RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CST3P01034 146 aaPredicted RBP5.39□□□□□ -1.55
RFC4-211ENST00000460408 CYP7A1P22680 504 aa5.39□□□□□ -1.55
RFC4-211ENST00000460408 VPS37DQ86XT2 251 aa5.39□□□□□ -1.55
RFC4-211ENST00000460408 PIWIL2Q8TC59 973 aaKnown RBP5.39□□□□□ -1.55
RFC4-211ENST00000460408 EHMT1Q9H9B1 1298 aa5.39□□□□□ -1.55
RFC4-211ENST00000460408 TACC3Q9Y6A5 838 aa5.39□□□□□ -1.55
RFC4-211ENST00000460408 ATE1O95260 518 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 HK2P52789 917 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 ETF1P62495 437 aaKnown RBP5.38□□□□□ -1.55
RFC4-211ENST00000460408 CLCQ05315 142 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 PRAMEF13Q5VWM6 474 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 ARMC5Q96C12 935 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.38□□□□□ -1.55
RFC4-211ENST00000460408 ADAMTS10Q9H324 1103 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 SP110Q9HB58 689 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 STRIP2Q9ULQ0 834 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 ZNRF3Q9ULT6 936 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 PPT2Q9UMR5 302 aa5.38□□□□□ -1.55
RFC4-211ENST00000460408 ADAMTS20P59510 1910 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 RBAK-RBAKDNI3L0D1 243 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 ZNF165P49910 485 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 UBXN4Q92575 508 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 RELTQ969Z4 430 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 SHDQ96IW2 340 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 IRF2BPLQ9H1B7 796 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 PARD6AQ9NPB6 346 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 PCDHB14Q9Y5E9 798 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 CORINQ9Y5Q5 1042 aa5.37□□□□□ -1.55
RFC4-211ENST00000460408 GRIN3BO60391 1043 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 HTR3BO95264 441 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 ATP2B1P20020 1258 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 MCM4P33991 863 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 GAB4Q2WGN9 574 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 TMEM201Q5SNT2 666 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 DIEXFQ68CQ4 756 aaKnown RBP5.36□□□□□ -1.55
RFC4-211ENST00000460408 CCDC81Q6ZN84 652 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 GK5Q6ZS86 529 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 CDH24Q86UP0 819 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 IRF2BP1Q8IU81 584 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 RBBP8NLQ8NC74 664 aaPredicted RBP5.36□□□□□ -1.55
RFC4-211ENST00000460408 RNF32Q9H0A6 362 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 DUSP15Q9H1R2 295 aaPredicted RBP5.36□□□□□ -1.55
RFC4-211ENST00000460408 ZNF408Q9H9D4 720 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 USP35Q9P2H5 1018 aa5.36□□□□□ -1.55
RFC4-211ENST00000460408 MEIS3P2A8K0S8 358 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 PEX10O60683 326 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 DNAJA2O60884 412 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 GRK4P32298 578 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 TRHRP34981 398 aaPredicted RBP5.35□□□□□ -1.55
RFC4-211ENST00000460408 GIPRP48546 466 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 DLG4P78352 724 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 CREG2Q8IUH2 290 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 LILRA2Q8N149 483 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 PDZD8Q8NEN9 1154 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 BAHD1Q8TBE0 780 aaPredicted RBP5.35□□□□□ -1.55
RFC4-211ENST00000460408 XAGE3Q8WTP9 111 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 DHX38Q92620 1227 aaKnown RBP5.35□□□□□ -1.55
RFC4-211ENST00000460408 Q96M66 194 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 SRRTQ9BXP5 876 aaKnown RBP5.35□□□□□ -1.55
RFC4-211ENST00000460408 MCOLN1Q9GZU1 580 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 REV1Q9UBZ9 1251 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 ADAM30Q9UKF2 790 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 JAG2Q9Y219 1238 aa5.35□□□□□ -1.55
RFC4-211ENST00000460408 MYOCOSA0A1B0GUC4 107 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 WASH4PA8MWX3 477 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 SEMA7AO75326 666 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 IMPDH2P12268 514 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 TPP2P29144 1249 aaPredicted RBP5.34□□□□□ -1.55
RFC4-211ENST00000460408 ETV3P41162 512 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 PDE4BQ07343 736 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 RBL2Q08999 1139 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 MRPL41Q8IXM3 137 aaKnown RBP5.34□□□□□ -1.55
RFC4-211ENST00000460408 FAM169BQ8N8A8 192 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 FERD3LQ96RJ6 166 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 KRTAP17-1Q9BYP8 105 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 SLC6A17Q9H1V8 727 aa5.34□□□□□ -1.55
RFC4-211ENST00000460408 SSBP05455 408 aaKnown RBP eCLIP5.33□□□□□ -1.56
RFC4-211ENST00000460408 PGRP06401 933 aa5.33□□□□□ -1.56
RFC4-211ENST00000460408 ZGLP1P0C6A0 271 aa5.33□□□□□ -1.56
RFC4-211ENST00000460408 PLCG1P19174 1290 aa5.33□□□□□ -1.56
RFC4-211ENST00000460408 GTF2F1P35269 517 aaKnown RBP eCLIP5.33□□□□□ -1.56
RFC4-211ENST00000460408 ETFBP38117 255 aa5.33□□□□□ -1.56
RFC4-211ENST00000460408 NR0B2Q15466 257 aa5.33□□□□□ -1.56
RFC4-211ENST00000460408 LSRQ86X29 649 aaPredicted RBP5.33□□□□□ -1.56
RFC4-211ENST00000460408 ACSF2Q96CM8 615 aaPredicted RBP5.33□□□□□ -1.56
RFC4-211ENST00000460408 TRIT1Q9H3H1 467 aaKnown RBP5.33□□□□□ -1.56
RFC4-211ENST00000460408 ZCCHC4Q9H5U6 513 aa5.33□□□□□ -1.56
RFC4-211ENST00000460408 ANTXR1Q9H6X2 564 aa5.33□□□□□ -1.56
RFC4-211ENST00000460408 TJP2Q9UDY2 1190 aa5.33□□□□□ -1.56
RFC4-211ENST00000460408 MRVI1Q9Y6F6 885 aa5.33□□□□□ -1.56
RFC4-211ENST00000460408 A0A0G2JLL6 359 aaPredicted RBP5.32□□□□□ -1.56
RFC4-211ENST00000460408 BMP7P18075 431 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 EIF6P56537 245 aaKnown RBP5.32□□□□□ -1.56
RFC4-211ENST00000460408 TIGD5Q53EQ6 642 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 SLC6A19Q695T7 634 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 OVOS1Q6IE37 1185 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 MCATQ8IVS2 390 aaKnown RBP5.32□□□□□ -1.56
RFC4-211ENST00000460408 OXR1Q8N573 874 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 OR6P1Q8NGX9 317 aa5.32□□□□□ -1.56
RFC4-211ENST00000460408 DNAJB8Q8NHS0 232 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms