RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 MCCP23508 829 aa30.33■■■□□ 2.45
SEMA3C-205ENST00000458729 MCM5P33992 734 aa30.33■■■□□ 2.45
SEMA3C-205ENST00000458729 LACTBP83111 547 aaPredicted RBP30.33■■■□□ 2.45
SEMA3C-205ENST00000458729 RASEFQ8IZ41 740 aa30.33■■■□□ 2.45
SEMA3C-205ENST00000458729 DCAF4Q8WV16 495 aa30.33■■■□□ 2.45
SEMA3C-205ENST00000458729 KAT14Q9H8E8 782 aa30.33■■■□□ 2.45
SEMA3C-205ENST00000458729 RABGAP1Q9Y3P9 1069 aa30.33■■■□□ 2.45
SEMA3C-205ENST00000458729 IFIT3O14879 490 aaKnown RBP30.32■■■□□ 2.44
SEMA3C-205ENST00000458729 SEC23AQ15436 765 aa30.32■■■□□ 2.44
SEMA3C-205ENST00000458729 IFIT1BQ5T764 474 aaKnown RBP30.32■■■□□ 2.44
SEMA3C-205ENST00000458729 GPRC5AQ8NFJ5 357 aa30.32■■■□□ 2.44
SEMA3C-205ENST00000458729 CD99L2Q8TCZ2 262 aa30.32■■■□□ 2.44
SEMA3C-205ENST00000458729 RBPJLQ9UBG7 517 aa30.32■■■□□ 2.44
SEMA3C-205ENST00000458729 FEM1BQ9UK73 627 aa30.32■■■□□ 2.44
SEMA3C-205ENST00000458729 MB21D1Q8N884 522 aa30.31■■■□□ 2.44
SEMA3C-205ENST00000458729 NEK1Q96PY6 1258 aa30.31■■■□□ 2.44
SEMA3C-205ENST00000458729 PPP1R9AQ9ULJ8 1098 aa30.31■■■□□ 2.44
SEMA3C-205ENST00000458729 ANTXR2P58335 489 aa30.3■■■□□ 2.44
SEMA3C-205ENST00000458729 PRPF38AQ8NAV1 312 aaKnown RBP30.3■■■□□ 2.44
SEMA3C-205ENST00000458729 PNMA1Q8ND90 353 aa30.3■■■□□ 2.44
SEMA3C-205ENST00000458729 SLF1Q9BQI6 1058 aa30.3■■■□□ 2.44
SEMA3C-205ENST00000458729 PAGR1Q9BTK6 254 aa30.3■■■□□ 2.44
SEMA3C-205ENST00000458729 PRC1O43663 620 aa30.29■■■□□ 2.44
SEMA3C-205ENST00000458729 WTAPQ15007 396 aa30.29■■■□□ 2.44
SEMA3C-205ENST00000458729 CHST3Q7LGC8 479 aa30.29■■■□□ 2.44
SEMA3C-205ENST00000458729 CHURC1Q8WUH1 139 aa30.29■■■□□ 2.44
SEMA3C-205ENST00000458729 TXNRD2Q9NNW7 524 aa30.29■■■□□ 2.44
SEMA3C-205ENST00000458729 FBXO28Q9NVF7 368 aa30.29■■■□□ 2.44
SEMA3C-205ENST00000458729 ISY1Q9ULR0 285 aaKnown RBP30.29■■■□□ 2.44
SEMA3C-205ENST00000458729 MTMR7Q9Y216 660 aa30.29■■■□□ 2.44
SEMA3C-205ENST00000458729 TMEM232C9JQI7 657 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 PLA2G6O60733 806 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 HMGB1P09429 215 aaKnown RBP30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 ERVK-9P63128 1117 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 ERVK-24P63145 666 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 TMEM67Q5HYA8 995 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 POTEEQ6S8J3 1075 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 SAMD1Q6SPF0 538 aaPredicted RBP30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 CTU1Q7Z7A3 348 aaKnown RBP30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 FAM160B2Q86V87 743 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 ATG4CQ96DT6 458 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 TMEM87BQ96K49 555 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 ADAMTS5Q9UNA0 930 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 SNX14Q9Y5W7 946 aa30.28■■■□□ 2.44
SEMA3C-205ENST00000458729 GNRH1P01148 92 aa30.27■■■□□ 2.44
SEMA3C-205ENST00000458729 PDHBP11177 359 aa30.27■■■□□ 2.44
SEMA3C-205ENST00000458729 STAT2P52630 851 aa30.27■■■□□ 2.44
SEMA3C-205ENST00000458729 CCDC96Q2M329 555 aa30.27■■■□□ 2.44
SEMA3C-205ENST00000458729 IGDCC4Q8TDY8 1250 aa30.27■■■□□ 2.44
SEMA3C-205ENST00000458729 EFCC1Q9HA90 598 aa30.27■■■□□ 2.44
SEMA3C-205ENST00000458729 RLFQ13129 1914 aa30.27■■■□□ 2.44
SEMA3C-205ENST00000458729 CNMDO75829 334 aa30.26■■■□□ 2.44
SEMA3C-205ENST00000458729 SNHG28P0DPA3 235 aa30.26■■■□□ 2.44
SEMA3C-205ENST00000458729 PSMC4P43686 418 aa30.26■■■□□ 2.44
SEMA3C-205ENST00000458729 FCGRTP55899 365 aa30.26■■■□□ 2.44
SEMA3C-205ENST00000458729 CCNA1P78396 465 aa30.26■■■□□ 2.44
SEMA3C-205ENST00000458729 ADCK5Q3MIX3 580 aa30.26■■■□□ 2.44
SEMA3C-205ENST00000458729 KCTD1Q719H9 257 aa30.26■■■□□ 2.44
SEMA3C-205ENST00000458729 TMTC2Q8N394 836 aa30.26■■■□□ 2.44
SEMA3C-205ENST00000458729 CHMP4CQ96CF2 233 aa30.26■■■□□ 2.44
SEMA3C-205ENST00000458729 WDR19Q8NEZ3 1342 aa30.26■■■□□ 2.43
SEMA3C-205ENST00000458729 VWA5AO00534 786 aa30.25■■■□□ 2.43
SEMA3C-205ENST00000458729 IKQ13123 557 aaPredicted RBP30.25■■■□□ 2.43
SEMA3C-205ENST00000458729 Q3C1V9 767 aa30.25■■■□□ 2.43
SEMA3C-205ENST00000458729 DHX32Q7L7V1 743 aaKnown RBP30.25■■■□□ 2.43
SEMA3C-205ENST00000458729 BTBD7Q9P203 1132 aa30.25■■■□□ 2.43
SEMA3C-205ENST00000458729 FMNL1O95466 1100 aaPredicted RBP30.24■■■□□ 2.43
SEMA3C-205ENST00000458729 FDX1P10109 184 aa30.24■■■□□ 2.43
SEMA3C-205ENST00000458729 PSMA5P28066 241 aa30.24■■■□□ 2.43
SEMA3C-205ENST00000458729 GPATCH4Q5T3I0 446 aaKnown RBP30.24■■■□□ 2.43
SEMA3C-205ENST00000458729 KIFC2Q96AC6 838 aa30.24■■■□□ 2.43
SEMA3C-205ENST00000458729 ARHGAP39Q9C0H5 1083 aa30.24■■■□□ 2.43
SEMA3C-205ENST00000458729 TRIM17Q9Y577 477 aa30.24■■■□□ 2.43
SEMA3C-205ENST00000458729 PEX10O60683 326 aa30.23■■■□□ 2.43
SEMA3C-205ENST00000458729 HOXD10P28358 340 aa30.23■■■□□ 2.43
SEMA3C-205ENST00000458729 ZNF543Q08ER8 600 aa30.23■■■□□ 2.43
SEMA3C-205ENST00000458729 PKN2Q16513 984 aaKnown RBP30.23■■■□□ 2.43
SEMA3C-205ENST00000458729 C8orf34Q49A92 452 aa30.23■■■□□ 2.43
SEMA3C-205ENST00000458729 COL13A1Q5TAT6 717 aaPredicted RBP30.23■■■□□ 2.43
SEMA3C-205ENST00000458729 OTOP1Q7RTM1 612 aa30.23■■■□□ 2.43
SEMA3C-205ENST00000458729 PARP14Q460N5 1801 aa30.23■■■□□ 2.43
SEMA3C-205ENST00000458729 ZBED4O75132 1171 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 LIFRP42702 1097 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 EXOSC10Q01780 885 aaKnown RBP30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 BTNL9Q6UXG8 535 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 RASGRP2Q7LDG7 609 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 CCAR1Q8IX12 1150 aaKnown RBP30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 TRIM47Q96LD4 638 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 JAKMIP1Q96N16 626 aaKnown RBP30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 LY9Q9HBG7 655 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 CTDP1Q9Y5B0 961 aaPredicted RBP30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 SH2B2O14492 632 aaPredicted RBP30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 CTGFP29279 349 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 MAPK4P31152 587 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 CAP1Q01518 475 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 COL9A3Q14050 684 aaPredicted RBP30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 SPATC1LQ9H0A9 340 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 GPCPD1Q9NPB8 672 aa30.22■■■□□ 2.43
SEMA3C-205ENST00000458729 FRMPD2Q68DX3 1309 aaPredicted RBP30.21■■■□□ 2.43
SEMA3C-205ENST00000458729 TNPO2O14787 897 aaKnown RBP30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms