RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-205ENST00000463741 MMP19Q99542 508 aa18.2■□□□□ 0.5
SREBF2-205ENST00000463741 XPNPEP3Q9NQH7 507 aa18.2■□□□□ 0.5
SREBF2-205ENST00000463741 EYSQ5T1H1 3165 aa18.2■□□□□ 0.5
SREBF2-205ENST00000463741 TRIM43BA6NCK2 446 aa18.19■□□□□ 0.5
SREBF2-205ENST00000463741 SMIM22K7EJ46 135 aa18.19■□□□□ 0.5
SREBF2-205ENST00000463741 PGK2P07205 417 aa18.19■□□□□ 0.5
SREBF2-205ENST00000463741 RARBP10826 455 aa18.19■□□□□ 0.5
SREBF2-205ENST00000463741 AMOTL1Q8IY63 956 aa18.19■□□□□ 0.5
SREBF2-205ENST00000463741 TRIM43Q96BQ3 446 aaPredicted RBP18.19■□□□□ 0.5
SREBF2-205ENST00000463741 KIF1BPQ96EK5 621 aa18.19■□□□□ 0.5
SREBF2-205ENST00000463741 FBXO28Q9NVF7 368 aa18.19■□□□□ 0.5
SREBF2-205ENST00000463741 VCANP13611 3396 aa18.19■□□□□ 0.5
SREBF2-205ENST00000463741 PLXNA1Q9UIW2 1896 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 RAD21O60216 631 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 SLC25A27O95847 323 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 PGK1P00558 417 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 ADD2P35612 726 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 CDK8P49336 464 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 SMAD3P84022 425 aaKnown RBP18.18■□□□□ 0.5
SREBF2-205ENST00000463741 TLE2Q04725 743 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 KCTD2Q14681 263 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 C1orf53Q5VUE5 145 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 MAFAQ8NHW3 353 aaPredicted RBP18.18■□□□□ 0.5
SREBF2-205ENST00000463741 MYLIPQ8WY64 445 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 LENG1Q96BZ8 264 aaPredicted RBP18.18■□□□□ 0.5
SREBF2-205ENST00000463741 CCDC17Q96LX7 622 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 SEMA6BQ9H3T3 888 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 PAG1Q9NWQ8 432 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 PHF24Q9UPV7 400 aa18.18■□□□□ 0.5
SREBF2-205ENST00000463741 CLTBP09497 229 aa18.17■□□□□ 0.5
SREBF2-205ENST00000463741 EEF2P13639 858 aaKnown RBP18.17■□□□□ 0.5
SREBF2-205ENST00000463741 RNF180Q86T96 592 aa18.17■□□□□ 0.5
SREBF2-205ENST00000463741 DDRGK1Q96HY6 314 aa18.17■□□□□ 0.5
SREBF2-205ENST00000463741 RNPC3Q96LT9 517 aaKnown RBP18.17■□□□□ 0.5
SREBF2-205ENST00000463741 TINF2Q9BSI4 451 aa18.17■□□□□ 0.5
SREBF2-205ENST00000463741 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■□□□ 13.6
SREBF2-205ENST00000463741 TTYH1Q9H313 450 aaPredicted RBP18.17■□□□□ 0.5
SREBF2-205ENST00000463741 BOLA2Q9H3K6 86 aa18.17■□□□□ 0.5
SREBF2-205ENST00000463741 ZNFX1Q9P2E3 1918 aaKnown RBP18.17■□□□□ 0.5
SREBF2-205ENST00000463741 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
SREBF2-205ENST00000463741 A0A1W2PQ45 241 aaPredicted RBP18.16■□□□□ 0.5
SREBF2-205ENST00000463741 A0A1W2PQY0 241 aa18.16■□□□□ 0.5
SREBF2-205ENST00000463741 USP17L12C9JPN9 530 aa18.16■□□□□ 0.5
SREBF2-205ENST00000463741 USP17L21D6R901 530 aa18.16■□□□□ 0.5
SREBF2-205ENST00000463741 PQBP1O60828 265 aaKnown RBP18.16■□□□□ 0.5
SREBF2-205ENST00000463741 TAL1P17542 331 aaPredicted RBP18.16■□□□□ 0.5
SREBF2-205ENST00000463741 ITGB8P26012 769 aa18.16■□□□□ 0.5
SREBF2-205ENST00000463741 C12orf60Q5U649 245 aa18.16■□□□□ 0.5
SREBF2-205ENST00000463741 RIOX2Q8IUF8 465 aa18.16■□□□□ 0.5
SREBF2-205ENST00000463741 GOPCQ9HD26 462 aa18.16■□□□□ 0.5
SREBF2-205ENST00000463741 NRBP1Q9UHY1 535 aa18.16■□□□□ 0.5
SREBF2-205ENST00000463741 TACC3Q9Y6A5 838 aa18.16■□□□□ 0.5
SREBF2-205ENST00000463741 VWA5AO00534 786 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 HMMRO75330 724 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 CHGBP05060 677 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 AKR1A1P14550 325 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 FOSL2P15408 326 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 RAG1P15918 1043 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 STAT3P40763 770 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 FAM83BQ5T0W9 1011 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 C16orf86Q6ZW13 317 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 PPP1R9AQ9ULJ8 1098 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 ADAMTS5Q9UNA0 930 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 MYH7P12883 1935 aa18.15■□□□□ 0.5
SREBF2-205ENST00000463741 ZNF792Q3KQV3 632 aa18.14■□□□□ 0.49
SREBF2-205ENST00000463741 KANSL2Q9H9L4 492 aa18.14■□□□□ 0.49
SREBF2-205ENST00000463741 ZNF214Q9UL59 606 aaPredicted RBP18.14■□□□□ 0.49
SREBF2-205ENST00000463741 CNPY2Q9Y2B0 182 aa18.14■□□□□ 0.49
SREBF2-205ENST00000463741 SLC4A4Q9Y6R1 1079 aa18.14■□□□□ 0.49
SREBF2-205ENST00000463741 SMCHD1A6NHR9 2005 aa18.14■□□□□ 0.49
SREBF2-205ENST00000463741 SPTBN5Q9NRC6 3674 aaKnown RBP18.13■□□□□ 0.49
SREBF2-205ENST00000463741 EPHB4P54760 987 aa18.13■□□□□ 0.49
SREBF2-205ENST00000463741 DIS3Q9Y2L1 958 aaKnown RBP18.13■□□□□ 0.49
SREBF2-205ENST00000463741 KIAA0355O15063 1070 aa18.12■□□□□ 0.49
SREBF2-205ENST00000463741 ZNF865P0CJ78 1059 aaPredicted RBP18.12■□□□□ 0.49
SREBF2-205ENST00000463741 ATP5JP18859 108 aa18.12■□□□□ 0.49
SREBF2-205ENST00000463741 COPB2P35606 906 aa18.12■□□□□ 0.49
SREBF2-205ENST00000463741 FPGSQ05932 587 aa18.12■□□□□ 0.49
SREBF2-205ENST00000463741 RPAP2Q8IXW5 612 aaPredicted RBP18.12■□□□□ 0.49
SREBF2-205ENST00000463741 REPS2Q8NFH8 660 aa18.12■□□□□ 0.49
SREBF2-205ENST00000463741 NUP88Q99567 741 aaPredicted RBP18.12■□□□□ 0.49
SREBF2-205ENST00000463741 TMEM39AQ9NV64 488 aa18.12■□□□□ 0.49
SREBF2-205ENST00000463741 ZBED9Q6R2W3 1325 aa18.12■□□□□ 0.49
SREBF2-205ENST00000463741 SYNRGQ9UMZ2 1314 aa18.12■□□□□ 0.49
SREBF2-205ENST00000463741 RAB11FIP3O75154 756 aa18.11■□□□□ 0.49
SREBF2-205ENST00000463741 ADAMTS4O75173 837 aa18.11■□□□□ 0.49
SREBF2-205ENST00000463741 SNRNP48Q6IEG0 339 aaKnown RBP18.11■□□□□ 0.49
SREBF2-205ENST00000463741 CTR9Q6PD62 1173 aa18.11■□□□□ 0.49
SREBF2-205ENST00000463741 SIRT2Q8IXJ6 389 aa18.11■□□□□ 0.49
SREBF2-205ENST00000463741 HAUS7Q99871 368 aa18.11■□□□□ 0.49
SREBF2-205ENST00000463741 SLF1Q9BQI6 1058 aa18.11■□□□□ 0.49
SREBF2-205ENST00000463741 TEX13BQ9BXU2 312 aa18.11■□□□□ 0.49
SREBF2-205ENST00000463741 STARD7Q9NQZ5 370 aa18.11■□□□□ 0.49
SREBF2-205ENST00000463741 ARPP21Q9UBL0 812 aaPredicted RBP18.11■□□□□ 0.49
SREBF2-205ENST00000463741 ZHX1Q9UKY1 873 aaPredicted RBP18.11■□□□□ 0.49
SREBF2-205ENST00000463741 GREB1LQ9C091 1923 aaPredicted RBP18.11■□□□□ 0.49
SREBF2-205ENST00000463741 TMEM265A0A087WTH1 108 aa18.1■□□□□ 0.49
SREBF2-205ENST00000463741 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
SREBF2-205ENST00000463741 ACLYP53396 1101 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms