RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
HDAC6-213ENST00000462730 CMA1P23946 247 aa16.63■□□□□ 0.25
HDAC6-213ENST00000462730 CABP5Q9NP86 173 aa16.63■□□□□ 0.25
HDAC6-213ENST00000462730 BAZ2BQ9UIF8 2168 aaKnown RBP16.62■□□□□ 0.25
HDAC6-213ENST00000462730 TNIP1Q15025 636 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 SASS6Q6UVJ0 657 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 MTMR14Q8NCE2 650 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 FHDC1Q9C0D6 1143 aaPredicted RBP16.62■□□□□ 0.25
HDAC6-213ENST00000462730 ZNF70Q9UC06 446 aaPredicted RBP16.62■□□□□ 0.25
HDAC6-213ENST00000462730 SHTN1A0MZ66 631 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 PALM3A6NDB9 673 aaPredicted RBP16.62■□□□□ 0.25
HDAC6-213ENST00000462730 FAM205CA6NFA0 338 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 TCP10L2B9ZVM9 353 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 ZNF500O60304 480 aaPredicted RBP16.62■□□□□ 0.25
HDAC6-213ENST00000462730 PFKFB1P16118 471 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 ATP2B1P20020 1258 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 NOVP48745 357 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 NLRP5P59047 1200 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 LZTS2Q9BRK4 669 aa16.62■□□□□ 0.25
HDAC6-213ENST00000462730 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.62■□□□□ 0.25
HDAC6-213ENST00000462730 IGKV6D-41A0A0C4DH26 115 aa16.61■□□□□ 0.25
HDAC6-213ENST00000462730 CUTAO60888 179 aa16.61■□□□□ 0.25
HDAC6-213ENST00000462730 PARP1P09874 1014 aaKnown RBP16.61■□□□□ 0.25
HDAC6-213ENST00000462730 GOLGA8HP0CJ92 632 aa16.61■□□□□ 0.25
HDAC6-213ENST00000462730 VEGFAP15692 232 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-213ENST00000462730 NPY5RQ15761 445 aa16.61■□□□□ 0.25
HDAC6-213ENST00000462730 CLEC10AQ8IUN9 316 aa16.61■□□□□ 0.25
HDAC6-213ENST00000462730 CLIC6Q96NY7 704 aa16.61■□□□□ 0.25
HDAC6-213ENST00000462730 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
HDAC6-213ENST00000462730 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.61■□□□□ 0.25
HDAC6-213ENST00000462730 MTMR4Q9NYA4 1195 aa16.61■□□□□ 0.25
HDAC6-213ENST00000462730 PCDHB6Q9Y5E3 794 aa16.61■□□□□ 0.25
HDAC6-213ENST00000462730 FZD9O00144 591 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 MPHOSPH10O00566 681 aaKnown RBP16.6■□□□□ 0.25
HDAC6-213ENST00000462730 EIF6P56537 245 aaKnown RBP16.6■□□□□ 0.25
HDAC6-213ENST00000462730 ANO6Q4KMQ2 910 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 EARS2Q5JPH6 523 aaKnown RBP16.6■□□□□ 0.25
HDAC6-213ENST00000462730 KRI1Q8N9T8 703 aaKnown RBP16.6■□□□□ 0.25
HDAC6-213ENST00000462730 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.252e-6■■□□□ 12.7
HDAC6-213ENST00000462730 TNFRSF25Q93038 417 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 CSRNP1Q96S65 589 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 VEZTQ9HBM0 779 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 MYOZ2Q9NPC6 264 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-213ENST00000462730 KLRF2D3W0D1 207 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 SHC4Q6S5L8 630 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 CEP131Q9UPN4 1083 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 ZKSCAN5Q9Y2L8 839 aa16.6■□□□□ 0.25
HDAC6-213ENST00000462730 MYH4Q9Y623 1939 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 CNTNAP1P78357 1384 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 WNT10BO00744 389 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 CYTH3O43739 400 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 RPS12P25398 132 aaKnown RBP16.59■□□□□ 0.25
HDAC6-213ENST00000462730 NOM1Q5C9Z4 860 aaKnown RBP16.59■□□□□ 0.25
HDAC6-213ENST00000462730 RESP18Q5W5W9 173 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 USP17L2Q6R6M4 530 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 METTL16Q86W50 562 aaKnown RBP16.59■□□□□ 0.25
HDAC6-213ENST00000462730 LRRC47Q8N1G4 583 aaKnown RBP16.59■□□□□ 0.25
HDAC6-213ENST00000462730 FAM200AQ8TCP9 573 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 ZBED3Q96IU2 234 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-213ENST00000462730 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 SDF4Q9BRK5 362 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 SH3GLB2Q9NR46 395 aa16.59■□□□□ 0.25
HDAC6-213ENST00000462730 MYO1BO43795 1136 aa16.58■□□□□ 0.25
HDAC6-213ENST00000462730 ZNF202O95125 648 aa16.58■□□□□ 0.25
HDAC6-213ENST00000462730 TTLL1O95922 423 aa16.58■□□□□ 0.25
HDAC6-213ENST00000462730 CALML3P27482 149 aa16.58■□□□□ 0.25
HDAC6-213ENST00000462730 NBPF9Q3BBW0 867 aa16.58■□□□□ 0.25
HDAC6-213ENST00000462730 CERKLQ49MI3 558 aaPredicted RBP16.58■□□□□ 0.25
HDAC6-213ENST00000462730 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.25
HDAC6-213ENST00000462730 FOXP4Q8IVH2 680 aaPredicted RBP16.58■□□□□ 0.25
HDAC6-213ENST00000462730 SPZ1Q9BXG8 430 aa16.58■□□□□ 0.25
HDAC6-213ENST00000462730 CPVLQ9H3G5 476 aa16.58■□□□□ 0.25
HDAC6-213ENST00000462730 FBXO2Q9UK22 296 aaPredicted RBP16.58■□□□□ 0.25
HDAC6-213ENST00000462730 SRCAPQ6ZRS2 3230 aa16.58■□□□□ 0.25
HDAC6-213ENST00000462730 ZNF541Q9H0D2 1346 aa16.58■□□□□ 0.24
HDAC6-213ENST00000462730 USP17L5A8MUK1 530 aa16.58■□□□□ 0.24
HDAC6-213ENST00000462730 ZNF280AP59817 542 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-213ENST00000462730 SHROOM1Q2M3G4 852 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-213ENST00000462730 WWC2Q6AWC2 1192 aa16.58■□□□□ 0.24
HDAC6-213ENST00000462730 HEATR3Q7Z4Q2 680 aa16.58■□□□□ 0.24
HDAC6-213ENST00000462730 FAM151AQ8WW52 585 aa16.58■□□□□ 0.24
HDAC6-213ENST00000462730 CCDC39Q9UFE4 941 aa16.58■□□□□ 0.24
HDAC6-213ENST00000462730 HPSEQ9Y251 543 aa16.58■□□□□ 0.24
HDAC6-213ENST00000462730 GJA3Q9Y6H8 435 aa16.58■□□□□ 0.24
HDAC6-213ENST00000462730 DICER1Q9UPY3 1922 aaKnown RBP16.58■□□□□ 0.24
HDAC6-213ENST00000462730 FAM237AA0A1B0GTK4 181 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 EGFRP00533 1210 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 PTPREP23469 700 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 SYKP43405 635 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 GMPSP49915 693 aaPredicted RBP16.57■□□□□ 0.24
HDAC6-213ENST00000462730 STX1AQ16623 288 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 DNAJC25Q9H1X3 360 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 PDCL3Q9H2J4 239 aa16.57■□□□□ 0.24
HDAC6-213ENST00000462730 CLIP2Q9UDT6 1046 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms