RNA–Protein interactions for RNA: ENST00000460820.6

ATP5C1-204, Transcript of ATP synthase subunit gamma, mitochondrial, human

TSL 2

Gene ATP5C1, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP5C1-204	ENST00000460820	LETM1	O95202	739 aa	Predicted RBP	13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	SMARCA1	P28370	1054 aa		13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	NOV	P48745	357 aa		13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	SLC4A8	Q2Y0W8	1093 aa		13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	KRT40	Q6A162	431 aa		13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	NBPF11	Q86T75	865 aa		13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	ZBED2	Q9BTP6	218 aa		13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	BRMS1	Q9HCU9	246 aa		13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	STX8	Q9UNK0	236 aa		13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	ATRNL1	Q5VV63	1379 aa		13.65	□□□□□ -0.22
ATP5C1-204	ENST00000460820	ADAMTSL1	Q8N6G6	1762 aa		13.64	□□□□□ -0.23
ATP5C1-204	ENST00000460820	NMT2	O60551	498 aa		13.64	□□□□□ -0.23
ATP5C1-204	ENST00000460820	EIF6	P56537	245 aa	Known RBP	13.64	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GRM4	Q14833	912 aa		13.64	□□□□□ -0.23
ATP5C1-204	ENST00000460820	METTL16	Q86W50	562 aa	Known RBP	13.64	□□□□□ -0.23
ATP5C1-204	ENST00000460820	SLC44A5	Q8NCS7	719 aa		13.64	□□□□□ -0.23
ATP5C1-204	ENST00000460820	TMEM47	Q9BQJ4	181 aa		13.64	□□□□□ -0.23
ATP5C1-204	ENST00000460820	FOXP1	Q9H334	677 aa	Predicted RBP	13.64	□□□□□ -0.23
ATP5C1-204	ENST00000460820	HERC5	Q9UII4	1024 aa	Known RBP	13.64	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GOLGA8CP	A6NN73	597 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	TTLL1	O95922	423 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	MMP1	P03956	469 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	U2AF2	P26368	475 aa	Known RBP eCLIP	13.63	□□□□□ -0.23	6e-10	■■■■■ 40.1
ATP5C1-204	ENST00000460820	GUCY1B3	Q02153	619 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	KIF23	Q02241	960 aa	Predicted RBP	13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CXCL9	Q07325	125 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	NFIA	Q12857	509 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	LEO1	Q8WVC0	666 aa	Predicted RBP	13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	FAM151A	Q8WW52	585 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	PRMT6	Q96LA8	375 aa	Predicted RBP	13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	TDRD3	Q9H7E2	651 aa	Known RBP	13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	SH3GLB2	Q9NR46	395 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	MTMR4	Q9NYA4	1195 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	FAM198A	Q9UFP1	575 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	RCOR1	Q9UKL0	485 aa		13.63	□□□□□ -0.23
ATP5C1-204	ENST00000460820	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	NFKBIE	O00221	500 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	DTNB	O60941	627 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	YEATS4	O95619	227 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	PARP1	P09874	1014 aa	Known RBP	13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	SHMT1	P34896	483 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	TNNI2	P48788	182 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	PTPN5	P54829	565 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	FUT2	Q10981	343 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CERKL	Q49MI3	558 aa	Predicted RBP	13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	L1TD1	Q5T7N2	865 aa	Known RBP	13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CAVIN1	Q6NZI2	390 aa	Known RBP	13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	FAM83A	Q86UY5	434 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GPT2	Q8TD30	523 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	KCNG4	Q8TDN1	519 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	DPF2	Q92785	391 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CEP95	Q96GE4	821 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GDPD2	Q9HCC8	539 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	POLR3E	Q9NVU0	708 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	RTEL1	Q9NZ71	1219 aa		13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820		V9GY48	417 aa	Predicted RBP	13.62	□□□□□ -0.23
ATP5C1-204	ENST00000460820	IGKV6D-41	A0A0C4DH26	115 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	PALM3	A6NDB9	673 aa	Predicted RBP	13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CALML3	P27482	149 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	TCP10	Q12799	353 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	TNFAIP1	Q13829	316 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	ASPRV1	Q53RT3	343 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	MYSM1	Q5VVJ2	828 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GALNT17	Q6IS24	598 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	TATDN1	Q6P1N9	297 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CCDC82	Q8N4S0	544 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	JMY	Q8N9B5	988 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	SPZ1	Q9BXG8	430 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GZF1	Q9H116	711 aa	Predicted RBP	13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	KANSL2	Q9H9L4	492 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CABP5	Q9NP86	173 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	TFIP11	Q9UBB9	837 aa	Known RBP	13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	ZNF70	Q9UC06	446 aa	Predicted RBP	13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	SYNPO2	Q9UMS6	1093 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CNTNAP5	Q8WYK1	1306 aa		13.61	□□□□□ -0.23
ATP5C1-204	ENST00000460820	COL4A5	P29400	1685 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GOLGA6L3	A6NEY3	463 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	hCG_1984214	I3L0E3	225 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	FZD9	O00144	591 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	PPFIA3	O75145	1194 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	PLEKHA8P1	O95397	391 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	SCG2	P13521	617 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	AKR1B1	P15121	316 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	ZNF280A	P59817	542 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	ZNF445	P59923	1031 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	SF3A1	Q15459	793 aa	Known RBP	13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	PFKFB3	Q16875	520 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CCDC183	Q5T5S1	534 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	TMEM179	Q6ZVK1	233 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	NOSTRIN	Q8IVI9	506 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	SRBD1	Q8N5C6	995 aa	Known RBP	13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	ZNF713	Q8N859	430 aa	Predicted RBP	13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CCDC148	Q8NFR7	591 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	MYOZ2	Q9NPC6	264 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	NYAP2	Q9P242	653 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	MAD2L2	Q9UI95	211 aa		13.6	□□□□□ -0.23
ATP5C1-204	ENST00000460820	CEP131	Q9UPN4	1083 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms