RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ARMT1Q9H993 441 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 PDE6BP35913 854 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 GUCY2FP51841 1108 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 ITKQ08881 620 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
BRCA1-205ENST00000461221 POMGNT1Q8WZA1 660 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 MRPL46Q9H2W6 279 aaKnown RBP9.87□□□□□ -0.83
BRCA1-205ENST00000461221 SLC5A4Q9NY91 659 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 TBC1D7Q9P0N9 293 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 MAGI1Q96QZ7 1491 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-205ENST00000461221 ECM2O94769 699 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-205ENST00000461221 APOEP02649 317 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 PDE6CP51160 858 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 DCAF5Q96JK2 942 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 ST7Q9NRC1 585 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 GGA1Q9UJY5 639 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 TPX2Q9ULW0 747 aaKnown RBP9.87□□□□□ -0.83
BRCA1-205ENST00000461221 EYA2O00167 538 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 SRGAP2BP0DMP2 458 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 TCP1P17987 556 aaKnown RBP9.87□□□□□ -0.83
BRCA1-205ENST00000461221 ESRRGP62508 458 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 C2CD5Q86YS7 1000 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 SUPT20HQ8NEM7 779 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 C1orf112Q9NSG2 853 aa9.87□□□□□ -0.83
BRCA1-205ENST00000461221 KCNK3O14649 394 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 LMNB2Q03252 620 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 SCYL2Q6P3W7 929 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 RSBN1LQ6PCB5 846 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-205ENST00000461221 MED4Q9NPJ6 270 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 ANAPC5Q9UJX4 755 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 PASKQ96RG2 1323 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 ECE1P42892 770 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 CNBD1Q8NA66 436 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 FAM207AQ9NSI2 230 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-205ENST00000461221 HESX1Q9UBX0 185 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 GJA3Q9Y6H8 435 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 PCDH11XQ9BZA7 1347 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 PCDH11YQ9BZA8 1340 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 ARHGEF11O15085 1522 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 PFDN1O60925 122 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 CWF19L2Q2TBE0 894 aaKnown RBP9.86□□□□□ -0.83
BRCA1-205ENST00000461221 GNPTABQ3T906 1256 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 BBS5Q8N3I7 341 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 OR8K1Q8NGG5 319 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 EFHD1Q9BUP0 239 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 POLKQ9UBT6 870 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 SUN1O94901 812 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 IL9RQ01113 521 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 TNNI3KQ59H18 835 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 TRAPPC3LQ5T215 181 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 SPZ1Q9BXG8 430 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 NUB1Q9Y5A7 615 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 ANGPTL3Q9Y5C1 460 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 FPGT-TNNI3KV9GXZ4 949 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 FLT4P35916 1363 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 PTPN23Q9H3S7 1636 aa9.86□□□□□ -0.83
BRCA1-205ENST00000461221 EIF6P56537 245 aaKnown RBP9.85□□□□□ -0.83
BRCA1-205ENST00000461221 SESN3P58005 492 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 IL1RL1Q01638 556 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 BFSP1Q12934 665 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 SNAPC4Q5SXM2 1469 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 ZNF449Q6P9G9 518 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 PPIP5K1Q6PFW1 1433 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 MYOCDQ8IZQ8 938 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 GNGT2O14610 69 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 TMTC4Q5T4D3 741 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 MYCBPQ99417 103 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-205ENST00000461221 NLRC4Q9NPP4 1024 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 ATP8A2Q9NTI2 1148 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 DISP3Q9P2K9 1392 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 RNF8O76064 485 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 KPNA2P52292 529 aaKnown RBP9.85□□□□□ -0.83
BRCA1-205ENST00000461221 ZNF445P59923 1031 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 KRT40Q6A162 431 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 REXO1Q8N1G1 1221 aaKnown RBP9.85□□□□□ -0.83
BRCA1-205ENST00000461221 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-205ENST00000461221 CHMP6Q96FZ7 201 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 KCNJ18B7U540 433 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 GAS7O60861 476 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 LIG4P49917 911 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 KCNJ12Q14500 433 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 NSMFQ6X4W1 530 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 MAP7D3Q8IWC1 876 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 ADPGKQ9BRR6 497 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 ANO3Q9BYT9 981 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 IFT122Q9HBG6 1241 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 CCPG1Q9ULG6 757 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.85□□□□□ -0.83
BRCA1-205ENST00000461221 MAP3K1Q13233 1512 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 GPAA1O43292 621 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 LRMPQ12912 555 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 IDI1Q13907 227 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 JAG2Q9Y219 1238 aa9.85□□□□□ -0.83
BRCA1-205ENST00000461221 PDE8AO60658 829 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 ITGA6P23229 1130 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 SF3A3Q12874 501 aaKnown RBP eCLIP9.84□□□□□ -0.83
BRCA1-205ENST00000461221 ZMAT2Q96NC0 199 aaKnown RBP9.84□□□□□ -0.83
BRCA1-205ENST00000461221 PNMA2Q9UL42 364 aa9.84□□□□□ -0.83
BRCA1-205ENST00000461221 SNX14Q9Y5W7 946 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms