RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 FAM47AQ5JRC9 791 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 SLFN13Q68D06 897 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 LBX2Q6XYB7 198 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 CENPQQ7L2Z9 268 aaPredicted RBP10.56□□□□□ -0.72
DDX39B-216ENST00000462421 FAM160B2Q86V87 743 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 PRPF38AQ8NAV1 312 aaKnown RBP10.56□□□□□ -0.72
DDX39B-216ENST00000462421 NEDD1Q8NHV4 660 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 KIFC2Q96AC6 838 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 KRT23Q9C075 422 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 SPATC1LQ9H0A9 340 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 CNNM2Q9H8M5 875 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 MTMR4Q9NYA4 1195 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 PNMA2Q9UL42 364 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 MYH7P12883 1935 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 ZMYM6O95789 1325 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 RPTORQ8N122 1335 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 SALL3Q9BXA9 1300 aa10.56□□□□□ -0.72
DDX39B-216ENST00000462421 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
DDX39B-216ENST00000462421 A0A0D9SFI3 127 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 A0A1W2PRG0 241 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 ERICH2A1L162 156 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 F5H6K3 240 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 MSCO60682 206 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 GJB1P08034 283 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 HSPD1P10809 573 aaKnown RBP10.55□□□□□ -0.72
DDX39B-216ENST00000462421 BMP3P12645 472 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 CTDSPL2Q05D32 466 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 KLRC3Q07444 240 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 MAP2K5Q13163 448 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 SART3Q15020 963 aaKnown RBP10.55□□□□□ -0.72
DDX39B-216ENST00000462421 ALX1Q15699 326 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 TTC22Q5TAA0 569 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 CLEC10AQ8IUN9 316 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 LRRC47Q8N1G4 583 aaKnown RBP10.55□□□□□ -0.72
DDX39B-216ENST00000462421 GMCL1P1Q8NEA9 526 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 DPF3Q92784 378 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 ATG4CQ96DT6 458 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 DDX11Q96FC9 970 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 CEP95Q96GE4 821 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 CCDC136Q96JN2 1154 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 DEFB118Q96PH6 123 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 MMP19Q99542 508 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 UBAC1Q9BSL1 405 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.55□□□□□ -0.72
DDX39B-216ENST00000462421 RBPJLQ9UBG7 517 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 FBXO40Q9UH90 709 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 PPP1R9AQ9ULJ8 1098 aa10.55□□□□□ -0.72
DDX39B-216ENST00000462421 ORC4O43929 436 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 FARP2O94887 1054 aaPredicted RBP10.54□□□□□ -0.72
DDX39B-216ENST00000462421 NDUFB10O96000 172 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 FGAP02671 866 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 PRKAR2AP13861 404 aaKnown RBP10.54□□□□□ -0.72
DDX39B-216ENST00000462421 ERCC3P19447 782 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 EN2P19622 333 aaPredicted RBP10.54□□□□□ -0.72
DDX39B-216ENST00000462421 PTPREP23469 700 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 STAT3P40763 770 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 GJA8P48165 433 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 HAND2P61296 217 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 DDX60LQ5H9U9 1706 aaKnown RBP10.54□□□□□ -0.72
DDX39B-216ENST00000462421 AKNAD1Q5T1N1 836 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 SNRNP48Q6IEG0 339 aaKnown RBP10.54□□□□□ -0.72
DDX39B-216ENST00000462421 RALYLQ86SE5 291 aaKnown RBP10.54□□□□□ -0.72
DDX39B-216ENST00000462421 U2AF1L4Q8WU68 220 aaKnown RBP10.54□□□□□ -0.72
DDX39B-216ENST00000462421 CDK5RAP2Q96SN8 1893 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 MPHOSPH6Q99547 160 aaKnown RBP10.54□□□□□ -0.72
DDX39B-216ENST00000462421 TEX13BQ9BXU2 312 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 PORCNQ9H237 461 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 TXNRD2Q9NNW7 524 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 ANAPC4Q9UJX5 808 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 NR2E3Q9Y5X4 410 aa10.54□□□□□ -0.72
DDX39B-216ENST00000462421 PLIN4Q96Q06 1357 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 POTEFA5A3E0 1075 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 DHX16O60231 1041 aaKnown RBP10.53□□□□□ -0.72
DDX39B-216ENST00000462421 TOP1P11387 765 aaKnown RBP10.53□□□□□ -0.72
DDX39B-216ENST00000462421 ADORA2AP29274 412 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 CTGFP29279 349 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 EVX2Q03828 476 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 MTFR1Q15390 333 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 ABRAQ8N0Z2 381 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 CPXCR1Q8N123 301 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 ANKRD35Q8N283 1001 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 DSCC1Q9BVC3 393 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 MOV10L1Q9BXT6 1211 aaKnown RBP10.53□□□□□ -0.72
DDX39B-216ENST00000462421 UNC93B1Q9H1C4 597 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 KAT14Q9H8E8 782 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 CNPY2Q9Y2B0 182 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 U3KPZ7 1027 aaPredicted RBP10.53□□□□□ -0.72
DDX39B-216ENST00000462421 SIPA1L1O43166 1804 aa10.53□□□□□ -0.72
DDX39B-216ENST00000462421 TMEM232C9JQI7 657 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 VWA5AO00534 786 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 SGPL1O95470 568 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
DDX39B-216ENST00000462421 OAZ1P54368 228 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 GRB14Q14449 540 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 Q3C1V9 767 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 VPS53Q5VIR6 699 aa10.52□□□□□ -0.73
DDX39B-216ENST00000462421 PRPF38BQ5VTL8 546 aaKnown RBP10.52□□□□□ -0.73
DDX39B-216ENST00000462421 NECAB2Q7Z6G3 386 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms