RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 VCPKMTQ9H867 229 aa11.42□□□□□ -0.58
TNC-204ENST00000460345 GPCPD1Q9NPB8 672 aa11.42□□□□□ -0.58
TNC-204ENST00000460345 MAD2L2Q9UI95 211 aa11.42□□□□□ -0.58
TNC-204ENST00000460345 DOCK1Q14185 1865 aa11.42□□□□□ -0.58
TNC-204ENST00000460345 PTPDC1A2A3K4 754 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 KLRF2D3W0D1 207 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 TOMM70O94826 608 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 SNHG28P0DPA3 235 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 BMP3P12645 472 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 IFNAR1P17181 557 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 GJB2P29033 226 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 USP14P54578 494 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 BACE1P56817 501 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 HMGN5P82970 282 aaKnown RBP11.41□□□□□ -0.58
TNC-204ENST00000460345 AKAP17AQ02040 695 aaKnown RBP11.41□□□□□ -0.58
TNC-204ENST00000460345 PPATQ06203 517 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 SSRP1Q08945 709 aaKnown RBP11.41□□□□□ -0.58
TNC-204ENST00000460345 ZNF543Q08ER8 600 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 MTMR2Q13614 643 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 NTRK3Q16288 839 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 GPATCH4Q5T3I0 446 aaKnown RBP11.41□□□□□ -0.58
TNC-204ENST00000460345 LDLRAD1Q5T700 205 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 CST9Q5W186 159 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 KCTD1Q719H9 257 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 ERO1BQ86YB8 467 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 SRBD1Q8N5C6 995 aaKnown RBP11.41□□□□□ -0.58
TNC-204ENST00000460345 FAM184AQ8NB25 1140 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 ZNF784Q8NCA9 323 aaPredicted RBP11.41□□□□□ -0.58
TNC-204ENST00000460345 RBM46Q8TBY0 533 aaKnown RBP11.41□□□□□ -0.58
TNC-204ENST00000460345 PHKBQ93100 1093 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 NUP88Q99567 741 aaPredicted RBP11.41□□□□□ -0.58
TNC-204ENST00000460345 LZTS2Q9BRK4 669 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 KIAA1683Q9H0B3 1180 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 CWC22Q9HCG8 908 aaKnown RBP11.41□□□□□ -0.58
TNC-204ENST00000460345 AFG3L2Q9Y4W6 797 aa11.41□□□□□ -0.58
TNC-204ENST00000460345 SPDYE5A6NIY4 337 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 UNCXA6NJT0 531 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 C19orf81C9J6K1 198 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 IKQ13123 557 aaPredicted RBP11.4□□□□□ -0.58
TNC-204ENST00000460345 KIAA1755Q5JYT7 1200 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 TTBK2Q6IQ55 1244 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 TRIM22Q8IYM9 498 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 SMARCC2Q8TAQ2 1214 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 OPTNQ96CV9 577 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 UBA5Q9GZZ9 404 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 VAT1LQ9HCJ6 419 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 TMOD4Q9NZQ9 345 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 ORC3Q9UBD5 711 aaPredicted RBP11.4□□□□□ -0.58
TNC-204ENST00000460345 KIF3AQ9Y496 699 aa11.4□□□□□ -0.58
TNC-204ENST00000460345 PAPPA2Q9BXP8 1791 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 TMEM232C9JQI7 657 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 FMNL1O95466 1100 aaPredicted RBP11.39□□□□□ -0.59
TNC-204ENST00000460345 SLC16A2P36021 539 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 HMGCS2P54868 508 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 HUNKP57058 714 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 PPIL2Q13356 520 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 DGKZQ13574 1117 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 FAM83BQ5T0W9 1011 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 NBPF11Q86T75 865 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 PIBF1Q8WXW3 757 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 LPAR1Q92633 364 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 CPVLQ9H3G5 476 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
TNC-204ENST00000460345 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
TNC-204ENST00000460345 PASKQ96RG2 1323 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 OTOFQ9HC10 1997 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 hCG_1642624A0A1W2PR95 340 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 CXCL11O14625 94 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 IRF6O14896 467 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 WDR46O15213 610 aaKnown RBP11.38□□□□□ -0.59
TNC-204ENST00000460345 PRPF3O43395 683 aaKnown RBP11.38□□□□□ -0.59
TNC-204ENST00000460345 FDPSP14324 419 aaKnown RBP11.38□□□□□ -0.59
TNC-204ENST00000460345 SMARCA1P28370 1054 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 FOSBP53539 338 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 FUT2Q10981 343 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 LARP1BQ659C4 914 aaKnown RBP11.38□□□□□ -0.59
TNC-204ENST00000460345 SAMD1Q6SPF0 538 aaPredicted RBP11.38□□□□□ -0.59
TNC-204ENST00000460345 CHURC1Q8WUH1 139 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 WASF1Q92558 559 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 SPZ1Q9BXG8 430 aa11.38□□□□□ -0.59
TNC-204ENST00000460345 RNF26Q9BY78 433 aaPredicted RBP11.38□□□□□ -0.59
TNC-204ENST00000460345 CNTNAP5Q8WYK1 1306 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 STK36Q9NRP7 1315 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 CYTH3O43739 400 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 DEXIO95424 95 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 VCAM1P19320 739 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 STAT2P52630 851 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 FSTL1Q12841 308 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
TNC-204ENST00000460345 SH3D19Q5HYK7 790 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 SYDE2Q5VT97 1194 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 GADL1Q6ZQY3 521 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 HOMER1Q86YM7 354 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 ADGRF4Q8IZF3 695 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 RRP36Q96EU6 259 aaKnown RBP11.37□□□□□ -0.59
TNC-204ENST00000460345 WNK4Q96J92 1243 aa11.37□□□□□ -0.59
TNC-204ENST00000460345 C12orf42Q96LP6 360 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms