RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 TACC3Q9Y6A5 838 aa22.38■■□□□ 1.17
SLC6A1-204ENST00000462473 KIAA0100Q14667 2235 aaKnown RBP22.37■■□□□ 1.17
SLC6A1-204ENST00000462473 ORC4O43929 436 aa22.37■■□□□ 1.17
SLC6A1-204ENST00000462473 HMGCRP04035 888 aa22.37■■□□□ 1.17
SLC6A1-204ENST00000462473 FGRP09769 529 aa22.37■■□□□ 1.17
SLC6A1-204ENST00000462473 XRCC5P13010 732 aaKnown RBP22.37■■□□□ 1.17
SLC6A1-204ENST00000462473 RRP12Q5JTH9 1297 aaKnown RBP22.37■■□□□ 1.17
SLC6A1-204ENST00000462473 LRRC47Q8N1G4 583 aaKnown RBP22.37■■□□□ 1.17
SLC6A1-204ENST00000462473 PPP1R9AQ9ULJ8 1098 aa22.37■■□□□ 1.17
SLC6A1-204ENST00000462473 SLC15A5A6NIM6 579 aa22.36■■□□□ 1.17
SLC6A1-204ENST00000462473 GJB1P08034 283 aa22.36■■□□□ 1.17
SLC6A1-204ENST00000462473 PTPREP23469 700 aa22.36■■□□□ 1.17
SLC6A1-204ENST00000462473 MAP2K5Q13163 448 aa22.36■■□□□ 1.17
SLC6A1-204ENST00000462473 TRMT44Q8IYL2 757 aaKnown RBP22.36■■□□□ 1.17
SLC6A1-204ENST00000462473 USP6NLQ92738 828 aa22.36■■□□□ 1.17
SLC6A1-204ENST00000462473 STX8Q9UNK0 236 aa22.36■■□□□ 1.17
SLC6A1-204ENST00000462473 ERCC3P19447 782 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 SLFN13Q68D06 897 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 MFSD6Q6ZSS7 791 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 NCAPG2Q86XI2 1143 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 GMCL1P1Q8NEA9 526 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 SHCBP1Q8NEM2 672 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 TRIB2Q92519 343 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 APBA2Q99767 749 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 SLF1Q9BQI6 1058 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 IL17RBQ9NRM6 502 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 ADAMTS5Q9UNA0 930 aa22.35■■□□□ 1.17
SLC6A1-204ENST00000462473 VWA5AO00534 786 aa22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 ZNF213O14771 459 aa22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 NMT2O60551 498 aa22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 ZKSCAN1P17029 563 aaPredicted RBP22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 GJA8P48165 433 aa22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 TRIM32Q13049 653 aa22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 TMEM132BQ14DG7 1078 aa22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 AKNAD1Q5T1N1 836 aa22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 DSCC1Q9BVC3 393 aa22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 RNF41Q9H4P4 317 aaPredicted RBP22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 RBBP6Q7Z6E9 1792 aaKnown RBP22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 HTTP42858 3142 aa22.34■■□□□ 1.17
SLC6A1-204ENST00000462473 STRNO43815 780 aa22.33■■□□□ 1.17
SLC6A1-204ENST00000462473 PCP11498 1178 aaKnown RBP22.33■■□□□ 1.17
SLC6A1-204ENST00000462473 PRPF38AQ8NAV1 312 aaKnown RBP22.33■■□□□ 1.17
SLC6A1-204ENST00000462473 U2AF1L4Q8WU68 220 aaKnown RBP22.33■■□□□ 1.17
SLC6A1-204ENST00000462473 STAG1Q8WVM7 1258 aa22.33■■□□□ 1.17
SLC6A1-204ENST00000462473 MROH8Q9H579 483 aa22.33■■□□□ 1.17
SLC6A1-204ENST00000462473 ISY1Q9ULR0 285 aaKnown RBP22.33■■□□□ 1.17
SLC6A1-204ENST00000462473 CTDP1Q9Y5B0 961 aaPredicted RBP22.33■■□□□ 1.17
SLC6A1-204ENST00000462473 PLXNB2O15031 1838 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 RLFQ13129 1914 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 SGPL1O95470 568 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 SLC25A27O95847 323 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 BMP3P12645 472 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 STAT3P40763 770 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 GRB14Q14449 540 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 CCL14Q16627 93 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 RUFY2Q8WXA3 655 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 KIFC2Q96AC6 838 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 DEFB118Q96PH6 123 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 HMX1Q9NP08 348 aaPredicted RBP22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 CTNNA3Q9UI47 895 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 FEM1BQ9UK73 627 aa22.32■■□□□ 1.16
SLC6A1-204ENST00000462473 RPTORQ8N122 1335 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 CHMLP26374 656 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 SLC1A4P43007 532 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 CENPQQ7L2Z9 268 aaPredicted RBP22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 DPP9Q86TI2 863 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 RIOX2Q8IUF8 465 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 TBC1D10CQ8IV04 446 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 CHMP4CQ96CF2 233 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 SHISA4Q96DD7 197 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 NBPF3Q9H094 633 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 PAK6Q9NQU5 681 aaPredicted RBP22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 MYH4Q9Y623 1939 aa22.31■■□□□ 1.16
SLC6A1-204ENST00000462473 TMEM232C9JQI7 657 aa22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 ZBED4O75132 1171 aa22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 TFRCP02786 760 aaKnown RBP22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 PRKAR2AP13861 404 aaKnown RBP22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 MCCP23508 829 aa22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 ADORA2AP29274 412 aa22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 IMMTQ16891 758 aaKnown RBP22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 IL25Q9H293 177 aa22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 TCP11L1Q9NUJ3 509 aa22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 RAD50Q92878 1312 aa22.3■■□□□ 1.16
SLC6A1-204ENST00000462473 A0A0G2JMZ2 1700 aa22.29■■□□□ 1.16
SLC6A1-204ENST00000462473 HOXC6P09630 235 aa22.29■■□□□ 1.16
SLC6A1-204ENST00000462473 IKQ13123 557 aaPredicted RBP22.29■■□□□ 1.16
SLC6A1-204ENST00000462473 REPS2Q8NFH8 660 aa22.29■■□□□ 1.16
SLC6A1-204ENST00000462473 ESR2Q92731 530 aa22.29■■□□□ 1.16
SLC6A1-204ENST00000462473 GMCL1Q96IK5 515 aa22.29■■□□□ 1.16
SLC6A1-204ENST00000462473 SLC5A4Q9NY91 659 aa22.29■■□□□ 1.16
SLC6A1-204ENST00000462473 ZNF214Q9UL59 606 aaPredicted RBP22.29■■□□□ 1.16
SLC6A1-204ENST00000462473 MTMR7Q9Y216 660 aa22.29■■□□□ 1.16
SLC6A1-204ENST00000462473 FCER1AP12319 257 aa22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 CAPN2P17655 700 aa22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 COPB2P35606 906 aa22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 NOVP48745 357 aa22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 CACNB2Q08289 660 aaPredicted RBP22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 MAP3K21Q5TCX8 1036 aa22.28■■□□□ 1.16
SLC6A1-204ENST00000462473 MFSD14CQ5VZR4 134 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms