RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 ELP1O95163 1332 aa17.33■□□□□ 0.36
RPRD1B-203ENST00000462548 LZTS2Q9BRK4 669 aa17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 SPZ1Q9BXG8 430 aa17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 GPCPD1Q9NPB8 672 aa17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 CLIC4Q9Y696 253 aa17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 ZNF543Q08ER8 600 aa17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 TYW1BQ6NUM6 668 aa17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 PGBD1Q96JS3 809 aa17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 ZNF396Q96N95 335 aaPredicted RBP17.32■□□□□ 0.36
RPRD1B-203ENST00000462548 UBE2HP62256 183 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 TNFAIP1Q13829 316 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 CSPP1Q1MSJ5 1256 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 ANGEL2Q5VTE6 544 aaKnown RBP17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 CAVIN1Q6NZI2 390 aaKnown RBP17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 DEFB129Q9H1M3 183 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 CABP5Q9NP86 173 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 RCOR1Q9UKL0 485 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 CFAP45Q9UL16 551 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 ASPRV1Q53RT3 343 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 VAT1LQ9HCJ6 419 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 ZBTB21Q9ULJ3 1066 aa17.31■□□□□ 0.36
RPRD1B-203ENST00000462548 MBD3O95983 291 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 GNL2Q13823 731 aaKnown RBP17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 PPP4R3BQ5MIZ7 849 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 WWC2Q6AWC2 1192 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 KCTD1Q719H9 257 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 NOSTRINQ8IVI9 506 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 FOXP1Q9H334 677 aaPredicted RBP17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 RIOX1Q9H6W3 641 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 TMEM63CQ9P1W3 806 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 FAM205CA6NFA0 338 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 XBP1P17861 261 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 SAFBQ15424 915 aaKnown RBP eCLIP17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 NOM1Q5C9Z4 860 aaKnown RBP17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 EARS2Q5JPH6 523 aaKnown RBP17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 NBPF12Q5TAG4 269 aaPredicted RBP17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 ATL3Q6DD88 541 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 PIGSQ96S52 555 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 RTEL1Q9NZ71 1219 aa17.3■□□□□ 0.36
RPRD1B-203ENST00000462548 SMARCA1P28370 1054 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 CAP2P40123 477 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 ECE1P42892 770 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 PRAMEF18Q5VWM3 479 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 SLFN13Q68D06 897 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 ACER1Q8TDN7 264 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 RAD21O60216 631 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 SLC16A2P36021 539 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 CCDC96Q2M329 555 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 CCDC84Q86UT8 332 aaPredicted RBP17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 TNFRSF25Q93038 417 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 GGA3Q9NZ52 723 aa17.29■□□□□ 0.36
RPRD1B-203ENST00000462548 F5H6K3 240 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 STXBP3O00186 592 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 KRT2P35908 639 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 TOB1P50616 345 aaPredicted RBP17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 KLRC3Q07444 240 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 GSE1Q14687 1217 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 LINC00301Q8NCQ3 95 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 POLR3EQ9NVU0 708 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 NDUFB10O96000 172 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 KIAA1755Q5JYT7 1200 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 ANO1Q5XXA6 986 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 HEATR3Q7Z4Q2 680 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 NUP88Q99567 741 aaPredicted RBP17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 JMJD4Q9H9V9 463 aa17.28■□□□□ 0.36
RPRD1B-203ENST00000462548 NLRP5P59047 1200 aa17.27■□□□□ 0.36
RPRD1B-203ENST00000462548 GPR162Q16538 588 aa17.27■□□□□ 0.36
RPRD1B-203ENST00000462548 ADGRF4Q8IZF3 695 aa17.27■□□□□ 0.36
RPRD1B-203ENST00000462548 GMCL1P1Q8NEA9 526 aa17.27■□□□□ 0.36
RPRD1B-203ENST00000462548 DCAF4Q8WV16 495 aa17.27■□□□□ 0.36
RPRD1B-203ENST00000462548 RRP36Q96EU6 259 aaKnown RBP17.27■□□□□ 0.36
RPRD1B-203ENST00000462548 BARHL2Q9NY43 387 aa17.27■□□□□ 0.36
RPRD1B-203ENST00000462548 ATAD5Q96QE3 1844 aa17.27■□□□□ 0.35
RPRD1B-203ENST00000462548 GPATCH4Q5T3I0 446 aaKnown RBP17.27■□□□□ 0.35
RPRD1B-203ENST00000462548 APOBEC3FQ8IUX4 373 aaKnown RBP17.27■□□□□ 0.35
RPRD1B-203ENST00000462548 GLIS2Q9BZE0 524 aaPredicted RBP17.27■□□□□ 0.35
RPRD1B-203ENST00000462548 SH3GLB2Q9NR46 395 aa17.27■□□□□ 0.35
RPRD1B-203ENST00000462548 POLR2AP24928 1970 aaKnown RBP17.26■□□□□ 0.35
RPRD1B-203ENST00000462548 LIG1P18858 919 aa17.26■□□□□ 0.35
RPRD1B-203ENST00000462548 SLC1A4P43007 532 aa17.26■□□□□ 0.35
RPRD1B-203ENST00000462548 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
RPRD1B-203ENST00000462548 USP17L10C9JJH3 530 aa17.26■□□□□ 0.35
RPRD1B-203ENST00000462548 YEATS4O95619 227 aa17.26■□□□□ 0.35
RPRD1B-203ENST00000462548 PTPAQ15257 358 aa17.26■□□□□ 0.35
RPRD1B-203ENST00000462548 FZD1Q9UP38 647 aa17.26■□□□□ 0.35
RPRD1B-203ENST00000462548 PPP1R11O60927 126 aaPredicted RBP17.25■□□□□ 0.35
RPRD1B-203ENST00000462548 STK38Q15208 465 aa17.25■□□□□ 0.35
RPRD1B-203ENST00000462548 ZSCAN23Q3MJ62 389 aa17.25■□□□□ 0.35
RPRD1B-203ENST00000462548 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
RPRD1B-203ENST00000462548 GMCL1Q96IK5 515 aa17.25■□□□□ 0.35
RPRD1B-203ENST00000462548 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
RPRD1B-203ENST00000462548 PCDHA7Q9UN72 937 aa17.25■□□□□ 0.35
RPRD1B-203ENST00000462548 TMX2Q9Y320 296 aa17.25■□□□□ 0.35
RPRD1B-203ENST00000462548 WNT7AO00755 349 aa17.25■□□□□ 0.35
RPRD1B-203ENST00000462548 SPICE1Q8N0Z3 855 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms