RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PEX10O60683 326 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 SDSP20132 328 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 KLRC3Q07444 240 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 NMIQ13287 307 aaPredicted RBP15.53■□□□□ 0.08
HDAC1-203ENST00000463172 FAM83BQ5T0W9 1011 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 MFSD14CQ5VZR4 134 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 DPP9Q86TI2 863 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 TRIB2Q92519 343 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 FAM227BQ96M60 508 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 DEFB118Q96PH6 123 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.53■□□□□ 0.08
HDAC1-203ENST00000463172 MOV10L1Q9BXT6 1211 aaKnown RBP15.53■□□□□ 0.08
HDAC1-203ENST00000463172 PAK6Q9NQU5 681 aaPredicted RBP15.53■□□□□ 0.08
HDAC1-203ENST00000463172 MTMR4Q9NYA4 1195 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 ANAPC4Q9UJX5 808 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 PPP1R9AQ9ULJ8 1098 aa15.53■□□□□ 0.08
HDAC1-203ENST00000463172 IGKV6D-41A0A0C4DH26 115 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 A0A0D9SFI3 127 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 RANBP6O60518 1105 aaKnown RBP15.52■□□□□ 0.08
HDAC1-203ENST00000463172 PCP11498 1178 aaKnown RBP15.52■□□□□ 0.08
HDAC1-203ENST00000463172 GRB14Q14449 540 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 KIAA1755Q5JYT7 1200 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 NCAPG2Q86XI2 1143 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 GMCL1P1Q8NEA9 526 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 USP6NLQ92738 828 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 MKL1Q969V6 931 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 ATG4CQ96DT6 458 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 CEP95Q96GE4 821 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 SLF1Q9BQI6 1058 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 TOMM22Q9NS69 142 aa15.52■□□□□ 0.08
HDAC1-203ENST00000463172 BRCA2P51587 3418 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 FARP2O94887 1054 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-203ENST00000463172 NDUFB10O96000 172 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 HSPD1P10809 573 aaKnown RBP15.51■□□□□ 0.07
HDAC1-203ENST00000463172 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
HDAC1-203ENST00000463172 ERCC3P19447 782 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 NT5C2P49902 561 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-203ENST00000463172 CTDSPL2Q05D32 466 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 FAM47AQ5JRC9 791 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 VPS53Q5VIR6 699 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 POTEEQ6S8J3 1075 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 ABRAQ8N0Z2 381 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 ANKLE1Q8NAG6 615 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 PRPF38AQ8NAV1 312 aaKnown RBP15.51■□□□□ 0.07
HDAC1-203ENST00000463172 RNF41Q9H4P4 317 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-203ENST00000463172 FEM1BQ9UK73 627 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 ISY1Q9ULR0 285 aaKnown RBP15.51■□□□□ 0.07
HDAC1-203ENST00000463172 COL11A1P12107 1806 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-203ENST00000463172 ZNF236Q9UL36 1845 aa15.51■□□□□ 0.07
HDAC1-203ENST00000463172 VWA5AO00534 786 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 ORC4O43929 436 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 ZBED4O75132 1171 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 FGAP02671 866 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 HOXC6P09630 235 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 FDX1P10109 184 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 FCER1AP12319 257 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 STAT3P40763 770 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 SHISA4Q96DD7 197 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 ADAMTS5Q9UNA0 930 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 STX8Q9UNK0 236 aa15.5■□□□□ 0.07
HDAC1-203ENST00000463172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.5■□□□□ 0.07
HDAC1-203ENST00000463172 ZNFX1Q9P2E3 1918 aaKnown RBP15.49■□□□□ 0.07
HDAC1-203ENST00000463172 BMP3P12645 472 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 ADORA2AP29274 412 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 KCTD2Q14681 263 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 TMEM132BQ14DG7 1078 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 MAP3K21Q5TCX8 1036 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 SLFN13Q68D06 897 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 CWC27Q6UX04 472 aaKnown RBP15.49■□□□□ 0.07
HDAC1-203ENST00000463172 LRRC47Q8N1G4 583 aaKnown RBP15.49■□□□□ 0.07
HDAC1-203ENST00000463172 DPF3Q92784 378 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 TEX13BQ9BXU2 312 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 CRISPLD2Q9H0B8 497 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 CEP290O15078 2479 aa15.49■□□□□ 0.07
HDAC1-203ENST00000463172 ZNF213O14771 459 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 FOXP2O15409 715 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 MSCO60682 206 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 SLC1A4P43007 532 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 CACNB2Q08289 660 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-203ENST00000463172 IKQ13123 557 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-203ENST00000463172 RRP12Q5JTH9 1297 aaKnown RBP15.48■□□□□ 0.07
HDAC1-203ENST00000463172 MFSD6Q6ZSS7 791 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 NECAB2Q7Z6G3 386 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 ZNF589Q86UQ0 364 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-203ENST00000463172 FAM160B2Q86V87 743 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 RIOX2Q8IUF8 465 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 CHURC1Q8WUH1 139 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 RUFY2Q8WXA3 655 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 GMCL1Q96IK5 515 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 MMP19Q99542 508 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 FBXO28Q9NVF7 368 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 CTNNA3Q9UI47 895 aa15.48■□□□□ 0.07
HDAC1-203ENST00000463172 FGRP09769 529 aa15.47■□□□□ 0.07
HDAC1-203ENST00000463172 STAT2P52630 851 aa15.47■□□□□ 0.07
HDAC1-203ENST00000463172 TRIM32Q13049 653 aa15.47■□□□□ 0.07
HDAC1-203ENST00000463172 CCL14Q16627 93 aa15.47■□□□□ 0.07
HDAC1-203ENST00000463172 CCDC178Q5BJE1 867 aa15.47■□□□□ 0.07
HDAC1-203ENST00000463172 TTC22Q5TAA0 569 aa15.47■□□□□ 0.07
HDAC1-203ENST00000463172 OLFML2BQ68BL8 750 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms