RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PRKAR2AP13861 404 aaKnown RBP15.68■□□□□ 0.1
RAB11FIP3-207ENST00000461009 MAP2K5Q13163 448 aa15.68■□□□□ 0.1
RAB11FIP3-207ENST00000461009 MFSD14CQ5VZR4 134 aa15.68■□□□□ 0.1
RAB11FIP3-207ENST00000461009 NECAB2Q7Z6G3 386 aa15.68■□□□□ 0.1
RAB11FIP3-207ENST00000461009 TRIB2Q92519 343 aa15.68■□□□□ 0.1
RAB11FIP3-207ENST00000461009 CRISPLD2Q9H0B8 497 aa15.68■□□□□ 0.1
RAB11FIP3-207ENST00000461009 ZNF213O14771 459 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 CNMDO75829 334 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 EEF2P13639 858 aaKnown RBP15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 RASA1P20936 1047 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 PTPREP23469 700 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 PLS1Q14651 629 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 PPP4R3BQ5MIZ7 849 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 KIAA1211Q6ZU35 1233 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 UBE2Q1Q7Z7E8 422 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 DPP9Q86TI2 863 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 SKAP1Q86WV1 359 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 SPICE1Q8N0Z3 855 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 USP6NLQ92738 828 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 BTBD7Q9P203 1132 aa15.67■□□□□ 0.1
RAB11FIP3-207ENST00000461009 H0YGN5 161 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 SGSM2O43147 1006 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 EVI5O60447 810 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 TSPY3P0CV98 308 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 TSPY8P0CW00 308 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 PCP11498 1178 aaKnown RBP15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 DSG3P32926 999 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 CTDSPL2Q05D32 466 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 IMMTQ16891 758 aaKnown RBP15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 SHCBP1Q8NEM2 672 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 SPATC1LQ9H0A9 340 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 RNF41Q9H4P4 317 aaPredicted RBP15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 MROH8Q9H579 483 aa15.66■□□□□ 0.1
RAB11FIP3-207ENST00000461009 PRDM1O75626 825 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 NT5C2P49902 561 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 TFAP4Q01664 338 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 TRIM32Q13049 653 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 MAP3K21Q5TCX8 1036 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 POTEEQ6S8J3 1075 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 MFSD6Q6ZSS7 791 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 SIAH1Q8IUQ4 282 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 PAWRQ96IZ0 340 aaKnown RBP15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 NBPF3Q9H094 633 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 TOMM22Q9NS69 142 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 BRCA2P51587 3418 aa15.65■□□□□ 0.1
RAB11FIP3-207ENST00000461009 TSPY2A6NKD2 308 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 ORC4O43929 436 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 SLC25A27O95847 323 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 FGRP09769 529 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 HAND2P61296 217 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 CACNB2Q08289 660 aaPredicted RBP15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 GRB14Q14449 540 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 HABP4Q5JVS0 413 aaKnown RBP15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 AKNAD1Q5T1N1 836 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 NCAPG2Q86XI2 1143 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 CLEC10AQ8IUN9 316 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 NEDD1Q8NHV4 660 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 MOV10L1Q9BXT6 1211 aaKnown RBP15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 NYAP2Q9P242 653 aa15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 CTDP1Q9Y5B0 961 aaPredicted RBP15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
RAB11FIP3-207ENST00000461009 RANBP6O60518 1105 aaKnown RBP15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 MSCO60682 206 aa15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 CDC45O75419 566 aa15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 HOXC6P09630 235 aa15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 ERCC3P19447 782 aa15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 COPB2P35606 906 aa15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 CCL14Q16627 93 aa15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 ESYT1Q9BSJ8 1104 aa15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 OGDHLQ9ULD0 1010 aa15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 PLXNB2O15031 1838 aa15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 MKI67P46013 3256 aaKnown RBP15.63■□□□□ 0.09
RAB11FIP3-207ENST00000461009 TTLL1O95922 423 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 FCER1AP12319 257 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 ADORA2AP29274 412 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 CNGA1P29973 690 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 FAM47AQ5JRC9 791 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 RRP12Q5JTH9 1297 aaKnown RBP15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 KIAA1755Q5JYT7 1200 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 ABRAQ8N0Z2 381 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 STAG1Q8WVM7 1258 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 ATG4CQ96DT6 458 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 C11orf49Q9H6J7 331 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 CLIP2Q9UDT6 1046 aa15.62■□□□□ 0.09
RAB11FIP3-207ENST00000461009 PTH1RQ03431 593 aa15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 FAM83BQ5T0W9 1011 aa15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 ESR2Q92731 530 aa15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 CEP95Q96GE4 821 aa15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 IL25Q9H293 177 aa15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 INCENPQ9NQS7 918 aa15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 MTMR4Q9NYA4 1195 aa15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 PPP1R9AQ9ULJ8 1098 aa15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 SYNPO2Q9UMS6 1093 aa15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 COLQQ9Y215 455 aaPredicted RBP15.61■□□□□ 0.09
RAB11FIP3-207ENST00000461009 IGKV6D-41A0A0C4DH26 115 aa15.6■□□□□ 0.09
RAB11FIP3-207ENST00000461009 F5H6K3 240 aa15.6■□□□□ 0.09
RAB11FIP3-207ENST00000461009 CCND3P30281 292 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms