RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 ATG4CQ96DT6 458 aa7.74□□□□□ -1.17
DDX1-204ENST00000459706 WDR89Q96FK6 387 aaPredicted RBP7.74□□□□□ -1.17
DDX1-204ENST00000459706 RUSC1Q9BVN2 902 aa7.74□□□□□ -1.17
DDX1-204ENST00000459706 PHAXQ9H814 394 aaKnown RBP7.74□□□□□ -1.17
DDX1-204ENST00000459706 NOP53Q9NZM5 478 aaKnown RBP7.74□□□□□ -1.17
DDX1-204ENST00000459706 MKL2Q9ULH7 1088 aa7.74□□□□□ -1.17
DDX1-204ENST00000459706 ADGRB1O14514 1584 aa7.74□□□□□ -1.17
DDX1-204ENST00000459706 NRXN3Q9Y4C0 1643 aa7.74□□□□□ -1.17
DDX1-204ENST00000459706 ARHGEF28Q8N1W1 1705 aaKnown RBP7.73□□□□□ -1.17
DDX1-204ENST00000459706 DCDC2CA8MYV0 355 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 PDPK1O15530 556 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 PGRP06401 933 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 HSPA5P11021 654 aaKnown RBP7.73□□□□□ -1.17
DDX1-204ENST00000459706 ELNP15502 786 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 CDK8P49336 464 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 ETF1P62495 437 aaKnown RBP7.73□□□□□ -1.17
DDX1-204ENST00000459706 NCAPHQ15003 741 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 PPP2R5EQ16537 467 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 LINC00114Q6XXX2 140 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 NLRC3Q7RTR2 1065 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 TTC6Q86TZ1 520 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 C12orf40Q86WS4 652 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 HID1Q8IV36 788 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 SLFN12Q8IYM2 578 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 ST13P5Q8NFI4 369 aaPredicted RBP7.73□□□□□ -1.17
DDX1-204ENST00000459706 DHRS1Q96LJ7 313 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 RRAGCQ9HB90 399 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 HIF3AQ9Y2N7 669 aa7.73□□□□□ -1.17
DDX1-204ENST00000459706 ENPP3O14638 875 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 TMPRSS2O15393 492 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 DDX3YO15523 660 aaKnown RBP7.72□□□□□ -1.17
DDX1-204ENST00000459706 DLGAP3O95886 979 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 HSP90B1P14625 803 aaKnown RBP7.72□□□□□ -1.17
DDX1-204ENST00000459706 GRK4P32298 578 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 BBS9Q3SYG4 887 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 ZBTB37Q5TC79 503 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 EGFLAMQ63HQ2 1017 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 MRPL41Q8IXM3 137 aaKnown RBP7.72□□□□□ -1.17
DDX1-204ENST00000459706 EPN3Q9H201 632 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 GSX1Q9H4S2 264 aaPredicted RBP7.72□□□□□ -1.17
DDX1-204ENST00000459706 PICK1Q9NRD5 415 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 KCNK4Q9NYG8 393 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 CORINQ9Y5Q5 1042 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 QRICH2Q9H0J4 1663 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 DLC1Q96QB1 1528 aa7.72□□□□□ -1.17
DDX1-204ENST00000459706 SBNO2Q9Y2G9 1366 aa7.71□□□□□ -1.17
DDX1-204ENST00000459706 SOX4Q06945 474 aaPredicted RBP7.71□□□□□ -1.18
DDX1-204ENST00000459706 PRRT3Q5FWE3 981 aa7.71□□□□□ -1.18
DDX1-204ENST00000459706 ZNF385CQ66K41 422 aaPredicted RBP7.71□□□□□ -1.18
DDX1-204ENST00000459706 ANKRD34AQ69YU3 496 aa7.71□□□□□ -1.18
DDX1-204ENST00000459706 CDC37L1Q7L3B6 337 aa7.71□□□□□ -1.18
DDX1-204ENST00000459706 ANKLE2Q86XL3 938 aa7.71□□□□□ -1.18
DDX1-204ENST00000459706 PLVAPQ9BX97 442 aa7.71□□□□□ -1.18
DDX1-204ENST00000459706 TNKS2Q9H2K2 1166 aa7.71□□□□□ -1.18
DDX1-204ENST00000459706 MAPK8IP1Q9UQF2 711 aa7.71□□□□□ -1.18
DDX1-204ENST00000459706 PIK3R4Q99570 1358 aa7.71□□□□□ -1.18
DDX1-204ENST00000459706 MED14O60244 1454 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 CPS1P31327 1500 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 ASXL1Q8IXJ9 1541 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 PRAMEF27A3QJZ7 478 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 LARP1BQ659C4 914 aaKnown RBP7.7□□□□□ -1.18
DDX1-204ENST00000459706 OVOS1Q6IE37 1185 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 SVOPQ8N4V2 548 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 CELF2-AS1Q8N7Q2 184 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 ACSF2Q96CM8 615 aaPredicted RBP7.7□□□□□ -1.18
DDX1-204ENST00000459706 TRIM11Q96F44 468 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 FANCD2OSQ96PS1 177 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 DISC1Q9NRI5 854 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 PPP1R9AQ9ULJ8 1098 aa7.7□□□□□ -1.18
DDX1-204ENST00000459706 YTHDC2Q9H6S0 1430 aaKnown RBP7.69□□□□□ -1.18
DDX1-204ENST00000459706 DDAH1O94760 285 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 ARHGEF15O94989 841 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 RAG1P15918 1043 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 ZNF143P52747 638 aaPredicted RBP7.69□□□□□ -1.18
DDX1-204ENST00000459706 TMF1P82094 1093 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 ZC3H12BQ5HYM0 836 aaKnown RBP7.69□□□□□ -1.18
DDX1-204ENST00000459706 AKAP4Q5JQC9 854 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 TREML4Q6UXN2 200 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 UNC5AQ6ZN44 842 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 KIAA1211Q6ZU35 1233 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.69□□□□□ -1.18
DDX1-204ENST00000459706 JAZF1Q86VZ6 243 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 FAM178BQ8IXR5 827 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 NLGN1Q8N2Q7 840 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 JMYQ8N9B5 988 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 UBASH3BQ8TF42 649 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 TMEM87BQ96K49 555 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 ANTXR1Q9H6X2 564 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 LRPPRCP42704 1394 aaKnown RBP7.69□□□□□ -1.18
DDX1-204ENST00000459706 TECPR2O15040 1411 aa7.69□□□□□ -1.18
DDX1-204ENST00000459706 ST20-MTHFSA0A0A6YYL1 179 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 FAM221BA6H8Z2 402 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 RGS13O14921 159 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 TIAF1O95411 115 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 NAT2P11245 290 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 ADH5P11766 374 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 CHMP4BP1P59074 171 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 LONRF2Q1L5Z9 754 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 ARSHQ5FYA8 562 aa7.68□□□□□ -1.18
DDX1-204ENST00000459706 PPM1JQ5JR12 505 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms