RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 MCM5P33992 734 aa22.25■■□□□ 1.15
LMNB1-204ENST00000463908 ZNF296Q8WUU4 475 aaPredicted RBP22.25■■□□□ 1.15
LMNB1-204ENST00000463908 GMCL1Q96IK5 515 aa22.25■■□□□ 1.15
LMNB1-204ENST00000463908 TANGO6Q9C0B7 1094 aa22.25■■□□□ 1.15
LMNB1-204ENST00000463908 RBPJLQ9UBG7 517 aa22.25■■□□□ 1.15
LMNB1-204ENST00000463908 MYH4Q9Y623 1939 aa22.24■■□□□ 1.15
LMNB1-204ENST00000463908 BMP3P12645 472 aa22.24■■□□□ 1.15
LMNB1-204ENST00000463908 CAP1Q01518 475 aa22.24■■□□□ 1.15
LMNB1-204ENST00000463908 KRT32Q14532 448 aa22.24■■□□□ 1.15
LMNB1-204ENST00000463908 SMCR8Q8TEV9 937 aaPredicted RBP22.24■■□□□ 1.15
LMNB1-204ENST00000463908 TXNRD2Q9NNW7 524 aa22.24■■□□□ 1.15
LMNB1-204ENST00000463908 HOXC10Q9NYD6 342 aa22.24■■□□□ 1.15
LMNB1-204ENST00000463908 TNRC18O15417 2968 aaPredicted RBP22.23■■□□□ 1.15
LMNB1-204ENST00000463908 SPDYE16A6NNV3 312 aaPredicted RBP22.23■■□□□ 1.15
LMNB1-204ENST00000463908 CPA1P15085 419 aa22.23■■□□□ 1.15
LMNB1-204ENST00000463908 DSG3P32926 999 aa22.23■■□□□ 1.15
LMNB1-204ENST00000463908 GCLCP48506 637 aaPredicted RBP22.23■■□□□ 1.15
LMNB1-204ENST00000463908 Q3C1V9 767 aa22.23■■□□□ 1.15
LMNB1-204ENST00000463908 LBX2Q6XYB7 198 aa22.23■■□□□ 1.15
LMNB1-204ENST00000463908 DHX32Q7L7V1 743 aaKnown RBP22.23■■□□□ 1.15
LMNB1-204ENST00000463908 ANKRD13CQ8N6S4 541 aa22.23■■□□□ 1.15
LMNB1-204ENST00000463908 MTA3Q9BTC8 594 aa22.23■■□□□ 1.15
LMNB1-204ENST00000463908 ADAMTS5Q9UNA0 930 aa22.23■■□□□ 1.15
LMNB1-204ENST00000463908 MTMR7Q9Y216 660 aa22.23■■□□□ 1.15
LMNB1-204ENST00000463908 CCDC85CA6NKD9 419 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 FKTNO75072 461 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 CNMDO75829 334 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 FLOT1O75955 427 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 SNHG28P0DPA3 235 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 PDHBP11177 359 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 SLC1A4P43007 532 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 SP3Q02447 781 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 TMEM67Q5HYA8 995 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 IFIT1BQ5T764 474 aaKnown RBP22.22■■□□□ 1.15
LMNB1-204ENST00000463908 PNMA1Q8ND90 353 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 JAKMIP1Q96N16 626 aaKnown RBP22.22■■□□□ 1.15
LMNB1-204ENST00000463908 LRRC2Q9BYS8 371 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 KAT14Q9H8E8 782 aa22.22■■□□□ 1.15
LMNB1-204ENST00000463908 WTAPQ15007 396 aa22.21■■□□□ 1.15
LMNB1-204ENST00000463908 KCTD1Q719H9 257 aa22.21■■□□□ 1.15
LMNB1-204ENST00000463908 DCAF4Q8WV16 495 aa22.21■■□□□ 1.15
LMNB1-204ENST00000463908 ATG4CQ96DT6 458 aa22.21■■□□□ 1.15
LMNB1-204ENST00000463908 TCEANC2Q96MN5 208 aa22.21■■□□□ 1.15
LMNB1-204ENST00000463908 LY9Q9HBG7 655 aa22.21■■□□□ 1.15
LMNB1-204ENST00000463908 MORF4L1Q9UBU8 362 aa22.21■■□□□ 1.15
LMNB1-204ENST00000463908 RLFQ13129 1914 aa22.2■■□□□ 1.14
LMNB1-204ENST00000463908 TMEM232C9JQI7 657 aa22.2■■□□□ 1.14
LMNB1-204ENST00000463908 SH2B2O14492 632 aaPredicted RBP22.2■■□□□ 1.14
LMNB1-204ENST00000463908 EIF5BO60841 1220 aaKnown RBP22.2■■□□□ 1.14
LMNB1-204ENST00000463908 CTGFP29279 349 aa22.2■■□□□ 1.14
LMNB1-204ENST00000463908 TTBK2Q6IQ55 1244 aa22.2■■□□□ 1.14
LMNB1-204ENST00000463908 TMEM87BQ96K49 555 aa22.2■■□□□ 1.14
LMNB1-204ENST00000463908 BTBD7Q9P203 1132 aa22.2■■□□□ 1.14
LMNB1-204ENST00000463908 PPP1R9AQ9ULJ8 1098 aa22.2■■□□□ 1.14
LMNB1-204ENST00000463908 ERICH2A1L162 156 aa22.19■■□□□ 1.14
LMNB1-204ENST00000463908 SART3Q15020 963 aaKnown RBP22.19■■□□□ 1.14
LMNB1-204ENST00000463908 PRPF38AQ8NAV1 312 aaKnown RBP22.19■■□□□ 1.14
LMNB1-204ENST00000463908 SLF1Q9BQI6 1058 aa22.19■■□□□ 1.14
LMNB1-204ENST00000463908 ARHGAP39Q9C0H5 1083 aa22.19■■□□□ 1.14
LMNB1-204ENST00000463908 FEM1BQ9UK73 627 aa22.19■■□□□ 1.14
LMNB1-204ENST00000463908 RABGAP1Q9Y3P9 1069 aa22.19■■□□□ 1.14
LMNB1-204ENST00000463908 MYPNQ86TC9 1320 aa22.19■■□□□ 1.14
LMNB1-204ENST00000463908 WDR19Q8NEZ3 1342 aa22.19■■□□□ 1.14
LMNB1-204ENST00000463908 FRMPD2Q68DX3 1309 aaPredicted RBP22.18■■□□□ 1.14
LMNB1-204ENST00000463908 PLA2G6O60733 806 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 HMGB1P09429 215 aaKnown RBP22.18■■□□□ 1.14
LMNB1-204ENST00000463908 LIFRP42702 1097 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 LACTBP83111 547 aaPredicted RBP22.18■■□□□ 1.14
LMNB1-204ENST00000463908 ZNF543Q08ER8 600 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 FAM110CQ1W6H9 321 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 SAMD1Q6SPF0 538 aaPredicted RBP22.18■■□□□ 1.14
LMNB1-204ENST00000463908 GPRC5AQ8NFJ5 357 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 CD99L2Q8TCZ2 262 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 GTF3C2Q8WUA4 911 aaPredicted RBP22.18■■□□□ 1.14
LMNB1-204ENST00000463908 IL17RAQ96F46 866 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 PAGR1Q9BTK6 254 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 ZSWIM6Q9HCJ5 1215 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 GPCPD1Q9NPB8 672 aa22.18■■□□□ 1.14
LMNB1-204ENST00000463908 VWA5AO00534 786 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 GOLGA8HP0CJ92 632 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 PSMA5P28066 241 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 MLLT1Q03111 559 aaPredicted RBP22.17■■□□□ 1.14
LMNB1-204ENST00000463908 TROAPQ12815 778 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 CCDC96Q2M329 555 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 BLOC1S2Q6QNY1 142 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 BTNL9Q6UXG8 535 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 REPS2Q8NFH8 660 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 TM6SF1Q9BZW5 370 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 PDE4DIPQ5VU43 2346 aa22.17■■□□□ 1.14
LMNB1-204ENST00000463908 ECM2O94769 699 aaPredicted RBP22.16■■□□□ 1.14
LMNB1-204ENST00000463908 CASTP20810 708 aaKnown RBP22.16■■□□□ 1.14
LMNB1-204ENST00000463908 RPS6KB1P23443 525 aa22.16■■□□□ 1.14
LMNB1-204ENST00000463908 SLC16A2P36021 539 aa22.16■■□□□ 1.14
LMNB1-204ENST00000463908 RGS19P49795 217 aa22.16■■□□□ 1.14
LMNB1-204ENST00000463908 ERVK-9P63128 1117 aa22.16■■□□□ 1.14
LMNB1-204ENST00000463908 ERVK-24P63145 666 aa22.16■■□□□ 1.14
LMNB1-204ENST00000463908 TMEM132BQ14DG7 1078 aa22.16■■□□□ 1.14
LMNB1-204ENST00000463908 TMTC2Q8N394 836 aa22.16■■□□□ 1.14
LMNB1-204ENST00000463908 CHURC1Q8WUH1 139 aa22.16■■□□□ 1.14
LMNB1-204ENST00000463908 KIFC2Q96AC6 838 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms