RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 TOX2Q96NM4 488 aa24.48■■□□□ 1.51
PTPN18-208ENST00000462996 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.48■■□□□ 1.51
PTPN18-208ENST00000462996 TINF2Q9BSI4 451 aa24.48■■□□□ 1.51
PTPN18-208ENST00000462996 REV3LO60673 3130 aa24.48■■□□□ 1.51
PTPN18-208ENST00000462996 ZNF316A6NFI3 1004 aaPredicted RBP24.47■■□□□ 1.51
PTPN18-208ENST00000462996 IPO8O15397 1037 aaKnown RBP24.47■■□□□ 1.51
PTPN18-208ENST00000462996 ADAMTS4O75173 837 aa24.47■■□□□ 1.51
PTPN18-208ENST00000462996 ZNF792Q3KQV3 632 aa24.47■■□□□ 1.51
PTPN18-208ENST00000462996 SAMD1Q6SPF0 538 aaPredicted RBP24.47■■□□□ 1.51
PTPN18-208ENST00000462996 CLEC10AQ8IUN9 316 aa24.47■■□□□ 1.51
PTPN18-208ENST00000462996 SLC44A5Q8NCS7 719 aa24.47■■□□□ 1.51
PTPN18-208ENST00000462996 CHD7Q9P2D1 2997 aa24.47■■□□□ 1.51
PTPN18-208ENST00000462996 PBX2P40425 430 aa24.46■■□□□ 1.51
PTPN18-208ENST00000462996 TMEM179Q6ZVK1 233 aa24.46■■□□□ 1.51
PTPN18-208ENST00000462996 C16orf59Q7L2K0 433 aa24.46■■□□□ 1.51
PTPN18-208ENST00000462996 ATXN2LQ8WWM7 1075 aaKnown RBP24.46■■□□□ 1.51
PTPN18-208ENST00000462996 MMP19Q99542 508 aa24.46■■□□□ 1.51
PTPN18-208ENST00000462996 MCM9Q9NXL9 1143 aa24.46■■□□□ 1.51
PTPN18-208ENST00000462996 NOP58Q9Y2X3 529 aaKnown RBP24.46■■□□□ 1.51
PTPN18-208ENST00000462996 ROBO3Q96MS0 1386 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 MAGEB6P1A0A0J9YX57 407 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 GRXCR1A8MXD5 290 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 DCDC2CA8MYV0 355 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 SLC25A27O95847 323 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 TIMP1P01033 207 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 ACLYP53396 1101 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 TMED8Q6PL24 325 aaPredicted RBP24.45■■□□□ 1.5
PTPN18-208ENST00000462996 FRAT1Q92837 279 aaPredicted RBP24.45■■□□□ 1.5
PTPN18-208ENST00000462996 ASB2Q96Q27 587 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 TSEN34Q9BSV6 310 aaKnown RBP24.45■■□□□ 1.5
PTPN18-208ENST00000462996 PBX4Q9BYU1 374 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 ADAMTS5Q9UNA0 930 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 TMX2Q9Y320 296 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 NCOR1O75376 2440 aa24.45■■□□□ 1.5
PTPN18-208ENST00000462996 CYP2D6P10635 497 aa24.44■■□□□ 1.5
PTPN18-208ENST00000462996 AKR1A1P14550 325 aa24.44■■□□□ 1.5
PTPN18-208ENST00000462996 TMEM57Q8N5G2 664 aa24.44■■□□□ 1.5
PTPN18-208ENST00000462996 GAS2L1Q99501 681 aaPredicted RBP24.44■■□□□ 1.5
PTPN18-208ENST00000462996 PRDM12Q9H4Q4 367 aa24.44■■□□□ 1.5
PTPN18-208ENST00000462996 VCPKMTQ9H867 229 aa24.44■■□□□ 1.5
PTPN18-208ENST00000462996 STARD7Q9NQZ5 370 aa24.44■■□□□ 1.5
PTPN18-208ENST00000462996 TBX21Q9UL17 535 aa24.44■■□□□ 1.5
PTPN18-208ENST00000462996 DIS3Q9Y2L1 958 aaKnown RBP24.44■■□□□ 1.5
PTPN18-208ENST00000462996 XIRP2A4UGR9 3374 aa24.44■■□□□ 1.5
PTPN18-208ENST00000462996 TMEM240Q5SV17 173 aa24.43■■□□□ 1.5
PTPN18-208ENST00000462996 AKNAD1Q5T1N1 836 aa24.43■■□□□ 1.5
PTPN18-208ENST00000462996 RIOX2Q8IUF8 465 aa24.43■■□□□ 1.5
PTPN18-208ENST00000462996 C1orf115Q9H7X2 142 aa24.43■■□□□ 1.5
PTPN18-208ENST00000462996 AKR1B1P15121 316 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 RASIP1Q5U651 963 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 CCSAPQ6IQ19 270 aaPredicted RBP24.42■■□□□ 1.5
PTPN18-208ENST00000462996 MFSD5Q6N075 450 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 KLHDC9Q8NEP7 349 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 ADAMTS19Q8TE59 1207 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 NUP133Q8WUM0 1156 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 SDR42E1Q8WUS8 393 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 DYNLL2Q96FJ2 89 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 CRNKL1Q9BZJ0 848 aaKnown RBP24.42■■□□□ 1.5
PTPN18-208ENST00000462996 ARHGEF10LQ9HCE6 1279 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 FBXO28Q9NVF7 368 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 THEGQ9P2T0 379 aa24.42■■□□□ 1.5
PTPN18-208ENST00000462996 MYH8P13535 1937 aa24.41■■□□□ 1.5
PTPN18-208ENST00000462996 SYNRGQ9UMZ2 1314 aa24.41■■□□□ 1.5
PTPN18-208ENST00000462996 WDR46O15213 610 aaKnown RBP24.41■■□□□ 1.5
PTPN18-208ENST00000462996 ADGRE1Q14246 886 aa24.41■■□□□ 1.5
PTPN18-208ENST00000462996 KCTD2Q14681 263 aa24.41■■□□□ 1.5
PTPN18-208ENST00000462996 KCNA10Q16322 511 aa24.41■■□□□ 1.5
PTPN18-208ENST00000462996 CCDC129Q6ZRS4 1044 aa24.41■■□□□ 1.5
PTPN18-208ENST00000462996 DCP1AQ9NPI6 582 aaPredicted RBP24.41■■□□□ 1.5
PTPN18-208ENST00000462996 BDP1A6H8Y1 2624 aa24.41■■□□□ 1.5
PTPN18-208ENST00000462996 ICA1Q05084 483 aa24.4■■□□□ 1.5
PTPN18-208ENST00000462996 CNPY2Q9Y2B0 182 aa24.4■■□□□ 1.5
PTPN18-208ENST00000462996 MYADML2A6NDP7 307 aa24.39■■□□□ 1.49
PTPN18-208ENST00000462996 MOXD2PA6NHM9 499 aa24.39■■□□□ 1.49
PTPN18-208ENST00000462996 PDE6AP16499 860 aa24.39■■□□□ 1.49
PTPN18-208ENST00000462996 STAT3P40763 770 aa24.39■■□□□ 1.49
PTPN18-208ENST00000462996 CDK7P50613 346 aa24.39■■□□□ 1.49
PTPN18-208ENST00000462996 IRX5P78411 483 aaPredicted RBP24.39■■□□□ 1.49
PTPN18-208ENST00000462996 PPIGQ13427 754 aaKnown RBP eCLIP24.39■■□□□ 1.499e-7■■□□□ 14.5
PTPN18-208ENST00000462996 CCDC85BQ15834 202 aaPredicted RBP24.39■■□□□ 1.49
PTPN18-208ENST00000462996 SLC9C2Q5TAH2 1124 aa24.39■■□□□ 1.49
PTPN18-208ENST00000462996 SWAP70Q9UH65 585 aa24.39■■□□□ 1.49
PTPN18-208ENST00000462996 ZNF214Q9UL59 606 aaPredicted RBP24.39■■□□□ 1.49
PTPN18-208ENST00000462996 SMIM22K7EJ46 135 aa24.38■■□□□ 1.49
PTPN18-208ENST00000462996 VWA5AO00534 786 aa24.38■■□□□ 1.49
PTPN18-208ENST00000462996 SNAI1O95863 264 aaPredicted RBP24.38■■□□□ 1.49
PTPN18-208ENST00000462996 ACRP10323 421 aa24.38■■□□□ 1.49
PTPN18-208ENST00000462996 CSF2RAP15509 400 aa24.38■■□□□ 1.49
PTPN18-208ENST00000462996 PLA2G5P39877 138 aa24.38■■□□□ 1.49
PTPN18-208ENST00000462996 MRPS5P82675 430 aaKnown RBP24.38■■□□□ 1.49
PTPN18-208ENST00000462996 LCORLQ8N3X6 602 aa24.38■■□□□ 1.49
PTPN18-208ENST00000462996 REPS2Q8NFH8 660 aa24.38■■□□□ 1.49
PTPN18-208ENST00000462996 UHRF1Q96T88 793 aaPredicted RBP24.38■■□□□ 1.49
PTPN18-208ENST00000462996 SH2D4AQ9H788 454 aa24.38■■□□□ 1.49
PTPN18-208ENST00000462996 ZNF365Q70YC5 407 aa24.37■■□□□ 1.49
PTPN18-208ENST00000462996 FAM184BQ9ULE4 1060 aa24.37■■□□□ 1.49
PTPN18-208ENST00000462996 ZNF532Q9HCE3 1301 aa24.36■■□□□ 1.49
PTPN18-208ENST00000462996 TCRBV5S4A2TA0A5A2 114 aa24.36■■□□□ 1.49
PTPN18-208ENST00000462996 AACSQ86V21 672 aa24.36■■□□□ 1.49
PTPN18-208ENST00000462996 PPP1R9AQ9ULJ8 1098 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms