RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 CAP2P40123 477 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 USP11P51784 963 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 CDCP2Q5VXM1 449 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 NLRC3Q7RTR2 1065 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 NOP9Q86U38 636 aaKnown RBP8.48□□□□□ -1.05
SSR3-203ENST00000464138 SLFN12Q8IYM2 578 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 WFDC12Q8WWY7 111 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 ACSF2Q96CM8 615 aaPredicted RBP8.48□□□□□ -1.05
SSR3-203ENST00000464138 OSBPL2Q9H1P3 480 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 SSU72Q9NP77 194 aaKnown RBP8.48□□□□□ -1.05
SSR3-203ENST00000464138 ACTR10Q9NZ32 417 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 SLC12A7Q9Y666 1083 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 CDK12Q9NYV4 1490 aaPredicted RBP8.48□□□□□ -1.05
SSR3-203ENST00000464138 MSH6P52701 1360 aa8.48□□□□□ -1.05
SSR3-203ENST00000464138 COL16A1Q07092 1604 aaPredicted RBP8.47□□□□□ -1.05
SSR3-203ENST00000464138 RNGTTO60942 597 aaKnown RBP8.47□□□□□ -1.05
SSR3-203ENST00000464138 ALX3O95076 343 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 HCLS1P14317 486 aaPredicted RBP8.47□□□□□ -1.05
SSR3-203ENST00000464138 ADGRE1Q14246 886 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 CCDC144BQ3MJ40 725 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 OVOS1Q6IE37 1185 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
SSR3-203ENST00000464138 FAM169BQ8N8A8 192 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 FAM13CQ8NE31 585 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 MKL1Q969V6 931 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 TMEM87BQ96K49 555 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 CNNM2Q9H8M5 875 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 FAM105AQ9NUU6 356 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 KLHL3Q9UH77 587 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 PCOLCE2Q9UKZ9 415 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 EFCAB6Q5THR3 1501 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 DUOX2Q9NRD8 1548 aa8.47□□□□□ -1.05
SSR3-203ENST00000464138 SHPRHQ149N8 1683 aa8.46□□□□□ -1.05
SSR3-203ENST00000464138 NCOA3Q9Y6Q9 1424 aa8.46□□□□□ -1.05
SSR3-203ENST00000464138 CHD2O14647 1828 aaKnown RBP8.46□□□□□ -1.06
SSR3-203ENST00000464138 NEFMP07197 916 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 NME1P15531 152 aaKnown RBP8.46□□□□□ -1.06
SSR3-203ENST00000464138 NOS3P29474 1203 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 PREPP48147 710 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 SERINC3Q13530 473 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 MBTPS1Q14703 1052 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 HNRNPLLQ8WVV9 542 aaKnown RBP8.46□□□□□ -1.06
SSR3-203ENST00000464138 ISL2Q96A47 359 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 ATG4CQ96DT6 458 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 FAM46AQ96IP4 442 aaKnown RBP8.46□□□□□ -1.06
SSR3-203ENST00000464138 ANTXR1Q9H6X2 564 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 ZSWIM4Q9H7M6 989 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 TJP2Q9UDY2 1190 aa8.46□□□□□ -1.06
SSR3-203ENST00000464138 TNFRSF10CO14798 259 aa8.45□□□□□ -1.06
SSR3-203ENST00000464138 RAG1P15918 1043 aa8.45□□□□□ -1.06
SSR3-203ENST00000464138 RXRBP28702 533 aa8.45□□□□□ -1.06
SSR3-203ENST00000464138 CCNFP41002 786 aa8.45□□□□□ -1.06
SSR3-203ENST00000464138 IREB2P48200 963 aaKnown RBP8.45□□□□□ -1.06
SSR3-203ENST00000464138 PPP2R5EQ16537 467 aa8.45□□□□□ -1.06
SSR3-203ENST00000464138 FXNQ16595 210 aa8.45□□□□□ -1.06
SSR3-203ENST00000464138 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.45□□□□□ -1.06
SSR3-203ENST00000464138 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.45□□□□□ -1.06
SSR3-203ENST00000464138 ACSS3Q9H6R3 686 aa8.45□□□□□ -1.06
SSR3-203ENST00000464138 LRP6O75581 1613 aa8.44□□□□□ -1.06
SSR3-203ENST00000464138 ARSHQ5FYA8 562 aa8.44□□□□□ -1.06
SSR3-203ENST00000464138 MEX3CQ5U5Q3 659 aaKnown RBP8.44□□□□□ -1.06
SSR3-203ENST00000464138 LRP10Q7Z4F1 713 aa8.44□□□□□ -1.06
SSR3-203ENST00000464138 TTC6Q86TZ1 520 aa8.44□□□□□ -1.06
SSR3-203ENST00000464138 TXNRD3Q86VQ6 643 aa8.44□□□□□ -1.06
SSR3-203ENST00000464138 DZIP1LQ8IYY4 767 aaKnown RBP8.44□□□□□ -1.06
SSR3-203ENST00000464138 SLC26A8Q96RN1 970 aa8.44□□□□□ -1.06
SSR3-203ENST00000464138 ERBINQ96RT1 1412 aa8.44□□□□□ -1.06
SSR3-203ENST00000464138 AHDC1Q5TGY3 1603 aaPredicted RBP8.43□□□□□ -1.06
SSR3-203ENST00000464138 A0A1W2PQH9 124 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 LOC105371045A0A1W2PR82 267 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 CHURC1-FNTBB4DL54 471 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 DNAJA2O60884 412 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 LRIG2O94898 1065 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 CST3P01034 146 aaPredicted RBP8.43□□□□□ -1.06
SSR3-203ENST00000464138 IDI1Q13907 227 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 MAP7Q14244 749 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 RUFY4Q6ZNE9 571 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 PHACTR4Q8IZ21 702 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 MFSD2AQ8NA29 543 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 DHRS1Q96LJ7 313 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 CCDC74BQ96LY2 380 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 UBL7Q96S82 380 aaPredicted RBP8.43□□□□□ -1.06
SSR3-203ENST00000464138 FOXQ1Q9C009 403 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 PHAXQ9H814 394 aaKnown RBP8.43□□□□□ -1.06
SSR3-203ENST00000464138 FBRSQ9HAH7 460 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 LMTK2Q8IWU2 1503 aa8.43□□□□□ -1.06
SSR3-203ENST00000464138 K7ELQ4 463 aaPredicted RBP8.42□□□□□ -1.06
SSR3-203ENST00000464138 RAB6AP20340 208 aa8.42□□□□□ -1.06
SSR3-203ENST00000464138 SLBPQ14493 270 aaKnown RBP eCLIP8.42□□□□□ -1.06
SSR3-203ENST00000464138 NKG7Q16617 165 aa8.42□□□□□ -1.06
SSR3-203ENST00000464138 DDR2Q16832 855 aa8.42□□□□□ -1.06
SSR3-203ENST00000464138 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
SSR3-203ENST00000464138 UTP4Q969X6 686 aaKnown RBP8.42□□□□□ -1.06
SSR3-203ENST00000464138 MRFAP1L1Q96HT8 127 aa8.42□□□□□ -1.06
SSR3-203ENST00000464138 MYRFLQ96LU7 910 aa8.42□□□□□ -1.06
SSR3-203ENST00000464138 KANK1Q14678 1352 aa8.42□□□□□ -1.06
SSR3-203ENST00000464138 MYOM3Q5VTT5 1437 aa8.42□□□□□ -1.06
SSR3-203ENST00000464138 ADGRB3O60242 1522 aa8.41□□□□□ -1.06
SSR3-203ENST00000464138 RGS13O14921 159 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms