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	ADAMTS5	Q9UNA0	930 aa		11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	MTCH2	Q9Y6C9	303 aa		11.95	□□□□□ -0.5
PCCB-205	ENST00000465176	MYH8	P13535	1937 aa		11.94	□□□□□ -0.5
PCCB-205	ENST00000465176		E9PSI1	815 aa		11.94	□□□□□ -0.5
PCCB-205	ENST00000465176	MPHOSPH10	O00566	681 aa	Known RBP	11.94	□□□□□ -0.5
PCCB-205	ENST00000465176	WDR46	O15213	610 aa	Known RBP	11.94	□□□□□ -0.5
PCCB-205	ENST00000465176	GNAI3	P08754	354 aa		11.94	□□□□□ -0.5
PCCB-205	ENST00000465176	C6orf222	P0C671	652 aa	Predicted RBP	11.94	□□□□□ -0.5
PCCB-205	ENST00000465176	MYOG	P15173	224 aa		11.94	□□□□□ -0.5
PCCB-205	ENST00000465176	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.94	□□□□□ -0.5	3e-6	■■■□□ 18
PCCB-205	ENST00000465176	TNNI3K	Q59H18	835 aa		11.94	□□□□□ -0.5

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