RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 BMP3P12645 472 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 RXRAP19793 462 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 SLC1A4P43007 532 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 ZNF543Q08ER8 600 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 GRM4Q14833 912 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 MICU3Q86XE3 530 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 IL27Q8NEV9 243 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 NUP133Q8WUM0 1156 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 PTPN18Q99952 460 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 RPAP3Q9H6T3 665 aaPredicted RBP19.68■□□□□ 0.74
TRIM39-211ENST00000458516 TPCN1Q9ULQ1 816 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 NID2Q14112 1375 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 A0A0G2JMZ2 1700 aa19.68■□□□□ 0.74
TRIM39-211ENST00000458516 MYH6P13533 1939 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 GOLGA8BA8MQT2 603 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 ZBTB43O43298 467 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 ST18O60284 1047 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 RCAN1P53805 252 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 CCDC96Q2M329 555 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 KCTD1Q719H9 257 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 NOL8Q76FK4 1167 aaKnown RBP19.67■□□□□ 0.74
TRIM39-211ENST00000458516 ANKRD23Q86SG2 305 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 MAP3K14Q99558 947 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 HPS5Q9UPZ3 1129 aa19.67■□□□□ 0.74
TRIM39-211ENST00000458516 FRMPD2Q68DX3 1309 aaPredicted RBP19.67■□□□□ 0.74
TRIM39-211ENST00000458516 BAZ2BQ9UIF8 2168 aaKnown RBP19.67■□□□□ 0.74
TRIM39-211ENST00000458516 IGF2BP3O00425 579 aaKnown RBP eCLIP19.66■□□□□ 0.74
TRIM39-211ENST00000458516 LARGE1O95461 756 aa19.66■□□□□ 0.74
TRIM39-211ENST00000458516 CALM1P0DP23 149 aa19.66■□□□□ 0.74
TRIM39-211ENST00000458516 CALM2P0DP24 149 aa19.66■□□□□ 0.74
TRIM39-211ENST00000458516 CALM3P0DP25 149 aa19.66■□□□□ 0.74
TRIM39-211ENST00000458516 PDIA3P30101 505 aaKnown RBP19.66■□□□□ 0.74
TRIM39-211ENST00000458516 HOXA7P31268 230 aaPredicted RBP19.66■□□□□ 0.74
TRIM39-211ENST00000458516 SREBF2Q12772 1141 aa19.66■□□□□ 0.74
TRIM39-211ENST00000458516 ASPRV1Q53RT3 343 aa19.66■□□□□ 0.74
TRIM39-211ENST00000458516 SYNE3Q6ZMZ3 975 aa19.66■□□□□ 0.74
TRIM39-211ENST00000458516 FAM43AQ8N2R8 423 aa19.66■□□□□ 0.74
TRIM39-211ENST00000458516 ZNF274Q96GC6 653 aaPredicted RBP19.66■□□□□ 0.74
TRIM39-211ENST00000458516 MAD2L2Q9UI95 211 aa19.66■□□□□ 0.74
TRIM39-211ENST00000458516 NAP1L2Q9ULW6 460 aaPredicted RBP19.66■□□□□ 0.74
TRIM39-211ENST00000458516 PALM3A6NDB9 673 aaPredicted RBP19.65■□□□□ 0.74
TRIM39-211ENST00000458516 GOLGA8AA7E2F4 631 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 USP17L15C9J2P7 530 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 USP17L13C9JLJ4 530 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 USP17L11C9JVI0 530 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 USP17L18D6R9N7 530 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 USP17L22D6RA61 530 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 USP17L17D6RBQ6 530 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 USP17L19D6RCP7 530 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 USP17L20D6RJB6 530 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 PARP1P09874 1014 aaKnown RBP19.65■□□□□ 0.74
TRIM39-211ENST00000458516 GOLGA8HP0CJ92 632 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 TM4SF4P48230 202 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 INHBEP58166 350 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 USP17L24Q0WX57 530 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 GPATCH4Q5T3I0 446 aaKnown RBP19.65■□□□□ 0.74
TRIM39-211ENST00000458516 CATSPERGQ6ZRH7 1159 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 IFNL1Q8IU54 200 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 CCDC144CPQ8IYA2 1237 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 STAG2Q8N3U4 1231 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 TANGO6Q9C0B7 1094 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 GPCPD1Q9NPB8 672 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 SLC45A1Q9Y2W3 748 aa19.65■□□□□ 0.74
TRIM39-211ENST00000458516 TMEM232C9JQI7 657 aa19.64■□□□□ 0.73
TRIM39-211ENST00000458516 PDHXO00330 501 aa19.64■□□□□ 0.73
TRIM39-211ENST00000458516 MAP2K2P36507 400 aa19.64■□□□□ 0.73
TRIM39-211ENST00000458516 METAP2P50579 478 aaKnown RBP eCLIP19.64■□□□□ 0.73
TRIM39-211ENST00000458516 TTBK2Q6IQ55 1244 aa19.64■□□□□ 0.73
TRIM39-211ENST00000458516 FANCBQ8NB91 859 aa19.64■□□□□ 0.73
TRIM39-211ENST00000458516 CTCFLQ8NI51 663 aaPredicted RBP19.64■□□□□ 0.73
TRIM39-211ENST00000458516 FAM217BQ9NTX9 383 aaPredicted RBP19.64■□□□□ 0.73
TRIM39-211ENST00000458516 FBXO28Q9NVF7 368 aa19.64■□□□□ 0.73
TRIM39-211ENST00000458516 ISY1Q9ULR0 285 aaKnown RBP19.64■□□□□ 0.73
TRIM39-211ENST00000458516 CDC27P30260 824 aa19.63■□□□□ 0.73
TRIM39-211ENST00000458516 PABPC4Q13310 644 aaKnown RBP eCLIP19.63■□□□□ 0.73
TRIM39-211ENST00000458516 ME3Q16798 604 aa19.63■□□□□ 0.73
TRIM39-211ENST00000458516 RTN1Q16799 776 aa19.63■□□□□ 0.73
TRIM39-211ENST00000458516 BTNL9Q6UXG8 535 aa19.63■□□□□ 0.73
TRIM39-211ENST00000458516 REM2Q8IYK8 340 aaPredicted RBP19.63■□□□□ 0.73
TRIM39-211ENST00000458516 ZCCHC17Q9NP64 241 aaKnown RBP19.63■□□□□ 0.73
TRIM39-211ENST00000458516 FEM1BQ9UK73 627 aa19.63■□□□□ 0.73
TRIM39-211ENST00000458516 LIMCH1Q9UPQ0 1083 aa19.63■□□□□ 0.73
TRIM39-211ENST00000458516 PLA2G6O60733 806 aa19.62■□□□□ 0.73
TRIM39-211ENST00000458516 PFKFB2O60825 505 aa19.62■□□□□ 0.73
TRIM39-211ENST00000458516 FLOT1O75955 427 aa19.62■□□□□ 0.73
TRIM39-211ENST00000458516 KIF5BP33176 963 aa19.62■□□□□ 0.73
TRIM39-211ENST00000458516 STAT2P52630 851 aa19.62■□□□□ 0.73
TRIM39-211ENST00000458516 STK3Q13188 491 aa19.62■□□□□ 0.73
TRIM39-211ENST00000458516 SLC35G1Q2M3R5 365 aa19.62■□□□□ 0.73
TRIM39-211ENST00000458516 FAM160B2Q86V87 743 aa19.62■□□□□ 0.73
TRIM39-211ENST00000458516 ASCC2Q9H1I8 757 aaPredicted RBP19.62■□□□□ 0.73
TRIM39-211ENST00000458516 CPVLQ9H3G5 476 aa19.62■□□□□ 0.73
TRIM39-211ENST00000458516 RBM28Q9NW13 759 aaKnown RBP19.62■□□□□ 0.73
TRIM39-211ENST00000458516 SPDYE16A6NNV3 312 aaPredicted RBP19.61■□□□□ 0.73
TRIM39-211ENST00000458516 KLRF2D3W0D1 207 aa19.61■□□□□ 0.73
TRIM39-211ENST00000458516 PLEKHA8P1O95397 391 aa19.61■□□□□ 0.73
TRIM39-211ENST00000458516 OSBPP22059 807 aa19.61■□□□□ 0.73
TRIM39-211ENST00000458516 DSG3P32926 999 aa19.61■□□□□ 0.73
TRIM39-211ENST00000458516 SLC16A2P36021 539 aa19.61■□□□□ 0.73
TRIM39-211ENST00000458516 CCT2P78371 535 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms