RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ADGRB1O14514 1584 aa6.6□□□□□ -1.35
ATPAF1-203ENST00000460928 RGS12O14924 1447 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 FAM135BQ49AJ0 1406 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 YTHDC2Q9H6S0 1430 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 XRN1Q8IZH2 1706 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 LRP6O75581 1613 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 DAB2P98082 770 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 IFI16Q16666 785 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 TMC4Q7Z404 712 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 FAM181AQ8N9Y4 354 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 RNF214Q8ND24 703 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 C3orf58Q8NDZ4 430 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 STK35Q8TDR2 534 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 FAM161BQ96MY7 647 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 C8orf37Q96NL8 207 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 HIRIP3Q9BW71 556 aaPredicted RBP6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 MRS2Q9HD23 443 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 RNF19AQ9NV58 838 aa6.59□□□□□ -1.35
ATPAF1-203ENST00000460928 JCADQ9P266 1359 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 TRPM1Q7Z4N2 1603 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 NWD1Q149M9 1564 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 SCAMP3O14828 347 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 SORBS3O60504 671 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 RNGTTO60942 597 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 CD8BP10966 210 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 OXCT1P55809 520 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 ZC3H6P61129 1189 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 JAG1P78504 1218 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 BNIP3Q12983 259 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 ENOX2Q16206 610 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 LDLRAD1Q5T700 205 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 ATG4DQ86TL0 474 aaPredicted RBP6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 TMEM87AQ8NBN3 555 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 ISL2Q96A47 359 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 PRAM1Q96QH2 718 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 U3KQE9 123 aa6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.58□□□□□ -1.36
ATPAF1-203ENST00000460928 LRPPRCP42704 1394 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 DIP2AQ14689 1571 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 PNMA6FA0A0J9YX94 578 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 LEFTY1O75610 366 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 CEACAM5P06731 702 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 C8AP07357 584 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 ERCC5P28715 1186 aaPredicted RBP6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 PSMD2Q13200 908 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 ALG1LQ6GMV1 187 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 NXPE4Q6UWF7 544 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 FBF1Q8TES7 1133 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 ANKRD24Q8TF21 1146 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 DDX17Q92841 729 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 NECAB3Q96P71 396 aaPredicted RBP6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 SETDB2Q96T68 719 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 SRCIN1Q9C0H9 1055 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 TNKS2Q9H2K2 1166 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 CEP350Q5VT06 3117 aa6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 ROCK2O75116 1388 aaKnown RBP6.57□□□□□ -1.36
ATPAF1-203ENST00000460928 NALCNQ8IZF0 1738 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 TMEM265A0A087WTH1 108 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 HDLBPQ00341 1268 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 C9orf131Q5VYM1 1079 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 MAP1SQ66K74 1059 aaPredicted RBP6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 SCARA3Q6AZY7 606 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 GPBAR1Q8TDU6 330 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 HRASLS5Q96KN8 279 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 POGKQ9P215 609 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 PPM1HQ9ULR3 514 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 AKAP2Q9Y2D5 859 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 ARHGEF28Q8N1W1 1705 aaKnown RBP6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 ABCC11Q96J66 1382 aa6.56□□□□□ -1.36
ATPAF1-203ENST00000460928 IGF2BP3O00425 579 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 RNASE1P07998 156 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 GSTT1P30711 240 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 NTF4P34130 210 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 NAALADL2Q58DX5 795 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 DRC1Q96MC2 740 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 CARD11Q9BXL7 1154 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 MBNL3Q9NUK0 354 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 VTI1BQ9UEU0 232 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 ADAMTS6Q9UKP5 1117 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 PLAGL2Q9UPG8 496 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 SNX11Q9Y5W9 270 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 PIK3R4Q99570 1358 aa6.55□□□□□ -1.36
ATPAF1-203ENST00000460928 LAMC1P11047 1609 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 NHSL1Q5SYE7 1610 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 NKTRP30414 1462 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 RALGAPBQ86X10 1494 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 KIAA1210Q9ULL0 1709 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 ENC1O14682 589 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 TRIM37O94972 964 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 BMP6P22004 513 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 RING1Q06587 406 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 AOC3Q16853 763 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 ERICH6BQ5W0A0 696 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 ARHGAP27Q6ZUM4 889 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 FAM214BQ7L5A3 538 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 TOP6BLQ8N6T0 577 aa6.54□□□□□ -1.36
ATPAF1-203ENST00000460928 SREK1Q8WXA9 508 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms