RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 CTSWP56202 376 aa4.34□□□□□ -1.71
CD46-210ENST00000462968 NGDNQ8NEJ9 315 aaKnown RBP4.34□□□□□ -1.71
CD46-210ENST00000462968 WDR18Q9BV38 432 aa4.34□□□□□ -1.71
CD46-210ENST00000462968 CRB1P82279 1406 aa4.34□□□□□ -1.71
CD46-210ENST00000462968 ANKARQ7Z5J8 1434 aa4.34□□□□□ -1.71
CD46-210ENST00000462968 TULP4Q9NRJ4 1543 aa4.34□□□□□ -1.71
CD46-210ENST00000462968 ABCA3Q99758 1704 aa4.34□□□□□ -1.71
CD46-210ENST00000462968 WDR90Q96KV7 1748 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 E9PCH4 1651 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 CPDO75976 1380 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 CCDC85CA6NKD9 419 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 EXOC5O00471 708 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 FOXN1O15353 648 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 PHACTR2O75167 634 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 LEFTY1O75610 366 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 GLI1P08151 1106 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 PCSK2P16519 638 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 MZF1P28698 734 aaPredicted RBP4.33□□□□□ -1.72
CD46-210ENST00000462968 CTCFP49711 727 aaPredicted RBP4.33□□□□□ -1.72
CD46-210ENST00000462968 DNM1Q05193 864 aaKnown RBP4.33□□□□□ -1.72
CD46-210ENST00000462968 C8orf34Q49A92 452 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 TMEM132EQ6IEE7 984 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 TOM1L2Q6ZVM7 507 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 STK32AQ8WU08 396 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 C20orf173Q96LM9 149 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 HIRIP3Q9BW71 556 aaPredicted RBP4.33□□□□□ -1.72
CD46-210ENST00000462968 CD320Q9NPF0 282 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 SNX11Q9Y5W9 270 aa4.33□□□□□ -1.72
CD46-210ENST00000462968 PEAK1Q9H792 1746 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 IGSF1Q8N6C5 1336 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 KDM2BQ8NHM5 1336 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 A0A096LPE4 126 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 A0A1W2PPZ6 126 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 NFIBO00712 420 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 TMPRSS2O15393 492 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 AFMP43652 599 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 CCNJLQ8IV13 435 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 SNX29Q8TEQ0 813 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 CORO1BQ9BR76 489 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 DUSP23Q9BVJ7 150 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 SEPT3Q9UH03 358 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 FMN2Q9NZ56 1722 aa4.32□□□□□ -1.72
CD46-210ENST00000462968 PHRF1Q9P1Y6 1649 aaKnown RBP4.32□□□□□ -1.72
CD46-210ENST00000462968 ADGRF5Q8IZF2 1346 aa4.31□□□□□ -1.72
CD46-210ENST00000462968 NPIPB6E9PJ23 425 aa4.31□□□□□ -1.72
CD46-210ENST00000462968 B3GALT4O96024 378 aa4.31□□□□□ -1.72
CD46-210ENST00000462968 GCP02774 474 aa4.31□□□□□ -1.72
CD46-210ENST00000462968 HOXA5P20719 270 aa4.31□□□□□ -1.72
CD46-210ENST00000462968 SAFB2Q14151 953 aaKnown RBP eCLIP4.31□□□□□ -1.72
CD46-210ENST00000462968 COL23A1Q86Y22 540 aaPredicted RBP4.31□□□□□ -1.72
CD46-210ENST00000462968 FBXO15Q8NCQ5 510 aaPredicted RBP4.31□□□□□ -1.72
CD46-210ENST00000462968 ACSBG1Q96GR2 724 aa4.31□□□□□ -1.72
CD46-210ENST00000462968 PRAM1Q96QH2 718 aa4.31□□□□□ -1.72
CD46-210ENST00000462968 FOXD3Q9UJU5 478 aaPredicted RBP4.31□□□□□ -1.72
CD46-210ENST00000462968 CLTCL1P53675 1640 aa4.31□□□□□ -1.72
CD46-210ENST00000462968 COL5A2P05997 1499 aaPredicted RBP4.3□□□□□ -1.72
CD46-210ENST00000462968 USP6P35125 1406 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 C10orf71Q711Q0 1435 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 YTHDC2Q9H6S0 1430 aaKnown RBP4.3□□□□□ -1.72
CD46-210ENST00000462968 EIF3AQ14152 1382 aaKnown RBP4.3□□□□□ -1.72
CD46-210ENST00000462968 PARP4Q9UKK3 1724 aaKnown RBP4.3□□□□□ -1.72
CD46-210ENST00000462968 MED14OSP0DP75 135 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 GRIA4P48058 902 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 LBX1P52954 281 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 ZP2Q05996 745 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 FAM50AQ14320 339 aaKnown RBP4.3□□□□□ -1.72
CD46-210ENST00000462968 SPRED3Q2MJR0 410 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 MPZL3Q6UWV2 235 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 ARHGAP27Q6ZUM4 889 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 FAM214BQ7L5A3 538 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 CLP1Q92989 425 aaKnown RBP4.3□□□□□ -1.72
CD46-210ENST00000462968 HEXIM2Q96MH2 286 aaKnown RBP4.3□□□□□ -1.72
CD46-210ENST00000462968 TCF12Q99081 682 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 POGKQ9P215 609 aa4.3□□□□□ -1.72
CD46-210ENST00000462968 VPS8Q8N3P4 1428 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 PLEKHG2Q9H7P9 1386 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 ALS2Q96Q42 1657 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 PAPPAQ13219 1627 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 WDR17Q8IZU2 1322 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 PRR36Q9H6K5 1346 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 IKZF1Q13422 519 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 KCNA10Q16322 511 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 NOM1Q5C9Z4 860 aaKnown RBP4.29□□□□□ -1.72
CD46-210ENST00000462968 C9orf131Q5VYM1 1079 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 SMYD4Q8IYR2 804 aaPredicted RBP4.29□□□□□ -1.72
CD46-210ENST00000462968 TTC16Q8NEE8 873 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 HELQQ8TDG4 1101 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 ASB11Q8WXH4 323 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 RELTQ969Z4 430 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 KIRREL1Q96J84 757 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 FANCD2OSQ96PS1 177 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 ATXN3LQ9H3M9 355 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 DISC1Q9NRI5 854 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 C19orf73Q9NVV2 129 aa4.29□□□□□ -1.72
CD46-210ENST00000462968 ARHGEF28Q8N1W1 1705 aaKnown RBP4.29□□□□□ -1.72
CD46-210ENST00000462968 TRPM3Q9HCF6 1732 aaPredicted RBP4.29□□□□□ -1.72
CD46-210ENST00000462968 ROCK1Q13464 1354 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 A0A1W2PP55 124 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 ZBTB7CA1YPR0 619 aa4.28□□□□□ -1.72
CD46-210ENST00000462968 VEGFAP15692 232 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms