RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 HDAC8Q9BY41 377 aa7.9□□□□□ -1.14
UBR4-209ENST00000465036 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.9□□□□□ -1.14
UBR4-209ENST00000465036 IRF2BPLQ9H1B7 796 aa7.9□□□□□ -1.14
UBR4-209ENST00000465036 CRTAC1Q9NQ79 661 aa7.9□□□□□ -1.14
UBR4-209ENST00000465036 GRIN3BO60391 1043 aa7.89□□□□□ -1.15
UBR4-209ENST00000465036 ATE1O95260 518 aa7.89□□□□□ -1.15
UBR4-209ENST00000465036 GBP1P32455 592 aa7.89□□□□□ -1.15
UBR4-209ENST00000465036 PDE6BP35913 854 aa7.89□□□□□ -1.15
UBR4-209ENST00000465036 SNAP47Q5SQN1 464 aa7.89□□□□□ -1.15
UBR4-209ENST00000465036 ZNF655Q8N720 491 aaPredicted RBP7.89□□□□□ -1.15
UBR4-209ENST00000465036 GOLM1Q8NBJ4 401 aa7.89□□□□□ -1.15
UBR4-209ENST00000465036 FAM161BQ96MY7 647 aa7.89□□□□□ -1.15
UBR4-209ENST00000465036 OR14I1A6ND48 311 aa7.88□□□□□ -1.15
UBR4-209ENST00000465036 SLC22A31A6NKX4 558 aa7.88□□□□□ -1.15
UBR4-209ENST00000465036 NRDCO43847 1150 aa7.88□□□□□ -1.15
UBR4-209ENST00000465036 CTSWP56202 376 aa7.88□□□□□ -1.15
UBR4-209ENST00000465036 ZNF385BQ569K4 471 aa7.88□□□□□ -1.15
UBR4-209ENST00000465036 TMEM132EQ6IEE7 984 aa7.88□□□□□ -1.15
UBR4-209ENST00000465036 LINC00116Q8NCU8 138 aa7.88□□□□□ -1.15
UBR4-209ENST00000465036 PARD6AQ9NPB6 346 aa7.88□□□□□ -1.15
UBR4-209ENST00000465036 CNOT6Q9ULM6 557 aaKnown RBP7.88□□□□□ -1.15
UBR4-209ENST00000465036 F6X3S4 739 aa7.87□□□□□ -1.15
UBR4-209ENST00000465036 UBOX5O94941 541 aa7.87□□□□□ -1.15
UBR4-209ENST00000465036 HOXA5P20719 270 aa7.87□□□□□ -1.15
UBR4-209ENST00000465036 CHMP4BP1P59074 171 aa7.87□□□□□ -1.15
UBR4-209ENST00000465036 RAD51AP2Q09MP3 1159 aa7.87□□□□□ -1.15
UBR4-209ENST00000465036 ERMP1Q7Z2K6 904 aa7.87□□□□□ -1.15
UBR4-209ENST00000465036 TMEM151BQ8IW70 566 aa7.87□□□□□ -1.15
UBR4-209ENST00000465036 MAP6Q96JE9 813 aa7.87□□□□□ -1.15
UBR4-209ENST00000465036 RFXAPO00287 272 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 GREM1O60565 184 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 ERCC3P19447 782 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 CCNFP41002 786 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 PCBP3P57721 371 aaKnown RBP7.86□□□□□ -1.15
UBR4-209ENST00000465036 CWF19L2Q2TBE0 894 aaKnown RBP7.86□□□□□ -1.15
UBR4-209ENST00000465036 NBPF9Q3BBW0 867 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 TCERG1LQ5VWI1 586 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 CDCP2Q5VXM1 449 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 TCTN2Q96GX1 697 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 C20orf173Q96LM9 149 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 MRS2Q9HD23 443 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 GMIPQ9P107 970 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 KCTD3Q9Y597 815 aa7.86□□□□□ -1.15
UBR4-209ENST00000465036 RPL10P27635 214 aaKnown RBP7.85□□□□□ -1.15
UBR4-209ENST00000465036 FAM160A1Q05DH4 1040 aa7.85□□□□□ -1.15
UBR4-209ENST00000465036 NBPF12Q5TAG4 269 aaPredicted RBP7.85□□□□□ -1.15
UBR4-209ENST00000465036 FBXO27Q8NI29 283 aa7.85□□□□□ -1.15
UBR4-209ENST00000465036 KCNC2Q96PR1 638 aa7.85□□□□□ -1.15
UBR4-209ENST00000465036 EHMT1Q9H9B1 1298 aa7.85□□□□□ -1.15
UBR4-209ENST00000465036 TCFL5Q9UL49 500 aa7.85□□□□□ -1.15
UBR4-209ENST00000465036 TMEM82A0PJX8 343 aa7.84□□□□□ -1.15
UBR4-209ENST00000465036 MINDY4BA8MYZ0 360 aa7.84□□□□□ -1.15
UBR4-209ENST00000465036 RAG1P15918 1043 aa7.84□□□□□ -1.15
UBR4-209ENST00000465036 PNLIPP16233 465 aa7.84□□□□□ -1.15
UBR4-209ENST00000465036 YBX1P67809 324 aaKnown RBP7.84□□□□□ -1.15
UBR4-209ENST00000465036 ARSHQ5FYA8 562 aa7.84□□□□□ -1.15
UBR4-209ENST00000465036 WAPLQ7Z5K2 1190 aa7.84□□□□□ -1.15
UBR4-209ENST00000465036 FOXP3Q9BZS1 431 aa7.84□□□□□ -1.15
UBR4-209ENST00000465036 VTI1BQ9UEU0 232 aa7.84□□□□□ -1.15
UBR4-209ENST00000465036 MBD1Q9UIS9 605 aaPredicted RBP7.84□□□□□ -1.15
UBR4-209ENST00000465036 EFEMP2O95967 443 aa7.83□□□□□ -1.16
UBR4-209ENST00000465036 ENDOUP21128 410 aaKnown RBP7.83□□□□□ -1.16
UBR4-209ENST00000465036 SLC14A2Q15849 920 aa7.83□□□□□ -1.16
UBR4-209ENST00000465036 FBXL19Q6PCT2 694 aa7.83□□□□□ -1.16
UBR4-209ENST00000465036 MARCH10Q8NA82 808 aaPredicted RBP7.83□□□□□ -1.16
UBR4-209ENST00000465036 SGPP1Q9BX95 441 aa7.83□□□□□ -1.16
UBR4-209ENST00000465036 KRTAP9-3Q9BYQ3 159 aa7.83□□□□□ -1.16
UBR4-209ENST00000465036 CNNM2Q9H8M5 875 aa7.83□□□□□ -1.16
UBR4-209ENST00000465036 KBTBD4Q9NVX7 518 aa7.83□□□□□ -1.16
UBR4-209ENST00000465036 TNFRSF10DQ9UBN6 386 aa7.83□□□□□ -1.16
UBR4-209ENST00000465036 ZMYM5Q9UJ78 669 aa7.83□□□□□ -1.16
UBR4-209ENST00000465036 SUPT16HQ9Y5B9 1047 aaKnown RBP7.83□□□□□ -1.16
UBR4-209ENST00000465036 ABLIM1O14639 778 aa7.82□□□□□ -1.16
UBR4-209ENST00000465036 SIGLEC6O43699 453 aa7.82□□□□□ -1.16
UBR4-209ENST00000465036 USP2O75604 605 aaPredicted RBP7.82□□□□□ -1.16
UBR4-209ENST00000465036 BUD31P41223 144 aaPredicted RBP7.82□□□□□ -1.16
UBR4-209ENST00000465036 BBS9Q3SYG4 887 aa7.82□□□□□ -1.16
UBR4-209ENST00000465036 ADGRF1Q5T601 910 aa7.82□□□□□ -1.16
UBR4-209ENST00000465036 OLFML2BQ68BL8 750 aa7.82□□□□□ -1.16
UBR4-209ENST00000465036 HHIPL1Q96JK4 782 aa7.82□□□□□ -1.16
UBR4-209ENST00000465036 SIGLEC10Q96LC7 697 aa7.82□□□□□ -1.16
UBR4-209ENST00000465036 BRMS1Q9HCU9 246 aa7.82□□□□□ -1.16
UBR4-209ENST00000465036 PCDHB14Q9Y5E9 798 aa7.82□□□□□ -1.16
UBR4-209ENST00000465036 SSU72P8A0A1W2PR75 194 aa7.81□□□□□ -1.16
UBR4-209ENST00000465036 EIF4A3P38919 411 aaKnown RBP7.81□□□□□ -1.16
UBR4-209ENST00000465036 ERVFRD-1P60508 538 aa7.81□□□□□ -1.16
UBR4-209ENST00000465036 SRSF3P84103 164 aaKnown RBP7.81□□□□□ -1.16
UBR4-209ENST00000465036 CEP128Q6ZU80 1094 aa7.81□□□□□ -1.16
UBR4-209ENST00000465036 TMC3Q7Z5M5 1100 aa7.81□□□□□ -1.16
UBR4-209ENST00000465036 REXO1Q8N1G1 1221 aaKnown RBP7.81□□□□□ -1.16
UBR4-209ENST00000465036 RELTQ969Z4 430 aa7.81□□□□□ -1.16
UBR4-209ENST00000465036 FCRL2Q96LA5 508 aaPredicted RBP7.81□□□□□ -1.16
UBR4-209ENST00000465036 KRTAP4-5Q9BYR2 181 aa7.81□□□□□ -1.16
UBR4-209ENST00000465036 ZCCHC4Q9H5U6 513 aa7.81□□□□□ -1.16
UBR4-209ENST00000465036 SIRT5Q9NXA8 310 aa7.81□□□□□ -1.16
UBR4-209ENST00000465036 N4BP3O15049 544 aa7.8□□□□□ -1.16
UBR4-209ENST00000465036 BMP7P18075 431 aa7.8□□□□□ -1.16
UBR4-209ENST00000465036 SSPNQ14714 243 aa7.8□□□□□ -1.16
UBR4-209ENST00000465036 DACT3Q96B18 629 aaPredicted RBP7.8□□□□□ -1.16
UBR4-209ENST00000465036 PRR13Q9NZ81 148 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms