RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 IL17RBQ9NRM6 502 aa25.64■■□□□ 1.7
SSNA1-202ENST00000459860 TCP11L1Q9NUJ3 509 aa25.64■■□□□ 1.7
SSNA1-202ENST00000459860 SRRDQ9UH36 339 aa25.64■■□□□ 1.7
SSNA1-202ENST00000459860 MYPNQ86TC9 1320 aa25.63■■□□□ 1.69
SSNA1-202ENST00000459860 A0A0G2JMZ2 1700 aa25.63■■□□□ 1.69
SSNA1-202ENST00000459860 NMT2O60551 498 aa25.63■■□□□ 1.69
SSNA1-202ENST00000459860 NDUFB10O96000 172 aa25.63■■□□□ 1.69
SSNA1-202ENST00000459860 CCDC178Q5BJE1 867 aa25.63■■□□□ 1.69
SSNA1-202ENST00000459860 FAM83BQ5T0W9 1011 aa25.63■■□□□ 1.69
SSNA1-202ENST00000459860 LBX2Q6XYB7 198 aa25.63■■□□□ 1.69
SSNA1-202ENST00000459860 CCAR1Q8IX12 1150 aaKnown RBP25.63■■□□□ 1.69
SSNA1-202ENST00000459860 RABGAP1Q9Y3P9 1069 aa25.63■■□□□ 1.69
SSNA1-202ENST00000459860 RBM8AQ9Y5S9 174 aaKnown RBP25.63■■□□□ 1.69
SSNA1-202ENST00000459860 RLFQ13129 1914 aa25.63■■□□□ 1.69
SSNA1-202ENST00000459860 SPDYE16A6NNV3 312 aaPredicted RBP25.62■■□□□ 1.69
SSNA1-202ENST00000459860 TNPO2O14787 897 aaKnown RBP25.62■■□□□ 1.69
SSNA1-202ENST00000459860 KDM4AO75164 1064 aa25.62■■□□□ 1.69
SSNA1-202ENST00000459860 CYP21A2P08686 494 aa25.62■■□□□ 1.69
SSNA1-202ENST00000459860 ERVK-9P63128 1117 aa25.62■■□□□ 1.69
SSNA1-202ENST00000459860 ERVK-24P63145 666 aa25.62■■□□□ 1.69
SSNA1-202ENST00000459860 SLFN13Q68D06 897 aa25.62■■□□□ 1.69
SSNA1-202ENST00000459860 SAMD1Q6SPF0 538 aaPredicted RBP25.62■■□□□ 1.69
SSNA1-202ENST00000459860 ISY1Q9ULR0 285 aaKnown RBP25.62■■□□□ 1.69
SSNA1-202ENST00000459860 B4E1Z4 1266 aa25.61■■□□□ 1.69
SSNA1-202ENST00000459860 CCNA1P78396 465 aa25.61■■□□□ 1.69
SSNA1-202ENST00000459860 MTFR1Q15390 333 aa25.61■■□□□ 1.69
SSNA1-202ENST00000459860 LSG1Q9H089 658 aaKnown RBP25.61■■□□□ 1.69
SSNA1-202ENST00000459860 CWC22Q9HCG8 908 aaKnown RBP25.61■■□□□ 1.69
SSNA1-202ENST00000459860 RBPJLQ9UBG7 517 aa25.61■■□□□ 1.69
SSNA1-202ENST00000459860 TOP1P11387 765 aaKnown RBP25.6■■□□□ 1.69
SSNA1-202ENST00000459860 DSG3P32926 999 aa25.6■■□□□ 1.69
SSNA1-202ENST00000459860 RALYLQ86SE5 291 aaKnown RBP25.6■■□□□ 1.69
SSNA1-202ENST00000459860 MB21D1Q8N884 522 aa25.6■■□□□ 1.69
SSNA1-202ENST00000459860 COA7Q96BR5 231 aa25.6■■□□□ 1.69
SSNA1-202ENST00000459860 TXNRD2Q9NNW7 524 aa25.6■■□□□ 1.69
SSNA1-202ENST00000459860 COL11A1P12107 1806 aaPredicted RBP25.59■■□□□ 1.69
SSNA1-202ENST00000459860 SHISA4Q96DD7 197 aa25.59■■□□□ 1.69
SSNA1-202ENST00000459860 TTC14Q96N46 770 aa25.59■■□□□ 1.69
SSNA1-202ENST00000459860 NUP88Q99567 741 aaPredicted RBP25.59■■□□□ 1.69
SSNA1-202ENST00000459860 UBAC1Q9BSL1 405 aa25.59■■□□□ 1.69
SSNA1-202ENST00000459860 BMP3P12645 472 aa25.58■■□□□ 1.69
SSNA1-202ENST00000459860 SLC1A4P43007 532 aa25.58■■□□□ 1.69
SSNA1-202ENST00000459860 NOVP48745 357 aa25.58■■□□□ 1.69
SSNA1-202ENST00000459860 ATG4CQ96DT6 458 aa25.58■■□□□ 1.69
SSNA1-202ENST00000459860 GMCL1Q96IK5 515 aa25.58■■□□□ 1.69
SSNA1-202ENST00000459860 ZKSCAN3Q9BRR0 538 aa25.58■■□□□ 1.69
SSNA1-202ENST00000459860 MAPK4P31152 587 aa25.57■■□□□ 1.68
SSNA1-202ENST00000459860 NCOA7Q8NI08 942 aa25.57■■□□□ 1.68
SSNA1-202ENST00000459860 SLF1Q9BQI6 1058 aa25.57■■□□□ 1.68
SSNA1-202ENST00000459860 TMEM47Q9BQJ4 181 aa25.57■■□□□ 1.68
SSNA1-202ENST00000459860 FBXO28Q9NVF7 368 aa25.57■■□□□ 1.68
SSNA1-202ENST00000459860 FEM1BQ9UK73 627 aa25.57■■□□□ 1.68
SSNA1-202ENST00000459860 PPP1R9AQ9ULJ8 1098 aa25.57■■□□□ 1.68
SSNA1-202ENST00000459860 MTMR7Q9Y216 660 aa25.57■■□□□ 1.68
SSNA1-202ENST00000459860 E7EWF7 191 aa25.56■■□□□ 1.68
SSNA1-202ENST00000459860 GRK4P32298 578 aa25.56■■□□□ 1.68
SSNA1-202ENST00000459860 IKQ13123 557 aaPredicted RBP25.56■■□□□ 1.68
SSNA1-202ENST00000459860 RNF20Q5VTR2 975 aa25.56■■□□□ 1.68
SSNA1-202ENST00000459860 DGKHQ86XP1 1220 aa25.56■■□□□ 1.68
SSNA1-202ENST00000459860 RAET1EQ8TD07 263 aa25.56■■□□□ 1.68
SSNA1-202ENST00000459860 ZSCAN10Q96SZ4 725 aaPredicted RBP25.56■■□□□ 1.68
SSNA1-202ENST00000459860 BTBD7Q9P203 1132 aa25.56■■□□□ 1.68
SSNA1-202ENST00000459860 ZSWIM5Q9P217 1185 aa25.56■■□□□ 1.68
SSNA1-202ENST00000459860 CTDP1Q9Y5B0 961 aaPredicted RBP25.56■■□□□ 1.68
SSNA1-202ENST00000459860 PEX10O60683 326 aa25.55■■□□□ 1.68
SSNA1-202ENST00000459860 CNMDO75829 334 aa25.55■■□□□ 1.68
SSNA1-202ENST00000459860 MCCP23508 829 aa25.55■■□□□ 1.68
SSNA1-202ENST00000459860 PRKCZQ05513 592 aa25.55■■□□□ 1.68
SSNA1-202ENST00000459860 PLS1Q14651 629 aa25.55■■□□□ 1.68
SSNA1-202ENST00000459860 PRPF38AQ8NAV1 312 aaKnown RBP25.55■■□□□ 1.68
SSNA1-202ENST00000459860 DCAF4Q8WV16 495 aa25.55■■□□□ 1.68
SSNA1-202ENST00000459860 TNKSO95271 1327 aa25.55■■□□□ 1.68
SSNA1-202ENST00000459860 STAT2P52630 851 aa25.54■■□□□ 1.68
SSNA1-202ENST00000459860 CCDC96Q2M329 555 aa25.54■■□□□ 1.68
SSNA1-202ENST00000459860 Q3C1V9 767 aa25.54■■□□□ 1.68
SSNA1-202ENST00000459860 WDR78Q5VTH9 848 aa25.54■■□□□ 1.68
SSNA1-202ENST00000459860 KAT14Q9H8E8 782 aa25.54■■□□□ 1.68
SSNA1-202ENST00000459860 ERICH2A1L162 156 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 TMEM232C9JQI7 657 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 SLC27A2O14975 620 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 REC8O95072 547 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 SART3Q15020 963 aaKnown RBP25.53■■□□□ 1.68
SSNA1-202ENST00000459860 CREB3L3Q68CJ9 461 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 RCSD1Q6JBY9 416 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 POTEEQ6S8J3 1075 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 FAM160B2Q86V87 743 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 NKX2-3Q8TAU0 364 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 CHURC1Q8WUH1 139 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 KIFC2Q96AC6 838 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 CHMP4CQ96CF2 233 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 SPATC1LQ9H0A9 340 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 GABRQQ9UN88 632 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 COLQQ9Y215 455 aaPredicted RBP25.53■■□□□ 1.68
SSNA1-202ENST00000459860 PLXNB2O15031 1838 aa25.53■■□□□ 1.68
SSNA1-202ENST00000459860 VWA5AO00534 786 aa25.52■■□□□ 1.68
SSNA1-202ENST00000459860 UBE2Q1Q7Z7E8 422 aa25.52■■□□□ 1.68
SSNA1-202ENST00000459860 PORCNQ9H237 461 aa25.52■■□□□ 1.68
SSNA1-202ENST00000459860 IVNS1ABPQ9Y6Y0 642 aa25.52■■□□□ 1.68
SSNA1-202ENST00000459860 DOCK3Q8IZD9 2030 aa25.52■■□□□ 1.68
SSNA1-202ENST00000459860 H0YGN5 161 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms