RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 ZNFX1Q9P2E3 1918 aaKnown RBP13.17□□□□□ -0.3
VAMP7-203ENST00000460621 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
VAMP7-203ENST00000460621 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 WDR46O15213 610 aaKnown RBP13.16□□□□□ -0.3
VAMP7-203ENST00000460621 SEPT4O43236 478 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 MS4A1P11836 297 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 RASA1P20936 1047 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 ITGB8P26012 769 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 STK11IPQ8N1F8 1099 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 MB21D1Q8N884 522 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 CCDC17Q96LX7 622 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 NUP88Q99567 741 aaPredicted RBP13.16□□□□□ -0.3
VAMP7-203ENST00000460621 MROH8Q9H579 483 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 ZNF214Q9UL59 606 aaPredicted RBP13.16□□□□□ -0.3
VAMP7-203ENST00000460621 CUL9Q8IWT3 2517 aa13.16□□□□□ -0.3
VAMP7-203ENST00000460621 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
VAMP7-203ENST00000460621 LAMA2P24043 3122 aaKnown RBP13.15□□□□□ -0.3
VAMP7-203ENST00000460621 VWA5AO00534 786 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 DLL1O00548 723 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 MSCO60682 206 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 ADCYAP1R1P41586 468 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 SNX17Q15036 470 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 LRRC41Q15345 812 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 ZNF792Q3KQV3 632 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 TRIM60Q495X7 471 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 FAM83BQ5T0W9 1011 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 RIOX2Q8IUF8 465 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 ABRAQ8N0Z2 381 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 FERMT2Q96AC1 680 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 LENG1Q96BZ8 264 aaPredicted RBP13.15□□□□□ -0.3
VAMP7-203ENST00000460621 GUCD1Q96NT3 240 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 KANSL2Q9H9L4 492 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 EPB41L4AQ9HCS5 686 aaPredicted RBP13.15□□□□□ -0.3
VAMP7-203ENST00000460621 ATP11BQ9Y2G3 1177 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 MYH8P13535 1937 aa13.15□□□□□ -0.3
VAMP7-203ENST00000460621 LTBP2Q14767 1821 aa13.14□□□□□ -0.31
VAMP7-203ENST00000460621 IGKV6D-41A0A0C4DH26 115 aa13.14□□□□□ -0.31
VAMP7-203ENST00000460621 TRIM43BA6NCK2 446 aa13.14□□□□□ -0.31
VAMP7-203ENST00000460621 ZNF865P0CJ78 1059 aaPredicted RBP13.14□□□□□ -0.31
VAMP7-203ENST00000460621 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
VAMP7-203ENST00000460621 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
VAMP7-203ENST00000460621 SHHQ15465 462 aa13.14□□□□□ -0.31
VAMP7-203ENST00000460621 TRIM43Q96BQ3 446 aaPredicted RBP13.14□□□□□ -0.31
VAMP7-203ENST00000460621 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.14□□□□□ -0.31
VAMP7-203ENST00000460621 PPP1R9AQ9ULJ8 1098 aa13.14□□□□□ -0.31
VAMP7-203ENST00000460621 STXBP5LQ9Y2K9 1186 aa13.14□□□□□ -0.31
VAMP7-203ENST00000460621 MYH7P12883 1935 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 M0R2C6 588 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
VAMP7-203ENST00000460621 FCER1AP12319 257 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 STAT3P40763 770 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 ARRDC4Q8NCT1 418 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 OTUD7AQ8TE49 926 aaPredicted RBP13.13□□□□□ -0.31
VAMP7-203ENST00000460621 MMP19Q99542 508 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 DCTPP1Q9H773 170 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 PDLIM7Q9NR12 457 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 ECHDC1Q9NTX5 307 aa13.13□□□□□ -0.31
VAMP7-203ENST00000460621 SLC25A27O95847 323 aa13.12□□□□□ -0.31
VAMP7-203ENST00000460621 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
VAMP7-203ENST00000460621 NDUFB10O96000 172 aa13.12□□□□□ -0.31
VAMP7-203ENST00000460621 PGK1P00558 417 aa13.12□□□□□ -0.31
VAMP7-203ENST00000460621 EPHB4P54760 987 aa13.12□□□□□ -0.31
VAMP7-203ENST00000460621 KBTBD3Q8NAB2 608 aa13.12□□□□□ -0.31
VAMP7-203ENST00000460621 BADQ92934 168 aa13.12□□□□□ -0.31
VAMP7-203ENST00000460621 FGD4Q96M96 766 aa13.12□□□□□ -0.31
VAMP7-203ENST00000460621 SEC62Q99442 399 aaKnown RBP13.12□□□□□ -0.31
VAMP7-203ENST00000460621 TINF2Q9BSI4 451 aa13.12□□□□□ -0.31
VAMP7-203ENST00000460621 PHF24Q9UPV7 400 aa13.12□□□□□ -0.31
VAMP7-203ENST00000460621 MINDY4BA8MYZ0 360 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 F5H6K3 240 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 RNF113AO15541 343 aaKnown RBP13.11□□□□□ -0.31
VAMP7-203ENST00000460621 ADCY6O43306 1168 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 PRDM1O75626 825 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 TLE2Q04725 743 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 KLRC3Q07444 240 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 FAM161BQ96MY7 647 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
VAMP7-203ENST00000460621 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 NYAP2Q9P242 653 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 ARPP21Q9UBL0 812 aaPredicted RBP13.11□□□□□ -0.31
VAMP7-203ENST00000460621 TACC3Q9Y6A5 838 aa13.11□□□□□ -0.31
VAMP7-203ENST00000460621 ROBO3Q96MS0 1386 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 DNAJC25-GNG10A0A024R161 153 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 MYADML2A6NDP7 307 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 KBTBD13C9JR72 458 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 FOXP2O15409 715 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 GPAA1O43292 621 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 RAD21O60216 631 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 ADAMTS4O75173 837 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 C1orf53Q5VUE5 145 aa13.1□□□□□ -0.31
VAMP7-203ENST00000460621 FAM109BQ6ICB4 259 aaPredicted RBP13.1□□□□□ -0.31
VAMP7-203ENST00000460621 CCSAPQ6IQ19 270 aaPredicted RBP13.1□□□□□ -0.31
VAMP7-203ENST00000460621 APPBP2Q92624 585 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms