RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 SKOR2Q2VWA4 1001 aaPredicted RBP18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 USP50Q70EL3 339 aaPredicted RBP18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 USP48Q86UV5 1035 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 PIBF1Q8WXW3 757 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 ZNF396Q96N95 335 aaPredicted RBP18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 PHF20Q9BVI0 1012 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 ZNF341Q9BYN7 854 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 GDPD2Q9HCC8 539 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 GPCPD1Q9NPB8 672 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 SH3GLB2Q9NR46 395 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 VPS54Q9P1Q0 977 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 KCNJ14Q9UNX9 436 aa18.29■□□□□ 0.52
PCYT1A-212ENST00000460677 A0A1W2PRG0 241 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 FIBPO43427 364 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 TRAK2O60296 914 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 SLC1A4P43007 532 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 GNL2Q13823 731 aaKnown RBP18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 DCPSQ96C86 337 aaKnown RBP18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 SHISA4Q96DD7 197 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 RRP36Q96EU6 259 aaKnown RBP18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 GMCL1Q96IK5 515 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 SCAND2PQ9GZW5 306 aaPredicted RBP18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 UBA5Q9GZZ9 404 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 FOXP1Q9H334 677 aaPredicted RBP18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 CPVLQ9H3G5 476 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 CFAP45Q9UL16 551 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 TMX2Q9Y320 296 aa18.28■□□□□ 0.52
PCYT1A-212ENST00000460677 RAD21O60216 631 aa18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 NDUFB10O96000 172 aa18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 EPHX2P34913 555 aa18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 SUPT20HL1Q3ZLR7 823 aa18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 PRAMEF18Q5VWM3 479 aa18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 DIS3L2Q8IYB7 885 aaKnown RBP18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 FAM177A1Q8N128 213 aaPredicted RBP18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 SH2D4AQ9H788 454 aa18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 TFIP11Q9UBB9 837 aaKnown RBP18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 ZNF112Q9UJU3 913 aa18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 TCHHQ07283 1943 aa18.27■□□□□ 0.51
PCYT1A-212ENST00000460677 MYH15Q9Y2K3 1946 aa18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 BTBD18B2RXH4 712 aa18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 VEGFAP15692 232 aaPredicted RBP18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 ECE1P42892 770 aa18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 MYSM1Q5VVJ2 828 aa18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 TTBK2Q6IQ55 1244 aa18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 KCTD1Q719H9 257 aa18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 ACER1Q8TDN7 264 aa18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 ZC3H15Q8WU90 426 aaKnown RBP18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 VAT1LQ9HCJ6 419 aa18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 SEC63Q9UGP8 760 aaKnown RBP18.26■□□□□ 0.51
PCYT1A-212ENST00000460677 IQCA1LA6NCM1 817 aa18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 KRT2P35908 639 aa18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 WWC2Q6AWC2 1192 aa18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 NOSTRINQ8IVI9 506 aa18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 SULF1Q8IWU6 871 aa18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 BRMS1Q9HCU9 246 aa18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 BARHL2Q9NY43 387 aa18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 BAZ2BQ9UIF8 2168 aaKnown RBP18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 ELP1O95163 1332 aa18.25■□□□□ 0.51
PCYT1A-212ENST00000460677 ATAD5Q96QE3 1844 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 hCG_1984214I3L0E3 225 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 STXBP3O00186 592 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 BMP3P12645 472 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 CALML3P27482 149 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 INPP5BP32019 993 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 NLRP5P59047 1200 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 HEATR3Q7Z4Q2 680 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 HOMER1Q86YM7 354 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 ADGRF4Q8IZF3 695 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 ZNF713Q8N859 430 aaPredicted RBP18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 LEO1Q8WVC0 666 aaPredicted RBP18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 GPKOWQ92917 476 aaPredicted RBP eCLIP18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 SPATA32Q96LK8 384 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 PIGSQ96S52 555 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 JMJD4Q9H9V9 463 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 ISY1Q9ULR0 285 aaKnown RBP18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 DDX49Q9Y6V7 483 aaKnown RBP18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 SCN4AP35499 1836 aa18.24■□□□□ 0.51
PCYT1A-212ENST00000460677 SLC16A2P36021 539 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 NPY5RQ15761 445 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 SCYL3Q8IZE3 742 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 CCDC148Q8NFR7 591 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 OXER1Q8TDS5 423 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 MTMR8Q96EF0 704 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 USP28Q96RU2 1077 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 WRNIP1Q96S55 665 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 TAF1DQ9H5J8 278 aaPredicted RBP18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 RTEL1Q9NZ71 1219 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 SSC5DA1L4H1 1573 aa18.23■□□□□ 0.51
PCYT1A-212ENST00000460677 POLR2AP24928 1970 aaKnown RBP18.22■□□□□ 0.51
PCYT1A-212ENST00000460677 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
PCYT1A-212ENST00000460677 NR5A1Q13285 461 aa18.22■□□□□ 0.51
PCYT1A-212ENST00000460677 KLHL40Q2TBA0 621 aa18.22■□□□□ 0.51
PCYT1A-212ENST00000460677 GALNT17Q6IS24 598 aa18.22■□□□□ 0.51
PCYT1A-212ENST00000460677 KRT26Q7Z3Y9 468 aa18.22■□□□□ 0.51
PCYT1A-212ENST00000460677 CCDC12Q8WUD4 166 aaPredicted RBP18.22■□□□□ 0.51
PCYT1A-212ENST00000460677 KLRG1Q96E93 195 aa18.22■□□□□ 0.51
PCYT1A-212ENST00000460677 NUP88Q99567 741 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms