RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 CTAGE1Q96RT6 745 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 JCADQ9P266 1359 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 GOLGA6L7A0A1B0GV03 622 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 E7EVH7 732 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 NAP1L1P55209 391 aaKnown RBP13.97□□□□□ -0.17
AGRN-203ENST00000461111 SATB1Q01826 763 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 RTN1Q16799 776 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 CCDC181Q5TID7 509 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 NOSTRINQ8IVI9 506 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 TSEN2Q8NCE0 465 aaKnown RBP13.97□□□□□ -0.17
AGRN-203ENST00000461111 BCCIPQ9P287 314 aaKnown RBP eCLIP13.97□□□□□ -0.17
AGRN-203ENST00000461111 ZC3H4Q9UPT8 1303 aaKnown RBP13.97□□□□□ -0.17
AGRN-203ENST00000461111 ESYT3A0FGR9 886 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 SHOX2O60902 331 aaPredicted RBP13.97□□□□□ -0.17
AGRN-203ENST00000461111 CKAP4Q07065 602 aaKnown RBP13.97□□□□□ -0.17
AGRN-203ENST00000461111 MFSD6Q6ZSS7 791 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 LACRTQ9GZZ8 138 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 TRMT112Q9UI30 125 aaKnown RBP13.97□□□□□ -0.17
AGRN-203ENST00000461111 FAM184BQ9ULE4 1060 aa13.97□□□□□ -0.17
AGRN-203ENST00000461111 REXO2Q9Y3B8 237 aaKnown RBP13.97□□□□□ -0.17
AGRN-203ENST00000461111 SRCAPQ6ZRS2 3230 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 GRIN2DO15399 1336 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 GBP2P32456 591 aaPredicted RBP13.96□□□□□ -0.17
AGRN-203ENST00000461111 EVA1CP58658 441 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 MB21D2Q8IYB1 491 aaPredicted RBP13.96□□□□□ -0.17
AGRN-203ENST00000461111 TBC1D31Q96DN5 1066 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 LUC7L2Q9Y383 392 aaKnown RBP13.96□□□□□ -0.17
AGRN-203ENST00000461111 TTC26A0AVF1 554 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 FAM170AA1A519 330 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 ERCC5P28715 1186 aaPredicted RBP13.96□□□□□ -0.17
AGRN-203ENST00000461111 PHKA1P46020 1223 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 TTMPQ5BVD1 217 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 APTXQ7Z2E3 356 aaKnown RBP13.96□□□□□ -0.17
AGRN-203ENST00000461111 ANKRD13CQ8N6S4 541 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 MIEF2Q96C03 454 aa13.96□□□□□ -0.17
AGRN-203ENST00000461111 RNPC3Q96LT9 517 aaKnown RBP13.96□□□□□ -0.17
AGRN-203ENST00000461111 PLEKHG1Q9ULL1 1385 aa13.96□□□□□ -0.18
AGRN-203ENST00000461111 TOB1P50616 345 aaPredicted RBP13.96□□□□□ -0.18
AGRN-203ENST00000461111 DPYDQ12882 1025 aa13.96□□□□□ -0.18
AGRN-203ENST00000461111 WTAPQ15007 396 aa13.96□□□□□ -0.18
AGRN-203ENST00000461111 ENOX2Q16206 610 aaKnown RBP13.96□□□□□ -0.18
AGRN-203ENST00000461111 ZSWIM5Q9P217 1185 aa13.96□□□□□ -0.18
AGRN-203ENST00000461111 PALLDQ8WX93 1383 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 GOLGA8KD6RF30 607 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 PEX19P40855 299 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 COPB1P53618 953 aaKnown RBP13.95□□□□□ -0.18
AGRN-203ENST00000461111 HDLBPQ00341 1268 aaKnown RBP13.95□□□□□ -0.18
AGRN-203ENST00000461111 BIRC2Q13490 618 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 CCDC96Q2M329 555 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 KIF6Q6ZMV9 814 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 MICALCLQ6ZW33 695 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 MAATS1Q7Z4T9 603 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 JAG2Q9Y219 1238 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 ITGA6P23229 1130 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 MCAMP43121 646 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 TTF1Q15361 905 aaPredicted RBP13.95□□□□□ -0.18
AGRN-203ENST00000461111 CCDC43Q96MW1 224 aaKnown RBP13.95□□□□□ -0.18
AGRN-203ENST00000461111 CARD10Q9BWT7 1032 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 PRDM11Q9NQV5 511 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
AGRN-203ENST00000461111 SLC4A4Q9Y6R1 1079 aa13.95□□□□□ -0.18
AGRN-203ENST00000461111 KRT86O43790 486 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 PTPREP23469 700 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 CCDC121Q6ZUS5 278 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 OR8K1Q8NGG5 319 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 HAUS4Q9H6D7 363 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 MYO1AQ9UBC5 1043 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 A0A087X0B3 334 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 RCCD1A6NED2 376 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 ZFYP08048 801 aaPredicted RBP13.94□□□□□ -0.18
AGRN-203ENST00000461111 FNTAP49354 379 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 SARSP49591 514 aaKnown RBP13.94□□□□□ -0.18
AGRN-203ENST00000461111 CFAP58Q5T655 872 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 NAA35Q5VZE5 725 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 CCDC13Q8IYE1 715 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 DCAF5Q96JK2 942 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 GREM2Q9H772 168 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 SLC40A1Q9NP59 571 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 PIH1D3Q9NQM4 214 aaKnown RBP13.94□□□□□ -0.18
AGRN-203ENST00000461111 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.94□□□□□ -0.18
AGRN-203ENST00000461111 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
AGRN-203ENST00000461111 KCNJ18B7U540 433 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 ACTN4O43707 911 aaKnown RBP13.94□□□□□ -0.18
AGRN-203ENST00000461111 LSP1P33241 339 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 MCM7P33993 719 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 KCNJ12Q14500 433 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 KRT26Q7Z3Y9 468 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 CCDC51Q96ER9 411 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 PAGE5Q96GU1 130 aa13.94□□□□□ -0.18
AGRN-203ENST00000461111 ITSN1Q15811 1721 aa13.93□□□□□ -0.18
AGRN-203ENST00000461111 ODF2Q5BJF6 829 aa13.93□□□□□ -0.18
AGRN-203ENST00000461111 KANK3Q6NY19 840 aa13.93□□□□□ -0.18
AGRN-203ENST00000461111 ZIM3Q96PE6 472 aa13.93□□□□□ -0.18
AGRN-203ENST00000461111 UBN2Q6ZU65 1347 aa13.93□□□□□ -0.18
AGRN-203ENST00000461111 CCDC189A1A4V9 331 aa13.93□□□□□ -0.18
AGRN-203ENST00000461111 ATF3P18847 181 aa13.93□□□□□ -0.18
AGRN-203ENST00000461111 TRIM21P19474 475 aaKnown RBP13.93□□□□□ -0.18
AGRN-203ENST00000461111 HERVK_113P62684 666 aa13.93□□□□□ -0.18
AGRN-203ENST00000461111 ZNF473Q8WTR7 871 aaKnown RBP13.93□□□□□ -0.18
AGRN-203ENST00000461111 SDR42E1Q8WUS8 393 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms