RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 SMG5Q9UPR3 1016 aaKnown RBP6.49□□□□□ -1.37
PTPN12-210ENST00000464313 TACC3Q9Y6A5 838 aa6.49□□□□□ -1.37
PTPN12-210ENST00000464313 DNAJC25-GNG10A0A024R161 153 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 RALGPS1Q5JS13 557 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 OVOS1Q6IE37 1185 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 C22orf34Q6ZV56 151 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 VPS37DQ86XT2 251 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 REXO1Q8N1G1 1221 aaKnown RBP6.48□□□□□ -1.37
PTPN12-210ENST00000464313 XAGE3Q8WTP9 111 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 SEC16BQ96JE7 1060 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 TMEM87BQ96K49 555 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 TANGO6Q9C0B7 1094 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 EHMT1Q9H9B1 1298 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 ZSWIM5Q9P217 1185 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 ZNRF3Q9ULT6 936 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 MRVI1Q9Y6F6 885 aa6.48□□□□□ -1.37
PTPN12-210ENST00000464313 CHURC1-FNTBB4DL54 471 aa6.47□□□□□ -1.37
PTPN12-210ENST00000464313 ATE1O95260 518 aa6.47□□□□□ -1.37
PTPN12-210ENST00000464313 MED14OSP0DP75 135 aa6.47□□□□□ -1.37
PTPN12-210ENST00000464313 COL9A2Q14055 689 aaPredicted RBP6.47□□□□□ -1.37
PTPN12-210ENST00000464313 PRAMEF13Q5VWM6 474 aa6.47□□□□□ -1.37
PTPN12-210ENST00000464313 GGNQ86UU5 652 aa6.47□□□□□ -1.37
PTPN12-210ENST00000464313 HID1Q8IV36 788 aa6.47□□□□□ -1.37
PTPN12-210ENST00000464313 FAM13CQ8NE31 585 aa6.47□□□□□ -1.37
PTPN12-210ENST00000464313 GMLQ99445 158 aa6.47□□□□□ -1.37
PTPN12-210ENST00000464313 SRRTQ9BXP5 876 aaKnown RBP6.47□□□□□ -1.37
PTPN12-210ENST00000464313 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
PTPN12-210ENST00000464313 NUAK1O60285 661 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 SSBP05455 408 aaKnown RBP eCLIP6.46□□□□□ -1.38
PTPN12-210ENST00000464313 HK2P52789 917 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 LINC00310P59036 64 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 KRTAP1-1Q07627 177 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 TMEM201Q5SNT2 666 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 LSRQ86X29 649 aaPredicted RBP6.46□□□□□ -1.38
PTPN12-210ENST00000464313 MCATQ8IVS2 390 aaKnown RBP6.46□□□□□ -1.38
PTPN12-210ENST00000464313 CPLX3Q8WVH0 158 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 KCNN1Q92952 543 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 SHDQ96IW2 340 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 PARD6AQ9NPB6 346 aa6.46□□□□□ -1.38
PTPN12-210ENST00000464313 SLC22A31A6NKX4 558 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 RAC2P15153 192 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 GLDCP23378 1020 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 TRHRP34981 398 aaPredicted RBP6.45□□□□□ -1.38
PTPN12-210ENST00000464313 ARSHQ5FYA8 562 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 RUFY4Q6ZNE9 571 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 THAP5Q7Z6K1 395 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 MRPL41Q8IXM3 137 aaKnown RBP6.45□□□□□ -1.38
PTPN12-210ENST00000464313 FAM169BQ8N8A8 192 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 SREK1Q8WXA9 508 aaKnown RBP6.45□□□□□ -1.38
PTPN12-210ENST00000464313 MYLIPQ8WY64 445 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 DHX38Q92620 1227 aaKnown RBP6.45□□□□□ -1.38
PTPN12-210ENST00000464313 CCDC120Q96HB5 630 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 IRF2BPLQ9H1B7 796 aa6.45□□□□□ -1.38
PTPN12-210ENST00000464313 PPP1R1BQ9UD71 204 aaPredicted RBP6.45□□□□□ -1.38
PTPN12-210ENST00000464313 FAM86C2PA6NEL3 165 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 MEIS3P2A8K0S8 358 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 WASH4PA8MWX3 477 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 ESR1P03372 595 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 POLR2BP30876 1174 aaKnown RBP6.44□□□□□ -1.38
PTPN12-210ENST00000464313 ETFBP38117 255 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 EIF6P56537 245 aaKnown RBP6.44□□□□□ -1.38
PTPN12-210ENST00000464313 SLC6A19Q695T7 634 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 LETMD1Q6P1Q0 360 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 ATG4CQ96DT6 458 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 TMPRSS5Q9H3S3 457 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 ZNF408Q9H9D4 720 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 GMIPQ9P107 970 aa6.44□□□□□ -1.38
PTPN12-210ENST00000464313 CST3P01034 146 aaPredicted RBP6.43□□□□□ -1.38
PTPN12-210ENST00000464313 CAP2P40123 477 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 GIPRP48546 466 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 KRTAP10-2P60368 255 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 TNK2Q07912 1038 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 MLECQ14165 292 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 SF3A1Q15459 793 aaKnown RBP6.43□□□□□ -1.38
PTPN12-210ENST00000464313 NLRC3Q7RTR2 1065 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 PHACTR4Q8IZ21 702 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 MFSD2AQ8NA29 543 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 SLC26A8Q96RN1 970 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 CRBNQ96SW2 442 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 ADAMTS10Q9H324 1103 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 TMEM59LQ9UK28 342 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 STRIP2Q9ULQ0 834 aa6.43□□□□□ -1.38
PTPN12-210ENST00000464313 A0A0G2JLL6 359 aaPredicted RBP6.42□□□□□ -1.38
PTPN12-210ENST00000464313 HPXP02790 462 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 ACRP10323 421 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 IMPDH2P12268 514 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 NME1P15531 152 aaKnown RBP6.42□□□□□ -1.38
PTPN12-210ENST00000464313 RAG1P15918 1043 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 SYN1P17600 705 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 ATP2B1P20020 1258 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 GTF2F1P35269 517 aaKnown RBP eCLIP6.42□□□□□ -1.38
PTPN12-210ENST00000464313 YARSP54577 528 aaKnown RBP6.42□□□□□ -1.38
PTPN12-210ENST00000464313 CDH24Q86UP0 819 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 SLFN12Q8IYM2 578 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 KIF2CQ99661 725 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 RNF32Q9H0A6 362 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 CNNM2Q9H8M5 875 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 USP35Q9P2H5 1018 aa6.42□□□□□ -1.38
PTPN12-210ENST00000464313 ZYXQ15942 572 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms