RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 PRC1O43663 620 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 PLA2G6O60733 806 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 TBC1D8O95759 1140 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 PDHBP11177 359 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 HERVK_113P62684 666 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 TROAPQ12815 778 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 TAF1CQ15572 869 aaPredicted RBP9.61□□□□□ -0.87
SND1-202ENST00000461056 CCDC178Q5BJE1 867 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 FAM83BQ5T0W9 1011 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 RNF20Q5VTR2 975 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 BTNL9Q6UXG8 535 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 CHST3Q7LGC8 479 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 SGMS1Q86VZ5 419 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 PARK7Q99497 189 aaKnown RBP9.61□□□□□ -0.87
SND1-202ENST00000461056 TM6SF1Q9BZW5 370 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 FBXO28Q9NVF7 368 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 TMOD4Q9NZQ9 345 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 TSKSQ9UJT2 592 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 STX8Q9UNK0 236 aa9.61□□□□□ -0.87
SND1-202ENST00000461056 GPR25O00155 361 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 PEX10O60683 326 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 CPA1P15085 419 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 MCM5P33992 734 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 LIFRP42702 1097 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 EVCP57679 992 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 ANAPC15P60006 121 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 ZNF543Q08ER8 600 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 KRT32Q14532 448 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 SLFN13Q68D06 897 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 OTUD7BQ6GQQ9 843 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
SND1-202ENST00000461056 PNMA1Q8ND90 353 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 ZNF296Q8WUU4 475 aaPredicted RBP9.6□□□□□ -0.87
SND1-202ENST00000461056 DCAF4Q8WV16 495 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 NEK1Q96PY6 1258 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 GOPCQ9HD26 462 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 TOMM22Q9NS69 142 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 BTBD7Q9P203 1132 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 PPP1R9AQ9ULJ8 1098 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 NID2Q14112 1375 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 BRCA2P51587 3418 aa9.6□□□□□ -0.87
SND1-202ENST00000461056 ZKSCAN1P17029 563 aaPredicted RBP9.59□□□□□ -0.87
SND1-202ENST00000461056 RPS6KB1P23443 525 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 MCCP23508 829 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 CTCFP49711 727 aaPredicted RBP9.59□□□□□ -0.87
SND1-202ENST00000461056 RBM25P49756 843 aaKnown RBP9.59□□□□□ -0.87
SND1-202ENST00000461056 ATP2B2Q01814 1243 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 TRDNQ13061 729 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 PABPC4Q13310 644 aaKnown RBP eCLIP9.59□□□□□ -0.87
SND1-202ENST00000461056 FAM110CQ1W6H9 321 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 RALYLQ86SE5 291 aaKnown RBP9.59□□□□□ -0.87
SND1-202ENST00000461056 IQCA1Q86XH1 822 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 ATG4CQ96DT6 458 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 TMEM87BQ96K49 555 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 JAKMIP1Q96N16 626 aaKnown RBP9.59□□□□□ -0.87
SND1-202ENST00000461056 UBAC1Q9BSL1 405 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 BACH2Q9BYV9 841 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 ZFYVE28Q9HCC9 887 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 CPA4Q9UI42 421 aa9.59□□□□□ -0.87
SND1-202ENST00000461056 ZNF214Q9UL59 606 aaPredicted RBP9.59□□□□□ -0.87
SND1-202ENST00000461056 ZNF536O15090 1300 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 MYH8P13535 1937 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 PALM3A6NDB9 673 aaPredicted RBP9.58□□□□□ -0.88
SND1-202ENST00000461056 VWA5AO00534 786 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 IFIT3O14879 490 aaKnown RBP9.58□□□□□ -0.88
SND1-202ENST00000461056 ATP2A1O14983 1001 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 IGHA2P01877 340 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 HMGB1P09429 215 aaKnown RBP9.58□□□□□ -0.88
SND1-202ENST00000461056 BMP3P12645 472 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 GCLCP48506 637 aaPredicted RBP9.58□□□□□ -0.88
SND1-202ENST00000461056 LACTBP83111 547 aaPredicted RBP9.58□□□□□ -0.88
SND1-202ENST00000461056 FUT2Q10981 343 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 TOB2Q14106 344 aaPredicted RBP9.58□□□□□ -0.88
SND1-202ENST00000461056 COG2Q14746 738 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 GRM4Q14833 912 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 TMEM132BQ14DG7 1078 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 Q3C1V9 767 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 TMEM67Q5HYA8 995 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 IFIT1BQ5T764 474 aaKnown RBP9.58□□□□□ -0.88
SND1-202ENST00000461056 TTBK2Q6IQ55 1244 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.58□□□□□ -0.88
SND1-202ENST00000461056 MTMR8Q96EF0 704 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 TCEANC2Q96MN5 208 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 MAP3K14Q99558 947 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 SLF1Q9BQI6 1058 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 LRRC2Q9BYS8 371 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 ARHGAP39Q9C0H5 1083 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 ALDH8A1Q9H2A2 487 aaPredicted RBP9.58□□□□□ -0.88
SND1-202ENST00000461056 SLC38A10Q9HBR0 1119 aa9.58□□□□□ -0.88
SND1-202ENST00000461056 PRDM10Q9NQV6 1147 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms