RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 E4F1Q66K89 784 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 PTCRAQ6ISU1 281 aaPredicted RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 SLC30A9Q6PML9 568 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 LIAT1Q6ZQX7 453 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 TMEM110Q86TL2 294 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 ORAI2Q96SN7 254 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 RANBP17Q9H2T7 1088 aaKnown RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 DDX19BQ9UMR2 479 aa4.09□□□□□ -1.75
COL8A1-205ENST00000463753 FCF1Q9Y324 198 aaKnown RBP4.09□□□□□ -1.75
COL8A1-205ENST00000463753 CPSF1Q10570 1443 aaKnown RBP4.09□□□□□ -1.76
COL8A1-205ENST00000463753 WDR17Q8IZU2 1322 aa4.09□□□□□ -1.76
COL8A1-205ENST00000463753 A0A1B0GVG6 124 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 ZBTB7AO95365 584 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 DNM1Q05193 864 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 SNCBQ16143 134 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 ACBD5Q5T8D3 534 aaPredicted RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 SOGA3Q5TF21 947 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 CTU1Q7Z7A3 348 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 SYCP3Q8IZU3 236 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 FAM81AQ8TBF8 368 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 ARPC5LQ9BPX5 153 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 LZTS2Q9BRK4 669 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 UPF3BQ9BZI7 483 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 PUF60Q9UHX1 559 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 NCAPD2Q15021 1401 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 SCN11AQ9UI33 1791 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 SPDYE3A6NKU9 549 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 RHOXF2BP0C7M4 288 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 TRIM27P14373 513 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 GSPT1P15170 499 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 CHMLP26374 656 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 ETF1P62495 437 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 PRR20EP86478 221 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 PRR20CP86479 221 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 PRR20DP86480 221 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 PRR20BP86481 221 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 PRR20AP86496 221 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 CDCA2Q69YH5 1023 aaPredicted RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 SH3BP5LQ7L8J4 393 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 SH3RF1Q7Z6J0 888 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 TAX1BP1Q86VP1 789 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 TMEM57Q8N5G2 664 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 FAM71BQ8TC56 605 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 GOLGA1Q92805 767 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 RHOXF2Q9BQY4 288 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 C1QTNF2Q9BXJ5 285 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 IQCGQ9H095 443 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 NAT10Q9H0A0 1025 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 VPS33BQ9H267 617 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 MAPK8IP1Q9UQF2 711 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 MRC1P22897 1456 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC88AQ3V6T2 1871 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 A0A087WWV3 80 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 MAP2K7O14733 419 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 GNAI3P08754 354 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 IFIT2P09913 472 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 LBX1P52954 281 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 ENOX2Q16206 610 aaKnown RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 WLSQ5T9L3 541 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 VPS53Q5VIR6 699 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 ARHGAP22Q7Z5H3 698 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 HOOK3Q86VS8 718 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 SLC17A8Q8NDX2 589 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 RIN2Q8WYP3 895 aaPredicted RBP4.08□□□□□ -1.76
COL8A1-205ENST00000463753 GDAP1L1Q96MZ0 367 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 UNC93B1Q9H1C4 597 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 KAT14Q9H8E8 782 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 ABCB6Q9NP58 842 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 SLC39A2Q9NP94 309 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 RGL1Q9NZL6 768 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 ITGB4P16144 1822 aa4.08□□□□□ -1.76
COL8A1-205ENST00000463753 VPS37CA5D8V6 355 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC151A5D8V7 595 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 ERLIN1O75477 346 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 SASH1O94885 1247 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 GNAT1P11488 350 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 SFPQP23246 707 aaKnown RBP eCLIP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 TXLNAP40222 546 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 PAPOLAP51003 745 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 GNG11P61952 73 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 MPP3Q13368 585 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 MYBPC2Q14324 1141 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 RASA3Q14644 834 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 CASP8Q14790 479 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 ACCSLQ4AC99 568 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC40Q4G0X9 1142 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 SPRYD7Q5W111 196 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 PDXDC2PQ6P474 469 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 MICALCLQ6ZW33 695 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 SAPCD2Q86UD0 394 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 ZNF598Q86UK7 904 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 RBM12BQ8IXT5 1001 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 TCP11Q8WWU5 503 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 THUMPD2Q9BTF0 503 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 HMX1Q9NP08 348 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 DACT1Q9NYF0 836 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 ANKIB1Q9P2G1 1089 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 RIPOR2Q9Y4F9 1068 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 PARP3Q9Y6F1 533 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 TLL2Q9Y6L7 1015 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms