RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 NUP133Q8WUM0 1156 aa16.21■□□□□ 0.19
PHACTR4-203ENST00000463428 CHMP4CQ96CF2 233 aa16.21■□□□□ 0.19
PHACTR4-203ENST00000463428 ZSCAN31Q96LW9 406 aaPredicted RBP16.21■□□□□ 0.19
PHACTR4-203ENST00000463428 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
PHACTR4-203ENST00000463428 MTMR7Q9Y216 660 aa16.21■□□□□ 0.19
PHACTR4-203ENST00000463428 PARP14Q460N5 1801 aa16.21■□□□□ 0.19
PHACTR4-203ENST00000463428 GOLGA8BA8MQT2 603 aa16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 WDR46O15213 610 aaKnown RBP16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 BMP3P12645 472 aa16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 SLC1A4P43007 532 aa16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 HTRA3P83110 453 aa16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 FAM83BQ5T0W9 1011 aa16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 GPAT2Q6NUI2 795 aa16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 BRI3BPQ8WY22 251 aa16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 TMOD4Q9NZQ9 345 aa16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 BAZ2BQ9UIF8 2168 aaKnown RBP16.2■□□□□ 0.18
PHACTR4-203ENST00000463428 GOLGA8AA7E2F4 631 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 GOLGA8HP0CJ92 632 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 CETPP11597 493 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 ADD1P35611 737 aaKnown RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 METAP2P50579 478 aaKnown RBP eCLIP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 CCT2P78371 535 aaKnown RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 SCRN1Q12765 414 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 STK3Q13188 491 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 SLC35G1Q2M3R5 365 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 ASPRV1Q53RT3 343 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 TTBK2Q6IQ55 1244 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 KCTD1Q719H9 257 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 FASTKD5Q7L8L6 764 aaKnown RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 TMX3Q96JJ7 454 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 ZIC5Q96T25 663 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 NAP1L2Q9ULW6 460 aaPredicted RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 FRMPD2Q68DX3 1309 aaPredicted RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 CCL15-CCL14A0A0B4J2E2 113 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 RAD21O60216 631 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 PLA2G6O60733 806 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 PARP1P09874 1014 aaKnown RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 HSPA6P17066 643 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 PPP2R5BQ15173 497 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 NTRK3Q16288 839 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 CCL15Q16663 113 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 RTN1Q16799 776 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 BTNL9Q6UXG8 535 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 GADL1Q6ZQY3 521 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 CATSPERGQ6ZRH7 1159 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 NBPF11Q86T75 865 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 NECAB1Q8N987 351 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 CTCFLQ8NI51 663 aaPredicted RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 PTPN18Q99952 460 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 SLKQ9H2G2 1235 aaPredicted RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 RPAP3Q9H6T3 665 aaPredicted RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 NCOA5Q9HCD5 579 aaKnown RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 SH2B1Q9NRF2 756 aaPredicted RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 AGTPBP1Q9UPW5 1226 aa16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
PHACTR4-203ENST00000463428 MANSC4A6NHS7 340 aaPredicted RBP16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 KLRF2D3W0D1 207 aa16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 PLEKHA8P1O95397 391 aa16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 KIF5BP33176 963 aa16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 FUT2Q10981 343 aa16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 TMTC3Q6ZXV5 915 aa16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 SRBD1Q8N5C6 995 aaKnown RBP16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 GTF3C6Q969F1 213 aa16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 CAPNS2Q96L46 248 aa16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 RBM28Q9NW13 759 aaKnown RBP16.18■□□□□ 0.18
PHACTR4-203ENST00000463428 USP17L15C9J2P7 530 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 BTBD19C9JJ37 291 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 USP17L13C9JLJ4 530 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 TMEM232C9JQI7 657 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 USP17L11C9JVI0 530 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 USP17L18D6R9N7 530 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 USP17L22D6RA61 530 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 USP17L17D6RBQ6 530 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 USP17L19D6RCP7 530 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 USP17L20D6RJB6 530 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 K7ELQ4 463 aaPredicted RBP16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 CYTH3O43739 400 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 SMARCA1P28370 1054 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 KIF23Q02241 960 aaPredicted RBP16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 USP17L24Q0WX57 530 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 CCDC96Q2M329 555 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 ANKRD23Q86SG2 305 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 UBA5Q9GZZ9 404 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 CPVLQ9H3G5 476 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 FBXO28Q9NVF7 368 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 FEM1BQ9UK73 627 aa16.17■□□□□ 0.18
PHACTR4-203ENST00000463428 WDR33Q9C0J8 1336 aaKnown RBP16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 CTDNEP1O95476 244 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 SLC16A2P36021 539 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 TM4SF4P48230 202 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 VEGFBP49765 207 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 GNAQP50148 359 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 INHBEP58166 350 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 NOGQ13253 232 aa16.16■□□□□ 0.18
PHACTR4-203ENST00000463428 CUL4AQ13619 759 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms