RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 LRRC3Q9BY71 257 aa5.45□□□□□ -1.54
SCN3A-206ENST00000465043 ASCC2Q9H1I8 757 aaPredicted RBP5.45□□□□□ -1.54
SCN3A-206ENST00000465043 EPB41L4BQ9H329 900 aa5.45□□□□□ -1.54
SCN3A-206ENST00000465043 SAMD9Q5K651 1589 aa5.45□□□□□ -1.54
SCN3A-206ENST00000465043 RBM47A0AV96 593 aaKnown RBP5.44□□□□□ -1.54
SCN3A-206ENST00000465043 UPK3BL1B0FP48 263 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 UPK3BL2E5RIL1 263 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 HK2P52789 917 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 RAD51AP2Q09MP3 1159 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 DUSP4Q13115 394 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 NR0B2Q15466 257 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 RALGPS1Q5JS13 557 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 SYDE1Q6ZW31 735 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-206ENST00000465043 PHACTR4Q8IZ21 702 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 CASKIN1Q8WXD9 1431 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 SLC26A8Q96RN1 970 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 NSUN3Q9H649 340 aaKnown RBP5.44□□□□□ -1.54
SCN3A-206ENST00000465043 DCP1AQ9NPI6 582 aaPredicted RBP5.44□□□□□ -1.54
SCN3A-206ENST00000465043 KCNQ5Q9NR82 932 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 KLHL3Q9UH77 587 aa5.44□□□□□ -1.54
SCN3A-206ENST00000465043 SUPT16HQ9Y5B9 1047 aaKnown RBP5.44□□□□□ -1.54
SCN3A-206ENST00000465043 UGGT2Q9NYU1 1516 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 TIAM1Q13009 1591 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 NUP160Q12769 1436 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 FMN1Q68DA7 1419 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 TMEM253P0C7T8 217 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 GBP1P32455 592 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 SNX17Q15036 470 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 CLEC16AQ2KHT3 1053 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 ERMP1Q7Z2K6 904 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.43□□□□□ -1.54
SCN3A-206ENST00000465043 SLC6A17Q9H1V8 727 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 ADAMTS10Q9H324 1103 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 CWC22Q9HCG8 908 aaKnown RBP5.43□□□□□ -1.54
SCN3A-206ENST00000465043 DISP1Q96F81 1524 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 CHD1O14646 1710 aa5.43□□□□□ -1.54
SCN3A-206ENST00000465043 MINDY4BA8MYZ0 360 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 RGS13O14921 159 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 GRIN3BO60391 1043 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 CCNFP41002 786 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 IRF2BP1Q8IU81 584 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 SIAH1Q8IUQ4 282 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 KBTBD4Q9NVX7 518 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 GMIPQ9P107 970 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 POLR3KQ9Y2Y1 108 aaPredicted RBP5.42□□□□□ -1.54
SCN3A-206ENST00000465043 PCDHA11Q9Y5I1 949 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 LRRC9Q6ZRR7 1453 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 FYCO1Q9BQS8 1478 aa5.42□□□□□ -1.54
SCN3A-206ENST00000465043 KIAA0556O60303 1618 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 LRRIQ1Q96JM4 1722 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 CHURC1-FNTBB4DL54 471 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 F6X3S4 739 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 ATE1O95260 518 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 ZGLP1P0C6A0 271 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 RAG1P15918 1043 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 EIF4A3P38919 411 aaKnown RBP5.41□□□□□ -1.54
SCN3A-206ENST00000465043 FAM160A1Q05DH4 1040 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 FBLN7Q53RD9 439 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 RNF111Q6ZNA4 994 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 HS2ST1Q7LGA3 356 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 ANKS4BQ8N8V4 417 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 BAHD1Q8TBE0 780 aaPredicted RBP5.41□□□□□ -1.54
SCN3A-206ENST00000465043 DIRC2Q96SL1 478 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 BCL2L13Q9BXK5 485 aa5.41□□□□□ -1.54
SCN3A-206ENST00000465043 GZF1Q9H116 711 aaPredicted RBP5.41□□□□□ -1.54
SCN3A-206ENST00000465043 MAP3K1Q13233 1512 aa5.4□□□□□ -1.54
SCN3A-206ENST00000465043 GREM1O60565 184 aa5.4□□□□□ -1.54
SCN3A-206ENST00000465043 MED14OSP0DP75 135 aa5.4□□□□□ -1.54
SCN3A-206ENST00000465043 ENDOUP21128 410 aaKnown RBP5.4□□□□□ -1.54
SCN3A-206ENST00000465043 GARTP22102 1010 aa5.4□□□□□ -1.54
SCN3A-206ENST00000465043 GLDCP23378 1020 aa5.4□□□□□ -1.54
SCN3A-206ENST00000465043 NMIQ13287 307 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-206ENST00000465043 LRRFIP1Q32MZ4 808 aaKnown RBP5.4□□□□□ -1.54
SCN3A-206ENST00000465043 SPOCD1Q6ZMY3 1216 aa5.4□□□□□ -1.54
SCN3A-206ENST00000465043 LRRC56Q8IYG6 542 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-206ENST00000465043 REXO1Q8N1G1 1221 aaKnown RBP5.4□□□□□ -1.54
SCN3A-206ENST00000465043 SYTL5Q8TDW5 730 aaPredicted RBP5.4□□□□□ -1.54
SCN3A-206ENST00000465043 KIF2CQ99661 725 aa5.4□□□□□ -1.54
SCN3A-206ENST00000465043 CFAP43Q8NDM7 1665 aa5.4□□□□□ -1.55
SCN3A-206ENST00000465043 PHLDB1Q86UU1 1377 aa5.4□□□□□ -1.55
SCN3A-206ENST00000465043 PRG4Q92954 1404 aaPredicted RBP5.4□□□□□ -1.55
SCN3A-206ENST00000465043 CDK13Q14004 1512 aaKnown RBP5.39□□□□□ -1.55
SCN3A-206ENST00000465043 TCAF2A6NFQ2 919 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 SLC22A31A6NKX4 558 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 WASH4PA8MWX3 477 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 LRRN2O75325 713 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 FAM50AQ14320 339 aaKnown RBP5.39□□□□□ -1.55
SCN3A-206ENST00000465043 CDCP2Q5VXM1 449 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 FBXL19Q6PCT2 694 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 ZNF655Q8N720 491 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-206ENST00000465043 DAGLBQ8NCG7 672 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 EHMT1Q9H9B1 1298 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 GGT7Q9UJ14 662 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 PCDHB14Q9Y5E9 798 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 MTUS2Q5JR59 1369 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 PLB1Q6P1J6 1458 aa5.39□□□□□ -1.55
SCN3A-206ENST00000465043 TLR3O15455 904 aaKnown RBP5.38□□□□□ -1.55
SCN3A-206ENST00000465043 PEX10O60683 326 aa5.38□□□□□ -1.55
SCN3A-206ENST00000465043 C1QTNF9P0C862 333 aa5.38□□□□□ -1.55
SCN3A-206ENST00000465043 CFPP27918 469 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms